; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g02260 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g02260
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L37a
Genome locationchr5:1504335..1506724
RNA-Seq ExpressionMoc05g02260
SyntenyMoc05g02260
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC26760.1 hypothetical protein L484_023376 [Morus notabilis]2.1e-4396.88Show/hide
Query:  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TLA  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAG8484324.1 hypothetical protein CXB51_023812 [Gossypium anomalum]1.2e-4394.06Show/hide
Query:  GALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        GA  L+ A+ TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  GALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Query:  S
        S
Subjt:  S

ONK59155.1 uncharacterized protein A4U43_C08F3550 [Asparagus officinalis]5.4e-4494.95Show/hide
Query:  LSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        L + LAS TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  LSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

VVA26227.1 PREDICTED: 60S ribosomal [Prunus dulcis]2.7e-4398.92Show/hide
Query:  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        S+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

XP_022974725.1 uncharacterized protein LOC111473462 isoform X8 [Cucurbita maxima]1.3e-4881.68Show/hide
Query:  RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
        +R +R FPLGRSVSAPA LQ C              +++ TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Subjt:  RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG

Query:  KVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hitse value%identityAlignment
A0A1U8HID4 60S ribosomal protein L37a isoform X11.3e-4392.16Show/hide
Query:  NGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT
        N + S    +RTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT
Subjt:  NGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT

Query:  ES
        ES
Subjt:  ES

A0A3Q7HRS0 MI domain-containing protein5.9e-4488.99Show/hide
Query:  LNNGAL-----SLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI
        L NG L      L+L + TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI
Subjt:  LNNGAL-----SLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI

Query:  RRLREQTES
        RRLREQTES
Subjt:  RRLREQTES

A0A5E4FEE5 PREDICTED: 60S ribosomal1.3e-4398.92Show/hide
Query:  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        S+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A6J1IEQ2 uncharacterized protein LOC111473462 isoform X86.1e-4981.68Show/hide
Query:  RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
        +R +R FPLGRSVSAPA LQ C              +++ TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG
Subjt:  RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG

Query:  KVKAGGAYTLNTASAVTVRSTIRRLREQTES
        KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KVKAGGAYTLNTASAVTVRSTIRRLREQTES

W9SDH6 Uncharacterized protein1.0e-4396.88Show/hide
Query:  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TLA  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-11.5e-4496.7Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-21.5e-4496.7Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-12.8e-4394.51Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a1.1e-4498.9Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a1.3e-4396.67Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein2.0e-4494.51Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein9.9e-4494.38Show/hide
Query:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCGCCGGAGGATTTCTAGGGTTTTCCCGCTTGGCCGTTCAGTCTCTGCACCAGCGTTTCTTCAGGCGTGCTCGTTGCTGCTAATCCTCAACAATGGTGCTCTCTC
TCTCACTCTCGCTTCTAGGACGAAGAGAACCAAGAAGGCTGGAATTGTCGGGAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCA
GTCAGCACAGCAAATACTTCTGCGAGTTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCAGGAGGTGCC
TACACTTTGAACACTGCAAGTGCCGTTACCGTTCGGAGCACGATCCGAAGGCTGAGGGAGCAGACTGAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCGCCGGAGGATTTCTAGGGTTTTCCCGCTTGGCCGTTCAGTCTCTGCACCAGCGTTTCTTCAGGCGTGCTCGTTGCTGCTAATCCTCAACAATGGTGCTCTCTC
TCTCACTCTCGCTTCTAGGACGAAGAGAACCAAGAAGGCTGGAATTGTCGGGAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCA
GTCAGCACAGCAAATACTTCTGCGAGTTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCAGGAGGTGCC
TACACTTTGAACACTGCAAGTGCCGTTACCGTTCGGAGCACGATCCGAAGGCTGAGGGAGCAGACTGAGAGCTAA
Protein sequenceShow/hide protein sequence
MQRRRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGA
YTLNTASAVTVRSTIRRLREQTES