; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g09890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g09890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:7695839..7697257
RNA-Seq ExpressionMoc05g09890
SyntenyMoc05g09890
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.2e-6056.86Show/hide
Query:  QNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTL
        +++EPI+LDK KPADRPE  EK+ +QK+KGFDLEELLDQADSPF EEIM                             RE                    
Subjt:  QNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTL

Query:  SGSAKRATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSS
            KR TESLHDYV  FN+EKLQV+G TD VSLLAF+ G+RDEHLSFSFGK+T STFS+ALSRAQ+YMS  EFF+SK+E  GK +DQKRERSGDKPQ S
Subjt:  SGSAKRATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSS

Query:  RWEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR
        RWEKRDR+ QKDPP+KFEKYT TTVPLEQVLME K +      E  + S +K+ +
Subjt:  RWEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.6e-5252.12Show/hide
Query:  MGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------
        M +KVPPK KLP +K++DGS +P+DHL  Y EW DIYG+ EAI+ RVFS TL+GS +                                           
Subjt:  MGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------

Query:  RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSD--QKRERSGDKPQSSRWE
        +ATESL DYVA FN+EKLQV+G TD V LL F+SG++DE L FSFGK+TS TFS+A SRAQ YMSV E  HSK++P+GK++D   KR+R G+K    RWE
Subjt:  RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSD--QKRERSGDKPQSSRWE

Query:  KRD----RTSQKDPPRKFEKYTPTTVPLEQVLMESK
        + D    R  Q+DP RKFEKYTPTTVPLEQVLME K
Subjt:  KRD----RTSQKDPPRKFEKYTPTTVPLEQVLMESK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]5.6e-6158.06Show/hide
Query:  IEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK---------------------------------------
        +EEIM  KVPPK KLPTVKQFDG+ + VDHL AYREWMDIYGV EA+K RVFSTTLSGSA+                                       
Subjt:  IEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK---------------------------------------

Query:  ----RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSR
            RATESLHDYVA FNEEKLQV+G T+ VSL+AFMS IRDEHLSFSFGKKT STFS+ALSRAQKYMS  EFF SK+EPEGK SDQ RERSGDKPQ SR
Subjt:  ----RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSR

Query:  WEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTS
        WEKRDR+++K  P   +          +   + + K    AREDE TS
Subjt:  WEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.8e-10553.69Show/hide
Query:  MTSERSPRRSDDDWHARRKLNLDDPQVGGPEGDMSQQNPERPEGRPEVPTITAPEQLQNQFATLEEK---------------------------------
        MT ERSPRRSDDD  A+R+LNL DPQVGGPE   SQ N ER EG  E   +T PE  Q QFA LE+K                                 
Subjt:  MTSERSPRRSDDDWHARRKLNLDDPQVGGPEGDMSQQNPERPEGRPEVPTITAPEQLQNQFATLEEK---------------------------------

Query:  ----------------------------------NKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQ
                                          + +N+EPI+LDK KPADRPE  EK+ S KEKGFDLEELLDQADSPF EEIM +KVPPK KLPTVKQ
Subjt:  ----------------------------------NKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQ

Query:  FDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------RATESLHDYVAPFNEE
        FD + +PVDHL AYREWMDIYGV EA++ RVFSTTL+GSA+                                           R TESL DYVA FNEE
Subjt:  FDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------RATESLHDYVAPFNEE

Query:  KLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKFEKYT
        KLQV+G TD VSLLAFMSG+RDEHLSFSFGK+T +TFS+ALSRAQ+YMS  EFF+SK+EP+GK +D KRERSGDKPQ SRWEKRDR+SQKDPPRKFEKYT
Subjt:  KLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKFEKYT

Query:  PTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR
        PTTVP+EQVLME K +      E    S +K+ +
Subjt:  PTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.0e-7863.26Show/hide
Query:  EKNKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVF
        + + +N+EPI+L+K KP DRPE  EK+ +QKEKGFDLEELL QADSPF EEIM +KVPPK KLPTVK FDG   PVDHL AYREWMDIYGV +AI+ RVF
Subjt:  EKNKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVF

Query:  STTLSGSAK-------------------------------------------RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKK
        STTL+GSA+                                           R  ESLHDYVA FNEEKLQ++G TD VSLLAFMSG+RDEHLSFSF K+
Subjt:  STTLSGSAK-------------------------------------------RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKK

Query:  TSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKF
        T STFS+ALSRAQ+YMS  EF +SK+EP+GK +DQKRERSGDKPQ SRWEKRDR SQKDPPRKF
Subjt:  TSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKF

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128056.0e-6156.86Show/hide
Query:  QNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTL
        +++EPI+LDK KPADRPE  EK+ +QK+KGFDLEELLDQADSPF EEIM                             RE                    
Subjt:  QNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTL

Query:  SGSAKRATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSS
            KR TESLHDYV  FN+EKLQV+G TD VSLLAF+ G+RDEHLSFSFGK+T STFS+ALSRAQ+YMS  EFF+SK+E  GK +DQKRERSGDKPQ S
Subjt:  SGSAKRATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSS

Query:  RWEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR
        RWEKRDR+ QKDPP+KFEKYT TTVPLEQVLME K +      E  + S +K+ +
Subjt:  RWEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR

A0A6J1D3B7 uncharacterized protein LOC1110166191.8e-5252.12Show/hide
Query:  MGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------
        M +KVPPK KLP +K++DGS +P+DHL  Y EW DIYG+ EAI+ RVFS TL+GS +                                           
Subjt:  MGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------

Query:  RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSD--QKRERSGDKPQSSRWE
        +ATESL DYVA FN+EKLQV+G TD V LL F+SG++DE L FSFGK+TS TFS+A SRAQ YMSV E  HSK++P+GK++D   KR+R G+K    RWE
Subjt:  RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSD--QKRERSGDKPQSSRWE

Query:  KRD----RTSQKDPPRKFEKYTPTTVPLEQVLMESK
        + D    R  Q+DP RKFEKYTPTTVPLEQVLME K
Subjt:  KRD----RTSQKDPPRKFEKYTPTTVPLEQVLMESK

A0A6J1D7D2 uncharacterized protein LOC1110183072.7e-6158.06Show/hide
Query:  IEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK---------------------------------------
        +EEIM  KVPPK KLPTVKQFDG+ + VDHL AYREWMDIYGV EA+K RVFSTTLSGSA+                                       
Subjt:  IEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK---------------------------------------

Query:  ----RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSR
            RATESLHDYVA FNEEKLQV+G T+ VSL+AFMS IRDEHLSFSFGKKT STFS+ALSRAQKYMS  EFF SK+EPEGK SDQ RERSGDKPQ SR
Subjt:  ----RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSR

Query:  WEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTS
        WEKRDR+++K  P   +          +   + + K    AREDE TS
Subjt:  WEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTS

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-10553.69Show/hide
Query:  MTSERSPRRSDDDWHARRKLNLDDPQVGGPEGDMSQQNPERPEGRPEVPTITAPEQLQNQFATLEEK---------------------------------
        MT ERSPRRSDDD  A+R+LNL DPQVGGPE   SQ N ER EG  E   +T PE  Q QFA LE+K                                 
Subjt:  MTSERSPRRSDDDWHARRKLNLDDPQVGGPEGDMSQQNPERPEGRPEVPTITAPEQLQNQFATLEEK---------------------------------

Query:  ----------------------------------NKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQ
                                          + +N+EPI+LDK KPADRPE  EK+ S KEKGFDLEELLDQADSPF EEIM +KVPPK KLPTVKQ
Subjt:  ----------------------------------NKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQ

Query:  FDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------RATESLHDYVAPFNEE
        FD + +PVDHL AYREWMDIYGV EA++ RVFSTTL+GSA+                                           R TESL DYVA FNEE
Subjt:  FDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAK-------------------------------------------RATESLHDYVAPFNEE

Query:  KLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKFEKYT
        KLQV+G TD VSLLAFMSG+RDEHLSFSFGK+T +TFS+ALSRAQ+YMS  EFF+SK+EP+GK +D KRERSGDKPQ SRWEKRDR+SQKDPPRKFEKYT
Subjt:  KLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKFEKYT

Query:  PTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR
        PTTVP+EQVLME K +      E    S +K+ +
Subjt:  PTTVPLEQVLMESKTKGCSNAREDESTSKSKKQR

A0A6J1E1E7 uncharacterized protein LOC1110255484.9e-7963.26Show/hide
Query:  EKNKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVF
        + + +N+EPI+L+K KP DRPE  EK+ +QKEKGFDLEELL QADSPF EEIM +KVPPK KLPTVK FDG   PVDHL AYREWMDIYGV +AI+ RVF
Subjt:  EKNKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQADSPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVF

Query:  STTLSGSAK-------------------------------------------RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKK
        STTL+GSA+                                           R  ESLHDYVA FNEEKLQ++G TD VSLLAFMSG+RDEHLSFSF K+
Subjt:  STTLSGSAK-------------------------------------------RATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFGKK

Query:  TSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKF
        T STFS+ALSRAQ+YMS  EF +SK+EP+GK +DQKRERSGDKPQ SRWEKRDR SQKDPPRKF
Subjt:  TSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGGAAAGAAGTCCACGACGCTCTGACGATGATTGGCATGCAAGGAGGAAGTTAAACTTGGATGACCCCCAGGTAGGAGGACCCGAGGGCGACATGAGTCAACA
AAACCCGGAACGCCCAGAAGGGCGGCCTGAGGTGCCTACAATAACAGCCCCTGAACAACTCCAAAATCAGTTCGCAACCTTAGAAGAAAAGAATAAACAAAATGCTGAGC
CCATAAACCTCGACAAAGACAAACCGGCAGATCGACCTGAGTTGTTAGAAAAGCAACAAAGTCAAAAAGAGAAGGGGTTCGATCTCGAAGAGCTACTGGATCAAGCCGAC
TCGCCATTTATAGAAGAAATCATGGGGAAGAAGGTCCCTCCAAAATTGAAGCTACCAACGGTGAAACAATTCGACGGGTCGGCCAATCCGGTAGACCACCTCTACGCCTA
CCGAGAATGGATGGATATTTACGGGGTGTTAGAGGCGATCAAATTTCGGGTGTTCTCGACAACTTTGAGTGGGTCGGCCAAGAGAGCAACAGAGAGCCTTCACGACTATG
TGGCTCCGTTTAATGAGGAGAAATTGCAGGTTCAGGGTTTCACAGATGTGGTGTCTCTACTAGCTTTCATGTCCGGCATCAGGGATGAACACCTTTCATTCTCTTTTGGG
AAAAAGACGTCGAGCACCTTCTCGAAGGCGCTGAGCCGAGCTCAGAAATATATGAGCGTCAGAGAGTTCTTCCATTCAAAGAAAGAGCCAGAGGGAAAATGGTCCGACCA
GAAGAGAGAGAGGTCTGGGGATAAGCCACAGTCATCAAGATGGGAGAAAAGAGATCGAACTAGCCAGAAGGATCCACCCCGGAAGTTCGAGAAGTATACCCCAACTACAG
TCCCACTCGAACAAGTACTGATGGAATCAAAAACCAAAGGTTGCTCAAATGCCAGAGAGGATGAAAGCACCTCCAAGTCAAAGAAGCAAAGGGCGATATTGCCTTTTCCG
CCGAGACCACGGTCATGCTACTCAGAATTGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGGAAAGAAGTCCACGACGCTCTGACGATGATTGGCATGCAAGGAGGAAGTTAAACTTGGATGACCCCCAGGTAGGAGGACCCGAGGGCGACATGAGTCAACA
AAACCCGGAACGCCCAGAAGGGCGGCCTGAGGTGCCTACAATAACAGCCCCTGAACAACTCCAAAATCAGTTCGCAACCTTAGAAGAAAAGAATAAACAAAATGCTGAGC
CCATAAACCTCGACAAAGACAAACCGGCAGATCGACCTGAGTTGTTAGAAAAGCAACAAAGTCAAAAAGAGAAGGGGTTCGATCTCGAAGAGCTACTGGATCAAGCCGAC
TCGCCATTTATAGAAGAAATCATGGGGAAGAAGGTCCCTCCAAAATTGAAGCTACCAACGGTGAAACAATTCGACGGGTCGGCCAATCCGGTAGACCACCTCTACGCCTA
CCGAGAATGGATGGATATTTACGGGGTGTTAGAGGCGATCAAATTTCGGGTGTTCTCGACAACTTTGAGTGGGTCGGCCAAGAGAGCAACAGAGAGCCTTCACGACTATG
TGGCTCCGTTTAATGAGGAGAAATTGCAGGTTCAGGGTTTCACAGATGTGGTGTCTCTACTAGCTTTCATGTCCGGCATCAGGGATGAACACCTTTCATTCTCTTTTGGG
AAAAAGACGTCGAGCACCTTCTCGAAGGCGCTGAGCCGAGCTCAGAAATATATGAGCGTCAGAGAGTTCTTCCATTCAAAGAAAGAGCCAGAGGGAAAATGGTCCGACCA
GAAGAGAGAGAGGTCTGGGGATAAGCCACAGTCATCAAGATGGGAGAAAAGAGATCGAACTAGCCAGAAGGATCCACCCCGGAAGTTCGAGAAGTATACCCCAACTACAG
TCCCACTCGAACAAGTACTGATGGAATCAAAAACCAAAGGTTGCTCAAATGCCAGAGAGGATGAAAGCACCTCCAAGTCAAAGAAGCAAAGGGCGATATTGCCTTTTCCG
CCGAGACCACGGTCATGCTACTCAGAATTGCTTTGA
Protein sequenceShow/hide protein sequence
MTSERSPRRSDDDWHARRKLNLDDPQVGGPEGDMSQQNPERPEGRPEVPTITAPEQLQNQFATLEEKNKQNAEPINLDKDKPADRPELLEKQQSQKEKGFDLEELLDQAD
SPFIEEIMGKKVPPKLKLPTVKQFDGSANPVDHLYAYREWMDIYGVLEAIKFRVFSTTLSGSAKRATESLHDYVAPFNEEKLQVQGFTDVVSLLAFMSGIRDEHLSFSFG
KKTSSTFSKALSRAQKYMSVREFFHSKKEPEGKWSDQKRERSGDKPQSSRWEKRDRTSQKDPPRKFEKYTPTTVPLEQVLMESKTKGCSNAREDESTSKSKKQRAILPFP
PRPRSCYSELL