CuGenDBv2

Gene ID	Moc05g02640
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase
Genome location	chr5:1796085..1801219
RNA-Seq Expression	Moc05g02640
Synteny	Moc05g02640
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006412 - translation (biological process) GO:0015074 - DNA integration (biological process) GO:0003723 - RNA binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004518 - nuclease activity (molecular function)
InterPro domains	IPR000953 - Chromo/chromo shadow domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR023780 - Chromo domain IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]

1.1e-257

69.73

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER RK  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

KAA0036830.1 reverse transcriptase [Cucumis melo var. makuwa]

1.4e-257

69.73

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GSIRD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

1.8e-257

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]

1.8e-257

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]

1.8e-257

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUK4 Reverse transcriptase

5.2e-258

69.73

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER RK  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

A0A5A7T0E2 Reverse transcriptase

6.8e-258

69.73

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GSIRD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

A0A5A7UXR6 Reverse transcriptase

8.8e-258

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

A0A5D3BYE6 Reverse transcriptase

8.8e-258

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

A0A5D3C4R1 Reverse transcriptase

8.8e-258

69.58

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ
        +M+GP+LG+ADVTKPFEVETDASDYALGGV LQNGHPIAYESRKLN AERRYTVSEKEMLAVVHCLR+WRQYLLGS FVVKTDNSA CHFF QPKLTSKQ
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGV-LQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQ

Query:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT
        ARWQE LAEFDF+FE+K G SNQAADALSRK EHAA+C+LAH+  S++ GS+RD +RE+LQ+D +A+ V+ LAK GKTRQFWVE DLL T+GNRLYVPR 
Subjt:  ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRT

Query:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------
        G LRKKLL ECHDTLWAGHPGWQRTY                                                                          
Subjt:  GDLRKKLLLECHDTLWAGHPGWQRTYT-------------------------------------------------------------------------

Query:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV
                       CS E TAQLFFKH+VKLWGVPTSIVSDRDGRF G+FWTELFS LG+SLNISSSYHP TDG+TERFNSMLEEYLRHF++ARQKNWV
Subjt:  ---------------CSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWV

Query:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ
        QLLDVAQFCFN QTSSSTG+SPFEIV GRQP +PH++DHP+AGK+PQA NFTKEW+QT +IARAYLEKASK MKKWAD+KRRPLEFR GD+VLIKLRPEQ
Subjt:  QLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQ

Query:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF
        +RFRGRKDQRLVRKYEGPVEV+KKVG+ SY+V LP WMKI+PVIHVSNLKPYH D ED +RN V RP ID  +KEDK+ EEILAER R+  RP R++ E+
Subjt:  IRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREF

Query:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV
        LVKWK+LP  ETSWER EDLEAWK KIEDFKL+QLTGTST+
Subjt:  LVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTSTV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

6.5e-40

25.13

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN
        ++  PVL   D +K   +ETDASD A+G VL   H      P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    N
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN

Query:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR
        + +  +K+ ARWQ  L +F+F+  Y+ G +N  ADALSR V+         I     D SI  + +  +  D   + V E     K              
Subjt:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR

Query:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------
           ++  LL    +++ +P    L + ++ + H+     HPG             W           Q  +TC +                         
Subjt:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------

Query:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER
                                               E TA++F + ++  +G P  I++D D  FT   W +        +  S  Y P TDG+TER
Subjt:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER

Query:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR
         N  +E+ LR         WV  + + Q  +N    S+T  +PFEIV    P++  +    ++ K+ +    ++E  Q  +  + +L   +  MKK+ D 
Subjt:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR

Query:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE
        K + + EF+ GD V++K           K  +L   + GP  V++K G  +Y++ LP  +K       HVS+L+ Y  + E
Subjt:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE

P0CT35 Transposon Tf2-2 polyprotein

6.5e-40

25.13

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN
        ++  PVL   D +K   +ETDASD A+G VL   H      P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    N
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN

Query:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR
        + +  +K+ ARWQ  L +F+F+  Y+ G +N  ADALSR V+         I     D SI  + +  +  D   + V E     K              
Subjt:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR

Query:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------
           ++  LL    +++ +P    L + ++ + H+     HPG             W           Q  +TC +                         
Subjt:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------

Query:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER
                                               E TA++F + ++  +G P  I++D D  FT   W +        +  S  Y P TDG+TER
Subjt:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER

Query:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR
         N  +E+ LR         WV  + + Q  +N    S+T  +PFEIV    P++  +    ++ K+ +    ++E  Q  +  + +L   +  MKK+ D 
Subjt:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR

Query:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE
        K + + EF+ GD V++K           K  +L   + GP  V++K G  +Y++ LP  +K       HVS+L+ Y  + E
Subjt:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE

P0CT36 Transposon Tf2-3 polyprotein

6.5e-40

25.13

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN
        ++  PVL   D +K   +ETDASD A+G VL   H      P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    N
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN

Query:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR
        + +  +K+ ARWQ  L +F+F+  Y+ G +N  ADALSR V+         I     D SI  + +  +  D   + V E     K              
Subjt:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR

Query:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------
           ++  LL    +++ +P    L + ++ + H+     HPG             W           Q  +TC +                         
Subjt:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------

Query:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER
                                               E TA++F + ++  +G P  I++D D  FT   W +        +  S  Y P TDG+TER
Subjt:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER

Query:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR
         N  +E+ LR         WV  + + Q  +N    S+T  +PFEIV    P++  +    ++ K+ +    ++E  Q  +  + +L   +  MKK+ D 
Subjt:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR

Query:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE
        K + + EF+ GD V++K           K  +L   + GP  V++K G  +Y++ LP  +K       HVS+L+ Y  + E
Subjt:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE

P0CT41 Transposon Tf2-12 polyprotein

6.5e-40

25.13

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN
        ++  PVL   D +K   +ETDASD A+G VL   H      P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    N
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN

Query:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR
        + +  +K+ ARWQ  L +F+F+  Y+ G +N  ADALSR V+         I     D SI  + +  +  D   + V E     K              
Subjt:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR

Query:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------
           ++  LL    +++ +P    L + ++ + H+     HPG             W           Q  +TC +                         
Subjt:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------

Query:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER
                                               E TA++F + ++  +G P  I++D D  FT   W +        +  S  Y P TDG+TER
Subjt:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER

Query:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR
         N  +E+ LR         WV  + + Q  +N    S+T  +PFEIV    P++  +    ++ K+ +    ++E  Q  +  + +L   +  MKK+ D 
Subjt:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR

Query:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE
        K + + EF+ GD V++K           K  +L   + GP  V++K G  +Y++ LP  +K       HVS+L+ Y  + E
Subjt:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE

Q9UR07 Transposon Tf2-11 polyprotein

6.5e-40

25.13

Show/hide

Query:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN
        ++  PVL   D +K   +ETDASD A+G VL   H      P+ Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    N
Subjt:  MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGH------PIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSY--FVVKTDN-SAICHFFN

Query:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR
        + +  +K+ ARWQ  L +F+F+  Y+ G +N  ADALSR V+         I     D SI  + +  +  D   + V E     K              
Subjt:  QPKLTSKQ-ARWQELLAEFDFKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGK------------TR

Query:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------
           ++  LL    +++ +P    L + ++ + H+     HPG             W           Q  +TC +                         
Subjt:  QFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG-------------W-----------QRTYTCSV-------------------------

Query:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER
                                               E TA++F + ++  +G P  I++D D  FT   W +        +  S  Y P TDG+TER
Subjt:  ---------------------------------------ELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTER

Query:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR
         N  +E+ LR         WV  + + Q  +N    S+T  +PFEIV    P++  +    ++ K+ +    ++E  Q  +  + +L   +  MKK+ D 
Subjt:  FNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTGKSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADR

Query:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE
        K + + EF+ GD V++K           K  +L   + GP  V++K G  +Y++ LP  +K       HVS+L+ Y  + E
Subjt:  KRRPL-EFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVSYKVVLPAWMK--IHPVIHVSNLKPYHPDLE

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGAAAGGCCCAGTACTTGGGCTAGCCGACGTGACGAAGCCATTTGAAGTAGAAACGGATGCTTCAGACTACGCTTTAGGTGGTGTCCTCCAAAACGGTCACCCGAT
CGCTTACGAAAGTCGCAAGCTGAATAATGCGGAACGACGTTATACCGTATCAGAGAAAGAAATGCTAGCAGTCGTTCACTGCCTCAGGTCTTGGAGGCAGTACTTGTTGG
GCTCATATTTTGTGGTAAAGACGGACAACAGTGCAATTTGCCACTTCTTCAATCAGCCTAAGCTAACATCCAAACAGGCCAGATGGCAGGAATTGTTAGCCGAGTTTGAT
TTTAAGTTTGAATACAAGGCAGGAAAGTCCAACCAAGCTGCCGACGCTCTTAGCCGTAAAGTAGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACACCAGCAAAGT
GGACGGGTCGATCCGTGACCTCATTAGAGAATATCTTCAAAGAGACCCCTCCGCCCGAACTGTGGTCGAGCTGGCTAAGACCGGGAAGACCCGCCAGTTCTGGGTTGAAG
GGGACCTATTATTTACAAGAGGAAACAGACTGTACGTGCCAAGAACGGGAGACCTGAGAAAGAAGCTCCTACTTGAGTGTCACGATACTCTATGGGCTGGTCACCCGGGG
TGGCAACGGACTTACACGTGTTCCGTCGAGCTGACGGCGCAGTTGTTCTTTAAACATATAGTAAAGCTATGGGGAGTTCCGACGAGCATCGTTAGCGACAGGGATGGCCG
ATTTACAGGAACCTTCTGGACGGAACTTTTTTCTATTCTGGGTTCAAGCTTGAACATTTCCTCGAGTTATCACCCACCGACCGATGGTAAGACAGAGAGATTCAACAGCA
TGCTTGAGGAATACCTGCGTCACTTCATCGATGCCAGACAAAAGAACTGGGTCCAGCTGTTAGATGTGGCTCAATTCTGTTTTAACGGCCAGACAAGTTCTTCAACAGGA
AAGAGCCCCTTTGAGATTGTGTGCGGAAGACAGCCGTCTATGCCACATATTCTTGACCACCCGTATGCGGGGAAAAGTCCTCAAGCCCACAACTTCACAAAGGAATGGAA
GCAGACGACAGAAATTGCTCGAGCATATTTGGAGAAAGCTTCCAAGCATATGAAGAAATGGGCCGACCGCAAGAGACGCCCTCTCGAATTTCGAGTAGGCGACAAAGTTC
TTATCAAGCTGAGGCCAGAACAGATTCGTTTCCGAGGACGCAAAGACCAGAGACTCGTGAGAAAGTATGAGGGACCCGTGGAAGTCGTTAAGAAGGTGGGGAGTGTCTCG
TATAAGGTGGTGTTACCAGCTTGGATGAAGATCCACCCGGTAATCCATGTGAGCAATTTAAAACCTTACCACCCCGACCTTGAGGATGACGAACGCAATGCTGTTGTGCG
GCCCGACATCGACTTCAAACGGAAGGAAGACAAAGAAGCAGAAGAGATCCTAGCAGAGAGAACCAGAAAGGTGGGGAGACCCGTTCGAAAAGTTCGAGAATTCCTCGTCA
AATGGAAGGACCTACCTGATGCAGAGACCAGCTGGGAACGAGAAGAAGACCTTGAAGCCTGGAAGACGAAGATCGAGGACTTCAAGTTGCAGCAGTTGACAGGGACGTCA
ACCGTGGAATTTGGCCAAGCGGCTTTGGAACTAGGACTTTATTTATTGCGTTTACAGGGTAGGTCCTCTGAAGTTTGTATGCTACGAAAAGGGTTTGATTCACCTGGAAG
GAATGAACCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCACAACCAGAATCAGCTCTTTCTTCCAAGCGATCGTCTGGAAAGCTTAGTAGTGAGAACC
TCAATCTGGTAAACAACGGGGTAGGCCACAATCTGGTGGAAGGGAAAGAATCCGATGTAGAGAAATATAGATCTGAGCTGATCTCTATTTCCTTCCTTGAATCACCACCT
GACCTGAAATTGGAAGTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMKGPVLGLADVTKPFEVETDASDYALGGVLQNGHPIAYESRKLNNAERRYTVSEKEMLAVVHCLRSWRQYLLGSYFVVKTDNSAICHFFNQPKLTSKQARWQELLAEFD
FKFEYKAGKSNQAADALSRKVEHAALCMLAHIHTSKVDGSIRDLIREYLQRDPSARTVVELAKTGKTRQFWVEGDLLFTRGNRLYVPRTGDLRKKLLLECHDTLWAGHPG
WQRTYTCSVELTAQLFFKHIVKLWGVPTSIVSDRDGRFTGTFWTELFSILGSSLNISSSYHPPTDGKTERFNSMLEEYLRHFIDARQKNWVQLLDVAQFCFNGQTSSSTG
KSPFEIVCGRQPSMPHILDHPYAGKSPQAHNFTKEWKQTTEIARAYLEKASKHMKKWADRKRRPLEFRVGDKVLIKLRPEQIRFRGRKDQRLVRKYEGPVEVVKKVGSVS
YKVVLPAWMKIHPVIHVSNLKPYHPDLEDDERNAVVRPDIDFKRKEDKEAEEILAERTRKVGRPVRKVREFLVKWKDLPDAETSWEREEDLEAWKTKIEDFKLQQLTGTS
TVEFGQAALELGLYLLRLQGRSSEVCMLRKGFDSPGRNEPEEVTRESLIAISYSQPESALSSKRSSGKLSSENLNLVNNGVGHNLVEGKESDVEKYRSELISISFLESPP
DLKLEV

Moc05g02640 (gene) of Bitter gourd (OHB3-1) v2 genome