CuGenDBv2

Gene ID	Moc04g40090
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NADH-ubiquinone oxidoreductase chain 3
Genome location	chr4:29769342..29770526
RNA-Seq Expression	Moc04g40090
Synteny	Moc04g40090
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022900 - electron transport chain (biological process) GO:0009507 - chloroplast (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AEN56123.1 NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]

1.9e-12

84.44

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Query:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        A++   ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

KAA0065512.1 ribosomal protein S12C [Cucumis melo var. makuwa]

1.9e-12

84.44

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Query:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        A++   ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

XP_023545342.1 uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo]

2.5e-12

94.87

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

YP_009241665.1 NADH dehydrogenase subunit 3 [Ziziphus jujuba]

2.5e-12

94.87

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

YP_009565394.1 NADH dehydrogenase subunit 3 [Morus notabilis]

2.5e-12

94.87

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

TrEMBL top hits

e value

%identity

Alignment

A0A142BZ04 NADH-ubiquinone oxidoreductase chain 3

1.2e-12

94.87

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

A0A3Q9CSW0 NADH-ubiquinone oxidoreductase chain 3

9.4e-13

84.44

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Query:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        A++   ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

A0A5A7VB34 NADH dehydrogenase subunit 3

9.4e-13

84.44

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Query:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        A++   ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

A0A7D5XZ34 NADH-ubiquinone oxidoreductase chain 3

1.2e-12

94.87

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

G3EU38 NADH-ubiquinone oxidoreductase chain 3

9.4e-13

84.44

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Query:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        A++   ++AYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
Subjt:  ASFFRWIAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

SwissProt top hits

e value

%identity

Alignment

O99869 NADH-ubiquinone oxidoreductase chain 3

1.5e-12

89.47

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Query:  AAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        +AYECG DPSGDARSR DIRFYLVSILFII DPEVTFS
Subjt:  AAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

P16265 NADH-ubiquinone oxidoreductase chain 3

2.6e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

P27062 NADH-ubiquinone oxidoreductase chain 3

2.1e-14

92.31

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS
        ++AYECGFDPSGDARSRFDIRFYLVSILFII DPEVTFS
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFS

P60159 NADH-ubiquinone oxidoreductase chain 3

2.6e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Q96007 NADH-ubiquinone oxidoreductase chain 3

2.6e-12

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDP GDARSRFDIRFYLVSILFII D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

1.4e-13

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILF+I D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein

1.6e-04

39.47

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        +++YE G +P GDA  +F IR+Y+ +++F++ D E  F
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

ATMG00990.1 NADH dehydrogenase 3

1.4e-13

86.84

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Query:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF
        ++AYECGFDPSGDARSRFDIRFYLVSILF+I D EVTF
Subjt:  IAAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTF

Sequences

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CDS sequence

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ATGACAGTCGATCCCGTTCCTCTGTTCACACTCCTGCGCGAGGAAGGGAACGACCACCTCTCCAATTCTGCGAAGCAAATGGGTCAAGAAGTAACAGGGTTGCAGGCAAA
ACTGAATGAGACCTTGAATGCCCGAGCAAAGGGTCAGCAACTCCGCTGCACTAAACTCCAGGGTCGACGGGTGTGTAAACTGAGCAATAAGAGGGGACCCACGCCTAGGG
ATATACAAGCGTCATTCTTCAGATGGATCGCTGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTA
TTTATTATCCTTGATCCGGAAGTAACCTTTTCGGGAAGAGGAAATCAGGATGCTGGGCAAACGGGAAGGAAAATGAATGTGTAA

mRNA sequence

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Protein sequence

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MTVDPVPLFTLLREEGNDHLSNSAKQMGQEVTGLQAKLNETLNARAKGQQLRCTKLQGRRVCKLSNKRGPTPRDIQASFFRWIAAYECGFDPSGDARSRFDIRFYLVSIL
FIILDPEVTFSGRGNQDAGQTGRKMNV

Moc04g40090 (gene) of Bitter gourd (OHB3-1) v2 genome