; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g03780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g03780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr5:2613113..2614193
RNA-Seq ExpressionMoc05g03780
SyntenyMoc05g03780
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597124.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-14485.67Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNY I  +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKITNLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWES  EV+HGGVIKMGFESEVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA  LFREMQYQGV PNHVSIVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEASIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

KAG7028589.1 Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-14485.67Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNY I  +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKITNLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWES  EV+HGGVIKMGFESEVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQF EA  LFREMQYQGV PNHVSIVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEASIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

XP_022147491.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia]1.9e-16796.46Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

Query:  KFSKCMLNLVI
           + +L L +
Subjt:  KFSKCMLNLVI

XP_022147493.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 [Momordica charantia]1.9e-16796.46Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

Query:  KFSKCMLNLVI
           + +L L +
Subjt:  KFSKCMLNLVI

XP_022974593.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima]1.7e-14787Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVK+PQRKNY I P+++ATS+ KKQAYYEDPVGF+AQ+EDVISWTSKITNLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWES  EV+HGGVIKMGFESEVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVKNGQFIEA  LFREMQYQGV PNHVSIVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEASIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

TrEMBL top hitse value%identityAlignment
A0A0A0L489 Uncharacterized protein3.7e-13277.49Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFV S +RK+Y I  MV+ATS+ KK+ Y+EDPV FYAQREDVISWTSKITNLVRTGQ E+AFGFFK MF+NGHRPN+VTMLSVIRAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SW+SM EV+HG VIKMGFESEVAVSTALLGFYS RDI TVWKLF QIP KD+VLWSA+IS CVKNGQ+ EA DL REMQ QGVQPN V+IVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        GV+SLGKE+H FSMRRDFYS+V++QNSLMDMYSKCR  EASIRVLK+MRKKD VSW+ +T+ACIQNNCPSK FKIFSRMRSFGFEL +TMML +I+A+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

Query:  KFSKCMLNLVI
           + +L L +
Subjt:  KFSKCMLNLVI

A0A6J1D1G5 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X29.4e-16896.46Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

Query:  KFSKCMLNLVI
           + +L L +
Subjt:  KFSKCMLNLVI

A0A6J1D2H4 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X19.4e-16896.46Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

Query:  KFSKCMLNLVI
           + +L L +
Subjt:  KFSKCMLNLVI

A0A6J1F1Z2 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like2.8e-14385Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVKSPQRKNY I  +++ TS+ KKQAYYEDPVGF+A++EDVISWTSKITNLVRTGQ ++AFGFFK MFANGHRPN+VTMLSV+RAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWES  EV+HGGVIKMGFESEVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVK+GQ  EA  LFREMQYQGV+PNHVSIVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEASIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

A0A6J1IGR3 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like8.3e-14887Show/hide
Query:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL
        MLCFSRCARNLFVK+PQRKNY I P+++ATS+ KKQAYYEDPVGF+AQ+EDVISWTSKITNLVRTGQ ++AFGFFK MFANGHRPNHVTMLSV+RAIDAL
Subjt:  MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDAL

Query:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
        SWES  EV+HGGVIKMGFESEVAVSTALLGFYS RDIG VWKLFYQIPYKD+VLWSA+ISACVKNGQFIEA  LFREMQYQGV PNHVSIVS+LPACAD 
Subjt:  SWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL
        G +SLGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEASIRVLK MRKKDMVSWRTVT+ACIQNNCPSKAFKIF+RMRSFGFELG+TMML  IAA+ L
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALEL

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336801.1e-3231.2Show/hide
Query:  ISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRD-IGTVWKLFYQIPYKD
        I+W++ +T   + G+S  A   F  MF+ G +P+  T++ V+ A   + +    + +H  ++K+GFE  +  +TAL+  Y+    +    K F  +  +D
Subjt:  ISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRD-IGTVWKLFYQIPYKD

Query:  IVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKK
        + LW+++IS  V+N    EAL L+R M+  G+ PN  ++ SVL AC+    + LGK++HG +++  F   V I ++L  MYSKC +LE    V +    K
Subjt:  IVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKK

Query:  DMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALELK
        D+VSW  + +    N    +A ++F  M + G E      + II+A   K
Subjt:  DMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALELK

Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic1.5e-3230.92Show/hide
Query:  DVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPY
        D++SW + +    + G +  A    K+M     +P+ +T++SV+ A+ AL   S+ + +HG  ++ GF+S V +STAL+  Y+    + T  +LF  +  
Subjt:  DVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPY

Query:  KDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMR
        +++V W++MI A V+N    EA+ +F++M  +GV+P  VS++  L ACAD G +  G+ IH  S+       V++ NSL+ MY KC+ ++ +  +   ++
Subjt:  KDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMR

Query:  KKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAL
         + +VSW  +     QN  P  A   FS+MRS   +      +++I A+
Subjt:  KKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAL

Q9C501 Pentatricopeptide repeat-containing protein At1g333503.2e-3233.6Show/hide
Query:  SEAAFGFFKTMFANG-HRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALL---------------------------------GFYS
        + +AF FF+ M      RPNH     V+++   LS      +VH  + K GF   V V TALL                                 G+  
Subjt:  SEAAFGFFKTMFANG-HRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALL---------------------------------GFYS

Query:  NRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREM-QYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMY
        + DI     LF  +P +D+  W+A+++AC +NG F+EA+ LFR M     ++PN V++V VL ACA +G + L K IH F+ RRD  S V + NSL+D+Y
Subjt:  NRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREM-QYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMY

Query:  SKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRM
         KC NLE +  V KM  KK + +W ++ N    +    +A  +F  M
Subjt:  SKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRM

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.2e-3430.2Show/hide
Query:  ARNLFVKSPQRKNYMIDPMVEATSS-----NKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW
        A  +F KSP R       +++  +S     N ++ + E PV      +DV+SW + I+    TG  + A   FK M     RP+  TM++V+ A      
Subjt:  ARNLFVKSPQRKNYMIDPMVEATSS-----NKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW

Query:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSG
          +   VH  +   GF S + +  AL+  YS   ++ T   LF ++PYKD++ W+ +I        + EAL LF+EM   G  PN V+++S+LPACA  G
Subjt:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSG

Query:  VISLGKEIHGFSMRR--DFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA
         I +G+ IH +  +R     +  +++ SL+DMY+KC ++EA+ +V   +  K + SW  +      +     +F +FSRMR  G +      + +++A
Subjt:  VISLGKEIHGFSMRR--DFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA

Q9MA50 Pentatricopeptide repeat-containing protein At1g05750, chloroplastic1.3e-3330.63Show/hide
Query:  EDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALS--WESMNEVVHGGVIKMGFE-SEVAVSTALLGFYSNR-----------
        E  +SWTS+I  L R G+   A   F  M   G  PNH+T ++++      +   E++ +++HG   K+G + + V V TA++G YS R           
Subjt:  EDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALS--WESMNEVVHGGVIKMGFE-SEVAVSTALLGFYSNR-----------

Query:  ---------------------DIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSM
                              +    K+F ++P +D++ W+AMI+  VK G   EAL  FREMQ  GV+P++V+I++ L AC + G +S G  +H + +
Subjt:  ---------------------DIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSM

Query:  RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFE
         +DF + V + NSL+D+Y +C  +E + +V   M K+ +VSW +V      N    ++   F +M+  GF+
Subjt:  RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFE

Arabidopsis top hitse value%identityAlignment
AT1G05750.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.3e-3530.63Show/hide
Query:  EDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALS--WESMNEVVHGGVIKMGFE-SEVAVSTALLGFYSNR-----------
        E  +SWTS+I  L R G+   A   F  M   G  PNH+T ++++      +   E++ +++HG   K+G + + V V TA++G YS R           
Subjt:  EDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALS--WESMNEVVHGGVIKMGFE-SEVAVSTALLGFYSNR-----------

Query:  ---------------------DIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSM
                              +    K+F ++P +D++ W+AMI+  VK G   EAL  FREMQ  GV+P++V+I++ L AC + G +S G  +H + +
Subjt:  ---------------------DIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSM

Query:  RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFE
         +DF + V + NSL+D+Y +C  +E + +V   M K+ +VSW +V      N    ++   F +M+  GF+
Subjt:  RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFE

AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-3630.2Show/hide
Query:  ARNLFVKSPQRKNYMIDPMVEATSS-----NKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW
        A  +F KSP R       +++  +S     N ++ + E PV      +DV+SW + I+    TG  + A   FK M     RP+  TM++V+ A      
Subjt:  ARNLFVKSPQRKNYMIDPMVEATSS-----NKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW

Query:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSG
          +   VH  +   GF S + +  AL+  YS   ++ T   LF ++PYKD++ W+ +I        + EAL LF+EM   G  PN V+++S+LPACA  G
Subjt:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSG

Query:  VISLGKEIHGFSMRR--DFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA
         I +G+ IH +  +R     +  +++ SL+DMY+KC ++EA+ +V   +  K + SW  +      +     +F +FSRMR  G +      + +++A
Subjt:  VISLGKEIHGFSMRR--DFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAA

AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-3330.92Show/hide
Query:  DVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPY
        D++SW + +    + G +  A    K+M     +P+ +T++SV+ A+ AL   S+ + +HG  ++ GF+S V +STAL+  Y+    + T  +LF  +  
Subjt:  DVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIPY

Query:  KDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMR
        +++V W++MI A V+N    EA+ +F++M  +GV+P  VS++  L ACAD G +  G+ IH  S+       V++ NSL+ MY KC+ ++ +  +   ++
Subjt:  KDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMR

Query:  KKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAL
         + +VSW  +     QN  P  A   FS+MRS   +      +++I A+
Subjt:  KKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAL

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.9e-3431.2Show/hide
Query:  ISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRD-IGTVWKLFYQIPYKD
        I+W++ +T   + G+S  A   F  MF+ G +P+  T++ V+ A   + +    + +H  ++K+GFE  +  +TAL+  Y+    +    K F  +  +D
Subjt:  ISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFESEVAVSTALLGFYSNRD-IGTVWKLFYQIPYKD

Query:  IVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKK
        + LW+++IS  V+N    EAL L+R M+  G+ PN  ++ SVL AC+    + LGK++HG +++  F   V I ++L  MYSKC +LE    V +    K
Subjt:  IVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKK

Query:  DMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALELK
        D+VSW  + +    N    +A ++F  M + G E      + II+A   K
Subjt:  DMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALELK

AT3G61170.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.5e-3530.11Show/hide
Query:  ARNLFVKSPQRKNYMIDPMVEATSSNKK-----QAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW
        AR +F K P+R  +  + M+ A S++++     + +  +PV      ++ ISW + I+   ++G    AF  F  M ++G +PN  T+ SV+R   +L  
Subjt:  ARNLFVKSPQRKNYMIDPMVEATSSNKK-----QAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSW

Query:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIP-YKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS
            E +HG  IK GF+ +V V   LL  Y+  + I     LF  +   K+ V W++M++   +NG   +A++ FR+++ +G Q N  +  SVL ACA  
Subjt:  ESMNEVVHGGVIKMGFESEVAVSTALLGFYSN-RDIGTVWKLFYQIP-YKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADS

Query:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRM
            +G ++H   ++  F + + +Q++L+DMY+KCR +E++  +L+ M   D+VSW ++   C++     +A  +F RM
Subjt:  GVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGCTTTTCGAGATGTGCACGCAACCTGTTTGTCAAAAGTCCTCAAAGAAAAAATTATATGATAGACCCTATGGTCGAGGCTACTTCAAGCAACAAAAAACAAGC
GTATTACGAAGACCCAGTTGGATTTTATGCTCAACGAGAAGACGTAATATCTTGGACATCTAAAATCACCAATTTGGTAAGAACGGGTCAGTCAGAAGCTGCTTTTGGCT
TCTTCAAGACGATGTTCGCAAATGGGCACAGGCCAAATCATGTGACAATGCTGAGCGTAATAAGAGCTATTGACGCATTAAGCTGGGAATCTATGAACGAGGTGGTTCAT
GGAGGAGTGATCAAAATGGGTTTTGAGTCAGAAGTGGCAGTTTCAACAGCTCTTCTTGGGTTTTATTCAAATCGTGATATTGGAACAGTCTGGAAGTTGTTCTATCAGAT
ACCTTATAAGGACATTGTTCTGTGGAGTGCCATGATCTCCGCATGCGTGAAGAATGGTCAGTTTATTGAAGCATTGGATCTTTTCAGAGAGATGCAATATCAGGGTGTTC
AACCAAACCATGTAAGTATTGTAAGCGTTCTACCAGCTTGTGCTGATTCTGGGGTTATATCTTTGGGTAAAGAGATTCATGGGTTTTCAATGAGAAGGGATTTTTATTCT
CTGGTTAACATTCAGAATTCACTCATGGATATGTATTCAAAATGTAGAAATCTTGAGGCATCAATTAGAGTTTTGAAGATGATGAGGAAAAAGGACATGGTATCCTGGAG
AACTGTGACTAATGCGTGTATCCAAAACAATTGTCCGAGTAAAGCGTTTAAAATTTTTTCAAGGATGCGATCTTTTGGATTCGAATTAGGCAAAACAATGATGCTGGCCA
TTATAGCTGCGTTGGAACTGAAATTCTCCAAATGTATGCTAAATTTGGTCATTTGGGGTTGGCGAAACTTATATTTGACGAGCTTGTTGACAAAGATATCATTGCCTGGA
GCGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGCTTTTCGAGATGTGCACGCAACCTGTTTGTCAAAAGTCCTCAAAGAAAAAATTATATGATAGACCCTATGGTCGAGGCTACTTCAAGCAACAAAAAACAAGC
GTATTACGAAGACCCAGTTGGATTTTATGCTCAACGAGAAGACGTAATATCTTGGACATCTAAAATCACCAATTTGGTAAGAACGGGTCAGTCAGAAGCTGCTTTTGGCT
TCTTCAAGACGATGTTCGCAAATGGGCACAGGCCAAATCATGTGACAATGCTGAGCGTAATAAGAGCTATTGACGCATTAAGCTGGGAATCTATGAACGAGGTGGTTCAT
GGAGGAGTGATCAAAATGGGTTTTGAGTCAGAAGTGGCAGTTTCAACAGCTCTTCTTGGGTTTTATTCAAATCGTGATATTGGAACAGTCTGGAAGTTGTTCTATCAGAT
ACCTTATAAGGACATTGTTCTGTGGAGTGCCATGATCTCCGCATGCGTGAAGAATGGTCAGTTTATTGAAGCATTGGATCTTTTCAGAGAGATGCAATATCAGGGTGTTC
AACCAAACCATGTAAGTATTGTAAGCGTTCTACCAGCTTGTGCTGATTCTGGGGTTATATCTTTGGGTAAAGAGATTCATGGGTTTTCAATGAGAAGGGATTTTTATTCT
CTGGTTAACATTCAGAATTCACTCATGGATATGTATTCAAAATGTAGAAATCTTGAGGCATCAATTAGAGTTTTGAAGATGATGAGGAAAAAGGACATGGTATCCTGGAG
AACTGTGACTAATGCGTGTATCCAAAACAATTGTCCGAGTAAAGCGTTTAAAATTTTTTCAAGGATGCGATCTTTTGGATTCGAATTAGGCAAAACAATGATGCTGGCCA
TTATAGCTGCGTTGGAACTGAAATTCTCCAAATGTATGCTAAATTTGGTCATTTGGGGTTGGCGAAACTTATATTTGACGAGCTTGTTGACAAAGATATCATTGCCTGGA
GCGCAATGA
Protein sequenceShow/hide protein sequence
MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKITNLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVH
GGVIKMGFESEVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQYQGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYS
LVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAALELKFSKCMLNLVIWGWRNLYLTSLLTKISLPG
AQ