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Moc05g09410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g09410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr5:7291004..7294068
RNA-Seq ExpressionMoc05g09410
SyntenyMoc05g09410
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4399153.1 hypothetical protein G4B88_023747 [Cannabis sativa]2.1e-0928.15Show/hide
Query:  GLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRIA
        G G++ R+WEG ++LAG         S++  EA A+L+ L+   +     I ++SD  ++V  ++  D  L+ +  ++++I+   DS    + V V R  
Subjt:  GLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRIA

Query:  NYCAHHLAHRASENRESEMWDFSILNWLEVVAIKD
        N CAH LA +    +E+ ++  S   WL +    D
Subjt:  NYCAHHLAHRASENRESEMWDFSILNWLEVVAIKD

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]7.8e-1240Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRI
        GG+GW+LR+ +G +I A  + +     +I  LE MA+ +GLRAI      PI +ESDS E + LL  +  D TEI W++ EI        +     + R 
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRI

Query:  ANYCAHHLAHRASEN
        AN  AH LA RA EN
Subjt:  ANYCAHHLAHRASEN

XP_022148737.1 uncharacterized protein LOC111017329 [Momordica charantia]2.8e-0931.54Show/hide
Query:  THIFWEFHQ-MGGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSG
        T   W  +Q +GGLGW++RN +  I  AG +++      I  LE MA+  G+ A+    +  + +ES+S E + L++G   ++TEI W+V +I+ + +  
Subjt:  THIFWEFHQ-MGGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSG

Query:  GVCDFVKVDRIANYCAHHLAHRASENRESE
         +  F  V R  N  A  +A+RA++    E
Subjt:  GVCDFVKVDRIANYCAHHLAHRASENRESE

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.3e-2448.51Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYL-VTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR
        GG+GW++R+W+G I+LAGN+ V+   +++K LEA A+L+GLR +  L V  P+ +E+DSAEV SLL  +  DLT+  WVV EI   +DS  +  F KV R
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYL-VTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR

Query:  IANYCAHHLAHRASENRESEMWDFSILNWLEVVA
          N CAH LA RAS  RES +W     NWL ++A
Subjt:  IANYCAHHLAHRASENRESEMWDFSILNWLEVVA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]7.3e-1037.4Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIR--------VESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVC
        GG+GW+LR+ +G +I A  + +     +I  LE MA+ +GLRAI      PI+        +ESDS E + LL  +  D TEI W++ EI    +   + 
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIR--------VESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVC

Query:  DFVKVDRIANYCAHHLAHRASEN
            + R AN  AH LA RA EN
Subjt:  DFVKVDRIANYCAHHLAHRASEN

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134123.8e-1240Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRI
        GG+GW+LR+ +G +I A  + +     +I  LE MA+ +GLRAI      PI +ESDS E + LL  +  D TEI W++ EI        +     + R 
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRI

Query:  ANYCAHHLAHRASEN
        AN  AH LA RA EN
Subjt:  ANYCAHHLAHRASEN

A0A6J1D5W1 uncharacterized protein LOC1110173291.3e-0931.54Show/hide
Query:  THIFWEFHQ-MGGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSG
        T   W  +Q +GGLGW++RN +  I  AG +++      I  LE MA+  G+ A+    +  + +ES+S E + L++G   ++TEI W+V +I+ + +  
Subjt:  THIFWEFHQ-MGGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSG

Query:  GVCDFVKVDRIANYCAHHLAHRASENRESE
         +  F  V R  N  A  +A+RA++    E
Subjt:  GVCDFVKVDRIANYCAHHLAHRASENRESE

A0A6J1DNV9 uncharacterized protein LOC1110224031.1e-2448.51Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYL-VTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR
        GG+GW++R+W+G I+LAGN+ V+   +++K LEA A+L+GLR +  L V  P+ +E+DSAEV SLL  +  DLT+  WVV EI   +DS  +  F KV R
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYL-VTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR

Query:  IANYCAHHLAHRASENRESEMWDFSILNWLEVVA
          N CAH LA RAS  RES +W     NWL ++A
Subjt:  IANYCAHHLAHRASENRESEMWDFSILNWLEVVA

A0A6J1DSV1 uncharacterized protein LOC1110236083.6e-1037.4Show/hide
Query:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIR--------VESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVC
        GG+GW+LR+ +G +I A  + +     +I  LE MA+ +GLRAI      PI+        +ESDS E + LL  +  D TEI W++ EI    +   + 
Subjt:  GGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIR--------VESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVC

Query:  DFVKVDRIANYCAHHLAHRASEN
            + R AN  AH LA RA EN
Subjt:  DFVKVDRIANYCAHHLAHRASEN

A0A7J6G6G7 RNase H domain-containing protein3.0e-0929.23Show/hide
Query:  GLGWVLRNWEGAIILAGNKSVDHGPS--SIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR
        G G++ R+WEG  +LAG   + + PS  S++  EA A+L+ L+   Y  T PI ++SD  ++V  ++ +D  L+ +  ++++I+    S    + V V R
Subjt:  GLGWVLRNWEGAIILAGNKSVDHGPS--SIKALEAMAVLKGLRAINYLVTFPIRVESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDR

Query:  IANYCAHHLAHRASENRESEMWDFSILNWL
          N CA+ L  +    + ++ +  S   WL
Subjt:  IANYCAHHLAHRASENRESEMWDFSILNWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCCAAGTATGAGGGCCGAGGTGAACCTGGCCAGGGTCCGCCCAAGTCTTCAGATCGGTCCGGGGGTCGAGTTCGAGCTGTAATCGGAAATACACTGTTG
GCCTATGGCGAATCAGTGACTCATATTTTCTGGGAGTTTCATCAGATGGGCGGTCTCGGCTGGGTACTTCGGAACTGGGAGGGCGCTATTATTCTTGCGGGGAAC
AAATCAGTGGATCACGGTCCTAGTAGCATCAAGGCATTGGAAGCTATGGCCGTTCTTAAAGGGCTTCGGGCGATTAACTATCTTGTGACTTTTCCAATCCGAGTG
GAATCTGATTCTGCGGAGGTAGTATCGCTCTTGAGAGGAGAAGATACCGATTTGACAGAAATTTTCTGGGTTGTTAATGAAATTCGTTATTGGCAAGATTCGGGT
GGGGTTTGTGATTTTGTAAAGGTTGATCGGATTGCGAATTACTGTGCCCATCACCTTGCGCATCGTGCTTCAGAGAATAGGGAGAGTGAAATGTGGGATTTTTCA
ATCCTTAATTGGCTGGAAGTTGTGGCCATTAAGGATTTTTCGGTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCCAAGTATGAGGGCCGAGGTGAACCTGGCCAGGGTCCGCCCAAGTCTTCAGATCGGTCCGGGGGTCGAGTTCGAGCTGTAATCGGAAATACACTGTTG
GCCTATGGCGAATCAGTGACTCATATTTTCTGGGAGTTTCATCAGATGGGCGGTCTCGGCTGGGTACTTCGGAACTGGGAGGGCGCTATTATTCTTGCGGGGAAC
AAATCAGTGGATCACGGTCCTAGTAGCATCAAGGCATTGGAAGCTATGGCCGTTCTTAAAGGGCTTCGGGCGATTAACTATCTTGTGACTTTTCCAATCCGAGTG
GAATCTGATTCTGCGGAGGTAGTATCGCTCTTGAGAGGAGAAGATACCGATTTGACAGAAATTTTCTGGGTTGTTAATGAAATTCGTTATTGGCAAGATTCGGGT
GGGGTTTGTGATTTTGTAAAGGTTGATCGGATTGCGAATTACTGTGCCCATCACCTTGCGCATCGTGCTTCAGAGAATAGGGAGAGTGAAATGTGGGATTTTTCA
ATCCTTAATTGGCTGGAAGTTGTGGCCATTAAGGATTTTTCGGTTGATTAA
Protein sequenceShow/hide protein sequence
MDAKYEGRGEPGQGPPKSSDRSGGRVRAVIGNTLLAYGESVTHIFWEFHQMGGLGWVLRNWEGAIILAGNKSVDHGPSSIKALEAMAVLKGLRAINYLVTFPIRV
ESDSAEVVSLLRGEDTDLTEIFWVVNEIRYWQDSGGVCDFVKVDRIANYCAHHLAHRASENRESEMWDFSILNWLEVVAIKDFSVD