; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g02630 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g02630
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:1793280..1795129
RNA-Seq ExpressionMoc05g02630
SyntenyMoc05g02630
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]9.9e-16454.31Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++    K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E +  + E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]4.5e-16454.48Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++  L K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E +  + E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

TYK25585.1 uncharacterized protein E5676_scaffold352G007440 [Cucumis melo var. makuwa]9.9e-16454.31Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++    K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E + ++ E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]2.1e-28691.76Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----
        MS TKQLSKSH+DRLVEIEEQLLYLR VPD LRLLEARVDEFSEKFGEIDAVNAR+D LPIQDIAMRVETLESKATRPGSFE GDSSTNPNTQIEV    
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----

Query:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
                            +TIDTLRAEMTEI+TRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
Subjt:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT

Query:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART
        LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVM+DIRDMSEKDKVFVFI+GLK WART
Subjt:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART

Query:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL
        KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQR MS FLCKGPHRVAECPHRAAL
Subjt:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL

Query:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK
        TALQASVQSCNEPEVETDCEKEEDEETPRM ALKFL AIQKRVNGPKGTSEKGLMFVDATINCN AKST+VDSGATHNFISEQEARRLKLTIEKDTGKMK
Subjt:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK

Query:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
         VN EALPIVGVS RVMLKLGTWT SVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]4.2e-27989.78Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----
        MSATKQLSKSH+DRLVEIEEQLLYLR VPDSLRLLEARVDEFSEKFGEIDAVNARVD LPIQDIAMRVET ESKATRPGSFE GDSSTNPNTQIEV    
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----

Query:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
                            +TIDTLRAEMTEI+TRVNLTMRAVGNQAPNQ NMGFNKLKVPEPKPFNGNR  KDLENF FDVEQYFK TGT SE MKVT
Subjt:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT

Query:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART
        LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFF DNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLK WART
Subjt:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART

Query:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL
        KLYEQRVQDLATAMA+AERLLDY+SEPSHPKKNATNPTGGNKTFKPFTPK GGADKRP GPNPGPSRGPYPQSQNAQRP SCFLC+GPH+VAECPHRAAL
Subjt:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL

Query:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK
        TALQASVQSCNEPEV TDCEKEEDEETPRMGALKFL AIQKRVNGPKGTSEKGLMFVDA INCNPAKS +VDSGATHNFISEQEA RLKLTIEKDTGKMK
Subjt:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK

Query:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        AVNSEALPIVGVS RV LKLGTWT S DFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

TrEMBL top hitse value%identityAlignment
A0A5A7UIP7 Reverse transcriptase4.8e-16454.31Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++    K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E +  + E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A5D3BYE6 Reverse transcriptase2.2e-16454.48Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++  L K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E +  + E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A5D3DQ20 Retrotrans_gag domain-containing protein4.8e-16454.31Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--
        MS++    K+  DRLVE+EEQ+LYL  VPDS+R LE+R++E SEK   IDAV  RV+  PIQ++  RV+ LE+     R  ++E GDSST     IE   
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKAT--RPGSFELGDSSTNPNTQIEV--

Query:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK
                               T+D +R E+ ++N R++LTMRA+ NQAP    +  +++K+PEPKPF G RDAK LEN++FD+EQYF+AT T +EE K
Subjt:  ----------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMK

Query:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA
        VTLATMHL++DAKLWWRS+  DIQ GRCTI++WD LK+ELR QFFP+NVE +ARRKLREL+HTG+IR+YVKQF+ +MLDIRDMSEKDKVF F+EGLKPWA
Subjt:  VTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWA

Query:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA
        +TKLYEQRVQDL +A AAAERL D +++    +++ ++ +GG++  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   
Subjt:  RTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQG------PNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVA

Query:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK
        ECP++ A  A QAS+ S +   + + E + ++ E+ + PRMGALKFL ++QK+V       E+GLM+VD  IN  P KST+VDSGATHNFI+E EA+RL 
Subjt:  ECPHRAALTALQASVQSCN---EPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLK

Query:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        L  EKD G+MKAVNS ALPI+G+  R M++LG W+  VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  LTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A6J1D906 Reverse transcriptase7.6e-28791.94Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----
        MS TKQLSKSH+DRLVEIEEQLLYLR VPD LRLLEARVDEFSEKFGEIDAVNAR+D LPIQDIAMRVETLESKATRPGSFE GDSSTNPNTQIEV    
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----

Query:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
                            +TIDTLRAEMTEI+TRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
Subjt:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT

Query:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART
        LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVM+DIRDMSEKDKVFVFIEGLK WART
Subjt:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART

Query:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL
        KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQR MS FLCKGPHRVAECPHRAAL
Subjt:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL

Query:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK
        TALQASVQSCNEPEVETDCEKEEDEETPRM ALKFL AIQKRVNGPKGTSEKGLMFVDATINCN AKST+VDSGATHNFISEQEARRLKLTIEKDTGKMK
Subjt:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK

Query:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
         VN EALPIVGVS RVMLKLGTWT SVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A6J1DK29 uncharacterized protein LOC1110218292.0e-27989.78Show/hide
Query:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----
        MSATKQLSKSH+DRLVEIEEQLLYLR VPDSLRLLEARVDEFSEKFGEIDAVNARVD LPIQDIAMRVET ESKATRPGSFE GDSSTNPNTQIEV    
Subjt:  MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEV----

Query:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT
                            +TIDTLRAEMTEI+TRVNLTMRAVGNQAPNQ NMGFNKLKVPEPKPFNGNR  KDLENF FDVEQYFK TGT SE MKVT
Subjt:  --------------------LTIDTLRAEMTEINTRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVT

Query:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART
        LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFF DNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLK WART
Subjt:  LATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFPDNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWART

Query:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL
        KLYEQRVQDLATAMA+AERLLDY+SEPSHPKKNATNPTGGNKTFKPFTPK GGADKRP GPNPGPSRGPYPQSQNAQRP SCFLC+GPH+VAECPHRAAL
Subjt:  KLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGADKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAAL

Query:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK
        TALQASVQSCNEPEV TDCEKEEDEETPRMGALKFL AIQKRVNGPKGTSEKGLMFVDA INCNPAKS +VDSGATHNFISEQEA RLKLTIEKDTGKMK
Subjt:  TALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCNPAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMK

Query:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        AVNSEALPIVGVS RV LKLGTWT S DFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  AVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGACAAAACAACTAAGCAAGTCGCACATCGACCGACTGGTAGAGATAGAAGAACAACTTCTCTACCTAAGAGGAGTCCCAGATTCCCTCCGTCTGCTGGAGGC
GCGAGTTGATGAATTCTCCGAGAAGTTTGGAGAAATAGACGCAGTGAATGCCCGTGTAGACGAGTTGCCGATACAAGATATAGCCATGAGGGTTGAGACCCTAGAAAGCA
AAGCTACGCGTCCTGGTAGCTTCGAACTTGGAGATAGTTCCACGAACCCAAACACACAGATAGAAGTACTAACCATCGACACCCTCCGAGCTGAGATGACTGAAATAAAC
ACTAGAGTGAACCTAACCATGCGAGCCGTGGGAAATCAGGCTCCCAACCAAGCGAACATGGGGTTCAACAAGTTGAAGGTCCCAGAGCCCAAACCATTCAATGGCAATAG
AGACGCAAAAGATCTCGAGAACTTCCTGTTCGACGTAGAACAGTACTTCAAGGCTACGGGGACAACGTCAGAAGAGATGAAAGTGACTTTGGCCACCATGCATCTTACTG
ATGATGCAAAGCTGTGGTGGAGATCTAAAGTCAACGACATTCAGAATGGTCGATGCACGATCAATAGCTGGGATGACCTGAAGAAAGAATTGAGGGGTCAGTTCTTCCCC
GACAATGTCGAGTTCATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCCGGGACTACGTGAAACAATTCTCTGCCGTGATGCTGGATATTCGCGACAT
GTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGGGCCAGAACCAAGCTGTATGAACAAAGGGTACAAGACCTTGCCACCGCCATGGCCGCTGCCG
AAAGATTGCTAGACTATAACAGTGAACCATCCCACCCGAAAAAGAATGCTACAAACCCCACTGGGGGAAACAAGACGTTCAAACCCTTTACCCCAAAGAGTGGGGGAGCT
GACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAAAGTCAAAACGCTCAAAGGCCGATGTCATGCTTCTTATGCAAAGGTCCCCACCGGGT
AGCCGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTGAAGTCGAAACGGATTGTGAGAAAGAAGAAGACGAAGAAACAC
CTAGAATGGGGGCGTTAAAATTCCTATATGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCGAAAAGGGGCTTATGTTCGTAGATGCTACGATCAATTGTAAC
CCTGCAAAGAGCACCATAGTGGATTCGGGTGCAACCCACAACTTCATATCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGGGTAAGATGAAGGC
CGTCAACTCCGAAGCTCTACCCATTGTAGGAGTTTCTATAAGAGTGATGTTGAAATTGGGGACGTGGACAGACAGTGTCGATTTCGTAGTAGTTCGCATGGACGACTTCG
ACGTTGTACTGGGGATGGAGTTCCTCATCGAACATAAAGTCATACCGATGCCTCTGGCCAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCTTTATGGCCATTCC
GATGGTCGAACAGCCGGTGGAGACAAGAGATGTCCCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGACAAAACAACTAAGCAAGTCGCACATCGACCGACTGGTAGAGATAGAAGAACAACTTCTCTACCTAAGAGGAGTCCCAGATTCCCTCCGTCTGCTGGAGGC
GCGAGTTGATGAATTCTCCGAGAAGTTTGGAGAAATAGACGCAGTGAATGCCCGTGTAGACGAGTTGCCGATACAAGATATAGCCATGAGGGTTGAGACCCTAGAAAGCA
AAGCTACGCGTCCTGGTAGCTTCGAACTTGGAGATAGTTCCACGAACCCAAACACACAGATAGAAGTACTAACCATCGACACCCTCCGAGCTGAGATGACTGAAATAAAC
ACTAGAGTGAACCTAACCATGCGAGCCGTGGGAAATCAGGCTCCCAACCAAGCGAACATGGGGTTCAACAAGTTGAAGGTCCCAGAGCCCAAACCATTCAATGGCAATAG
AGACGCAAAAGATCTCGAGAACTTCCTGTTCGACGTAGAACAGTACTTCAAGGCTACGGGGACAACGTCAGAAGAGATGAAAGTGACTTTGGCCACCATGCATCTTACTG
ATGATGCAAAGCTGTGGTGGAGATCTAAAGTCAACGACATTCAGAATGGTCGATGCACGATCAATAGCTGGGATGACCTGAAGAAAGAATTGAGGGGTCAGTTCTTCCCC
GACAATGTCGAGTTCATGGCTAGAAGGAAGCTACGTGAACTCCGACACACTGGAACAATCCGGGACTACGTGAAACAATTCTCTGCCGTGATGCTGGATATTCGCGACAT
GTCAGAGAAAGACAAGGTGTTCGTCTTTATCGAAGGATTGAAACCGTGGGCCAGAACCAAGCTGTATGAACAAAGGGTACAAGACCTTGCCACCGCCATGGCCGCTGCCG
AAAGATTGCTAGACTATAACAGTGAACCATCCCACCCGAAAAAGAATGCTACAAACCCCACTGGGGGAAACAAGACGTTCAAACCCTTTACCCCAAAGAGTGGGGGAGCT
GACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAAAGTCAAAACGCTCAAAGGCCGATGTCATGCTTCTTATGCAAAGGTCCCCACCGGGT
AGCCGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTGAAGTCGAAACGGATTGTGAGAAAGAAGAAGACGAAGAAACAC
CTAGAATGGGGGCGTTAAAATTCCTATATGCCATTCAAAAGAGGGTCAATGGACCCAAAGGAACGTCCGAAAAGGGGCTTATGTTCGTAGATGCTACGATCAATTGTAAC
CCTGCAAAGAGCACCATAGTGGATTCGGGTGCAACCCACAACTTCATATCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGGGTAAGATGAAGGC
CGTCAACTCCGAAGCTCTACCCATTGTAGGAGTTTCTATAAGAGTGATGTTGAAATTGGGGACGTGGACAGACAGTGTCGATTTCGTAGTAGTTCGCATGGACGACTTCG
ACGTTGTACTGGGGATGGAGTTCCTCATCGAACATAAAGTCATACCGATGCCTCTGGCCAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCTTTATGGCCATTCC
GATGGTCGAACAGCCGGTGGAGACAAGAGATGTCCCACCTGA
Protein sequenceShow/hide protein sequence
MSATKQLSKSHIDRLVEIEEQLLYLRGVPDSLRLLEARVDEFSEKFGEIDAVNARVDELPIQDIAMRVETLESKATRPGSFELGDSSTNPNTQIEVLTIDTLRAEMTEIN
TRVNLTMRAVGNQAPNQANMGFNKLKVPEPKPFNGNRDAKDLENFLFDVEQYFKATGTTSEEMKVTLATMHLTDDAKLWWRSKVNDIQNGRCTINSWDDLKKELRGQFFP
DNVEFMARRKLRELRHTGTIRDYVKQFSAVMLDIRDMSEKDKVFVFIEGLKPWARTKLYEQRVQDLATAMAAAERLLDYNSEPSHPKKNATNPTGGNKTFKPFTPKSGGA
DKRPQGPNPGPSRGPYPQSQNAQRPMSCFLCKGPHRVAECPHRAALTALQASVQSCNEPEVETDCEKEEDEETPRMGALKFLYAIQKRVNGPKGTSEKGLMFVDATINCN
PAKSTIVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSIRVMLKLGTWTDSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAKFEERPQPGGTYLYGHS
DGRTAGGDKRCPT