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Moc05g01200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g01200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationchr5:781245..782254
RNA-Seq ExpressionMoc05g01200
SyntenyMoc05g01200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]2.2e-4176.42Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS         
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG

Query:  GVSDCIPDCFDATTTYREVQRSV
                C   TTT R+VQRSV
Subjt:  GVSDCIPDCFDATTTYREVQRSV

KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3483.16Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI
        M GDS+ VNG  E+ VDS AAGEVGDH NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCS  ++
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI

XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]1.1e-3792.13Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS

XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]2.2e-4176.42Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS         
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG

Query:  GVSDCIPDCFDATTTYREVQRSV
                C   TTT R+VQRSV
Subjt:  GVSDCIPDCFDATTTYREVQRSV

XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]1.7e-3891.21Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSKDVNGC+EK +DS A GEVGDHSNGE+YSESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS

TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein5.4e-3892.13Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        GDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS

A0A1S3AX40 uncharacterized protein LOC103483558 isoform X21.1e-4176.42Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS         
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG

Query:  GVSDCIPDCFDATTTYREVQRSV
                C   TTT R+VQRSV
Subjt:  GVSDCIPDCFDATTTYREVQRSV

A0A5A7U1V8 Uncharacterized protein1.1e-4176.42Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS         
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLG

Query:  GVSDCIPDCFDATTTYREVQRSV
                C   TTT R+VQRSV
Subjt:  GVSDCIPDCFDATTTYREVQRSV

A0A6J1EBY1 uncharacterized protein LOC1114317935.6e-3583.16Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI
        M GDS+ VNG  E+ VDS AAGEVGDH NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCS  ++
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI

A0A6J1INK9 uncharacterized protein LOC1114791202.8e-3482.11Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI
        M GDS+ VNG  E+ VDS AAGEVGDH N ED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCS  ++
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33390.1 unknown protein3.8e-2047.31Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI
        G+ K+ NGC+ K + S+ + E+ D    E+ SES  LLPPR+GGMSR +DK +  V+WND  G+NLAE+L ++PS+VSD+ D+++DSC  +++
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCGATTCTAAGGACGTTAATGGCTGCCAAGAGAAGCCCGTGGATTCTGTCGCCGCCGGAGAAGTTGGGGATCACAGTAATGGAGAAGATTACAGCGAATCGAA
TGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGCGGAAATCGGACAAGCCGAGGATGAAAGTCCGGTGGAACGATAGTAATGGCAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGCGATGTGAGCGACTCCGGGGACGAGGAGGCCGATTCTTGCAGCTTGTCATTAATTCTACTTTCTCTTGGTGGTGTTTCTGACTGTATACCGGATTGCTTT
GATGCTACAACGACCTACAGAGAAGTTCAAAGATCGGTTGATTACTATGCCATCATCTCATTGTCCCTTGTGCCGCTGATGTGTCCCGGTGACACCTTGTACTGTTTCGG
TCTTCAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCGATTCTAAGGACGTTAATGGCTGCCAAGAGAAGCCCGTGGATTCTGTCGCCGCCGGAGAAGTTGGGGATCACAGTAATGGAGAAGATTACAGCGAATCGAA
TGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGCGGAAATCGGACAAGCCGAGGATGAAAGTCCGGTGGAACGATAGTAATGGCAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGCGATGTGAGCGACTCCGGGGACGAGGAGGCCGATTCTTGCAGCTTGTCATTAATTCTACTTTCTCTTGGTGGTGTTTCTGACTGTATACCGGATTGCTTT
GATGCTACAACGACCTACAGAGAAGTTCAAAGATCGGTTGATTACTATGCCATCATCTCATTGTCCCTTGTGCCGCTGATGTGTCCCGGTGACACCTTGTACTGTTTCGG
TCTTCAAATTTGA
Protein sequenceShow/hide protein sequence
MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSLSLILLSLGGVSDCIPDCF
DATTTYREVQRSVDYYAIISLSLVPLMCPGDTLYCFGLQI