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Moc05g09690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g09690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor SRM1-like
Genome locationchr5:7529725..7530324
RNA-Seq ExpressionMoc05g09690
SyntenyMoc05g09690
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KMS97920.1 hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]8.7e-1851.04Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH
        P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD +  ++ + G   + H
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH

XP_010695074.1 PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]8.7e-1851.04Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH
        P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD +  ++ + G   + H
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH

XP_021730551.1 transcription factor SRM1-like [Chenopodium quinoa]5.1e-1855.32Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV
        P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD ++     A RPAV
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV

XP_022145143.1 transcription factor SRM1-like [Momordica charantia]9.7e-94100Show/hide
Query:  MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG
        MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG
Subjt:  MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG

Query:  KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
        KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
Subjt:  KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI

XP_038690692.1 transcription factor DIVARICATA-like [Tripterygium wilfordii]8.7e-1860Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        P P   +++K T WT++EHKLFLIGL+ +GKG W+SI+  V VT+TA QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

TrEMBL top hitse value%identityAlignment
A0A6A2YSL0 Transcription factor DIVARICATA4.2e-1854.17Show/hide
Query:  DGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        D SSAL        +  +    +KRK T WT++EHKLFLIGLQ +GKG W+SI+  V +T+T  QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  DGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

A0A6J1CV56 transcription factor SRM1-like4.7e-94100Show/hide
Query:  MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG
        MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG
Subjt:  MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYG

Query:  KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
        KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
Subjt:  KGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI

A0A7C8ZAH3 Uncharacterized protein5.0e-1957.45Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV
        P  S  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD +T     A RPAV
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV

A0A7J7C5I7 Uncharacterized protein4.2e-1860Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        P P   +++K T WT++EHKLFLIGL+ +GKG W+SI+  V VT+TA QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

A0A803N8C1 Uncharacterized protein2.5e-1855.32Show/hide
Query:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV
        P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R+ S ++ RKRSSI+DITTVD ++     A RPAV
Subjt:  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS14.9e-1643.16Show/hide
Query:  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH
        S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R  S  + R+RSSI+DIT+V          G P   H
Subjt:  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH

Q2V9B0 Transcription factor MYB1R11.6e-1451.9Show/hide
Query:  EKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETM
        E+KR V  WT++EHKLFL+GLQ  GKG W+ I+     T+T  QVASHAQK++ R+ +  + R+RSS+ DITT  V  M
Subjt:  EKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETM

Q8LH59 Transcription factor MYBS14.9e-1643.16Show/hide
Query:  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH
        S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R  S  + R+RSSI+DIT+V          G P   H
Subjt:  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH

Q8S9H7 Transcription factor DIVARICATA1.2e-1750.63Show/hide
Query:  PSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV
        PS ++++K   WT++EHKLFL+GL+ YGKG W++I+    +T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV++
Subjt:  PSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV

Q9FNN6 Transcription factor SRM14.0e-1850.53Show/hide
Query:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV---DVETMSRFLAGR
        G S S +++RK   WT+DEH+LFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V   DV T    + G+
Subjt:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV---DVETMSRFLAGR

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein4.6e-1749.38Show/hide
Query:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        G S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R  S  + R+RSSI+DITTV+
Subjt:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

AT5G01200.1 Duplicated homeodomain-like superfamily protein2.2e-1945.22Show/hide
Query:  SDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKV-TCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQ
        SDY      SS  ++   G     P   ++D   SP PEK+RK    WT+DEH  FL+GL+ YGKG W++IA     T+T  QVASHAQK++ R+L+  +
Subjt:  SDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKV-TCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQ

Query:  SRKRSSINDITTVDV
         ++RSSI+DITTV++
Subjt:  SRKRSSINDITTVDV

AT5G04760.1 Duplicated homeodomain-like superfamily protein7.5e-2056.79Show/hide
Query:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD
        G      ++++ T WT++EHKLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Subjt:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD

AT5G08520.1 Duplicated homeodomain-like superfamily protein2.9e-1950.53Show/hide
Query:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV---DVETMSRFLAGR
        G S S +++RK   WT+DEH+LFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ R  S  + R+RSSI+DIT+V   DV T    + G+
Subjt:  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTV---DVETMSRFLAGR

AT5G58900.1 Homeodomain-like transcriptional regulator1.7e-1952.33Show/hide
Query:  SDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVE
        S  G SP  E+K+ V  WT++EHKLFL+GL+ YGKG W++I+    +T+T  QVASHAQK++ R+LS  + ++R+SI+DITTV++E
Subjt:  SDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATTCTGAGTTTTTTTATTCCGATTCCGATTTTTATTCTTCCGGCCATTTCCCCGCCGGCCGGACTCCGACTAATGAAAATCATTGTATTGGCAATGACATAAT
GTCGGATTACTTAACCTATTCTCCTCTTTCTTCGATTCAGTGGGAGCTGGAAGACGGCAGCTCAGCGCTGGACCCCACAACGCCAGTCTCGGATTTGGGTCCATCGCCGT
CGCCGGAAAAGAAGAGGAAAGTCACATGTTGGACGAAAGACGAACACAAGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAA
GTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAAGTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCAC
CACCGTAGATGTGGAGACAATGTCGCGGTTTCTCGCCGGCCGGCCGGCTGTCGCCCACTTCAACCCTCACTCCACTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATTCTGAGTTTTTTTATTCCGATTCCGATTTTTATTCTTCCGGCCATTTCCCCGCCGGCCGGACTCCGACTAATGAAAATCATTGTATTGGCAATGACATAAT
GTCGGATTACTTAACCTATTCTCCTCTTTCTTCGATTCAGTGGGAGCTGGAAGACGGCAGCTCAGCGCTGGACCCCACAACGCCAGTCTCGGATTTGGGTCCATCGCCGT
CGCCGGAAAAGAAGAGGAAAGTCACATGTTGGACGAAAGACGAACACAAGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAA
GTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAAGTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCAC
CACCGTAGATGTGGAGACAATGTCGCGGTTTCTCGCCGGCCGGCCGGCTGTCGCCCACTTCAACCCTCACTCCACTATTTAG
Protein sequenceShow/hide protein sequence
MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATE
VAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI