; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g10040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g10040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP-dependent DNA helicase
Genome locationchr5:7844664..7855649
RNA-Seq ExpressionMoc05g10040
SyntenyMoc05g10040
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5520322.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]6.3e-6265.06Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        ++ R AILDN WV PYNPYLL RYNCH+NVEICS +KAVKYLYKYIYKGHD+ AV I+ +  D  ++EIQ FQDARWVSA EA+WRIF+F +NEMYP+VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NLQLHLPN+Q VSYW NQ+L  +I  + AS+TMLT++F  C  D++ RK LY++FPEY+VW+++ K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

KAG5520322.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]1.1e-0557.14Show/hide
Query:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI
        +GN Y +  R L+ +   +   IHI S+ K+DQRVYNTPSADQVAAIWIEGN  N+
Subjt:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI

KAG5520322.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]6.3e-6265.06Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        ++ R AILDN WV PYNPYLL RYNCH+NVEICS +KAVKYLYKYIYKGHD+ AV I+ +  D  ++EIQ FQDARWVSA EA+WRIF+F +NEMYP+VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NLQLHLPN+Q VSYW NQ+L  +I  + AS+TMLT++F  C  D++ RK LY++FPEY+VW+++ K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

KAG5520323.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]1.1e-0557.14Show/hide
Query:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI
        +GN Y +  R L+ +   +   IHI S+ K+DQRVYNTPSADQVAAIWIEGN  N+
Subjt:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI

KAG5561033.1 hypothetical protein RHGRI_004151 [Rhododendron griersonianum]1.1e-0557.14Show/hide
Query:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI
        +GN Y +  R L+ +   +   IHI S+ K+DQRVYNTPSADQVAAIWIEGN  N+
Subjt:  TGNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNI

KAG5561033.1 hypothetical protein RHGRI_004151 [Rhododendron griersonianum]6.3e-6265.06Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        ++ R AILDN WV PYNPYLL RYNCH+NVEICS +KAVKYLYKYIYKGHD+ AV I+ +  D  ++EIQ FQDARWVSA EA+WRIF+F +NEMYP+VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NLQLHLPN+Q VSYW NQ+L  +I  + AS+TMLT++F  C  D++ RK LY++FPEY+VW+++ K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]2.6e-6364.67Show/hide
Query:  NINIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSV
        N+ +R A L+N WV PYNPYLL RYNCH+NVEICS + AVKYLYKYIYKGHDR A+ I+++ +++ ++EI+ FQDARW+SA EA+WRIF+F MNE+YP V
Subjt:  NINIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSV

Query:  INLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        I+L LHLPNQQ V+YW NQNL+ ++ +++ SKTMLT+YF MC   E ARKLLYK+FPE+YVWDK  K
Subjt:  INLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]1.4e-0864Show/hide
Query:  NFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGN
        N Y K  RSLKD  S +D+Q+HI+ +VK+DQRVYN+P+ADQVAA+W+EGN
Subjt:  NFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGN

XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]3.3e-6366.46Show/hide
Query:  IRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINL
        +R A LDN WV PYNPYLL RYNCH+NVEICS + AVKYLYKYIYKGHDR AV I+ +D++  ++EI+ FQDARWVSA EA+WRIF+F +NE+YP+VINL
Subjt:  IRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINL

Query:  QLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
         LHLPNQQ V+YW NQNL+ ++G++  SKTMLT+YF MC    DA+K LY++FPE+YVWDK  K
Subjt:  QLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

TrEMBL top hitse value%identityAlignment
A0A1S3XS57 ATP-dependent DNA helicase5.2e-5457.23Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        +N+R   ++N WV PYNPYLL R+NC++NVE+CS +K +KYLYKYIYKGHD  AV I  DD +K V+EI++FQDARWVS PEALWRI++F ++EM P VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
         LQLHLP  Q + YW+ QNL+ ++  +    TMLT+YF+MC  D+DAR  LY++F E+YVW+   K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

A0A1U7VMH0 ATP-dependent DNA helicase1.6e-5558.43Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        +N+R   ++N WV PYNPYLL R+NCH+NVE+CS +K +KYLYKYIYKGHD  AV I  DD +K V+EI++FQDARWVS PEALWRI++F ++EM P VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NLQLHLP  Q + YW+ QNL+ ++  +    TMLT+YF+MC  D+DAR  LY++F E+YVW+   K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

A0A2I0XEU5 ATP-dependent DNA helicase1.8e-5460.24Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        + +RN  LDN WV PYNPYLL RYNCH+NVEICS IKAVKY+YKYIYKGHD+ +V+I++ + ++  +EIQ +QD RWVSAPEALWRIF+F +NEMYPSV 
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NLQLHL +QQ V Y  NQNL  ++      K+MLT++F +  +D +A+K LY++ PE YVWDK+ K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

A0A5B7A9C3 ATP-dependent DNA helicase3.6e-6365.27Show/hide
Query:  NIDNINIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY
        N + + +RNA LDN WV PYNPYLL RYNCH+NVEICS +KAVKYLYKYIYKGHDR AV I  +D++  V+EIQ FQDARWVSA EA+WRI++F +NE+Y
Subjt:  NIDNINIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMY

Query:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDK
        P+VINLQLHLPN+Q V+YWENQNL+ +I +++ SKTMLT++F  C   E+AR+ LY++FPE+YVW +
Subjt:  PSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDK

A0A5B7A9C3 ATP-dependent DNA helicase3.5e-1058.46Show/hide
Query:  GNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNINIRNAILDNA
        GN Y +  R LKD  SF+D QIHI  NV++DQRVYN+P+ADQVAAIWIEGN  +I +   I+ +A
Subjt:  GNFYGK--RSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNINIRNAILDNA

A0A5B7A9C3 ATP-dependent DNA helicase6.8e-6264.46Show/hide
Query:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI
        + +RNA LDN WV PY+PYLL RYNCH+NVEICS I  VKYLYKYIYKGHDR AV I+ D++DK V+EI+ FQDARWVSA EA WRIF+F +NE+ P+VI
Subjt:  INIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDDKFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVI

Query:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK
        NL LHLPNQ  +SYW+ QNL++++ F+ +SKTMLT++F  C  +E+AR+ LY+DFP++YVWDK  K
Subjt:  NLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAK

SwissProt top hitse value%identityAlignment
Q9FME0 Replication protein A 70 kDa DNA-binding subunit D6.2e-0429.52Show/hide
Query:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH
        ++LW DL    G E+ +    +P I   ++K+  ++G VSLST   S ++I+P   +AK L +  D   K +++  I  G +  + +G+  + T R    
Subjt:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH

Query:  HATGN
        H T N
Subjt:  HATGN

Q9SD82 Replication protein A 70 kDa DNA-binding subunit B4.3e-0531.43Show/hide
Query:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH
        ++LW DL    G E+ +   N+P I   ++K+  ++G VSLST   S ++I+PN  +A  L +  D   K  ++  I  G +  +N+G+  M + R    
Subjt:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH

Query:  HATGN
        H T N
Subjt:  HATGN

Arabidopsis top hitse value%identityAlignment
AT5G08020.1 RPA70-kDa subunit B3.1e-0631.43Show/hide
Query:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH
        ++LW DL    G E+ +   N+P I   ++K+  ++G VSLST   S ++I+PN  +A  L +  D   K  ++  I  G +  +N+G+  M + R    
Subjt:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH

Query:  HATGN
        H T N
Subjt:  HATGN

AT5G61000.1 Replication factor-A protein 1-related4.4e-0529.52Show/hide
Query:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH
        ++LW DL    G E+ +    +P I   ++K+  ++G VSLST   S ++I+P   +AK L +  D   K +++  I  G +  + +G+  + T R    
Subjt:  LTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEH

Query:  HATGN
        H T N
Subjt:  HATGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGACATTATGGGGTGATTTAACAGAAAATGAAGGTCTAGAAGTGGAAGAAAATGTTAAAAATAATCCTACCATCATTGCAATCAATGTTAAAATTGAGATTTA
CGAAGGAGAAGTTAGTTTGTCAACAACTTTGACCAGTATTATTCTCATTGATCCAAACCTTTCGGATGCAAAGGACCTAGATGCTAGGATTGATATTCTACAAAAAAATG
TGGCGGTTCTGGATATTCCAGACGGCGGGACATTGTGTTCTAACTCAGGTACAACTTTGATGCCAACTAAAAGGTTTGATGAACACCATGCAACGGGAAACTTCTACGGC
AAAAGATCCTTGAAGGATATTGGGTCATTCGAAGACATCCAAATACATATTGCAAGTAATGTGAAGATTGATCAACGAGTCTATAACACACCCTCAGCAGATCAAGTTGC
TGCAATATGGATTGAAGGAAACATAGACAATATAAATATTAGAAATGCAATCTTAGATAATGCTTGGGTTGCTCCTTATAATCCGTATCTTCTTGGAAGATATAATTGTC
ATCTTAACGTTGAAATTTGTTCAGCAATTAAGGCGGTCAAATATCTCTACAAATATATATATAAAGGCCATGACAGAGCAGCAGTTGCAATAACAAAGGATGATGATGAC
AAATTTGTCAATGAGATACAAGACTTCCAAGATGCAAGATGGGTTTCAGCACCAGAAGCGTTGTGGAGAATTTTTGACTTTAGGATGAATGAAATGTATCCTTCAGTTAT
AAATCTACAACTGCATCTTCCAAATCAACAATTGGTTTCATATTGGGAGAACCAGAATTTACAACGGCTCATTGGATTTGAATATGCTTCAAAAACAATGTTGACACAAT
ATTTTCAAATGTGTGGAACAGATGAAGATGCTAGAAAATTGCTTTACAAAGATTTTCCAGAGTACTATGTATGGGATAAAAGTGCAAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGACATTATGGGGTGATTTAACAGAAAATGAAGGTCTAGAAGTGGAAGAAAATGTTAAAAATAATCCTACCATCATTGCAATCAATGTTAAAATTGAGATTTA
CGAAGGAGAAGTTAGTTTGTCAACAACTTTGACCAGTATTATTCTCATTGATCCAAACCTTTCGGATGCAAAGGACCTAGATGCTAGGATTGATATTCTACAAAAAAATG
TGGCGGTTCTGGATATTCCAGACGGCGGGACATTGTGTTCTAACTCAGGTACAACTTTGATGCCAACTAAAAGGTTTGATGAACACCATGCAACGGGAAACTTCTACGGC
AAAAGATCCTTGAAGGATATTGGGTCATTCGAAGACATCCAAATACATATTGCAAGTAATGTGAAGATTGATCAACGAGTCTATAACACACCCTCAGCAGATCAAGTTGC
TGCAATATGGATTGAAGGAAACATAGACAATATAAATATTAGAAATGCAATCTTAGATAATGCTTGGGTTGCTCCTTATAATCCGTATCTTCTTGGAAGATATAATTGTC
ATCTTAACGTTGAAATTTGTTCAGCAATTAAGGCGGTCAAATATCTCTACAAATATATATATAAAGGCCATGACAGAGCAGCAGTTGCAATAACAAAGGATGATGATGAC
AAATTTGTCAATGAGATACAAGACTTCCAAGATGCAAGATGGGTTTCAGCACCAGAAGCGTTGTGGAGAATTTTTGACTTTAGGATGAATGAAATGTATCCTTCAGTTAT
AAATCTACAACTGCATCTTCCAAATCAACAATTGGTTTCATATTGGGAGAACCAGAATTTACAACGGCTCATTGGATTTGAATATGCTTCAAAAACAATGTTGACACAAT
ATTTTCAAATGTGTGGAACAGATGAAGATGCTAGAAAATTGCTTTACAAAGATTTTCCAGAGTACTATGTATGGGATAAAAGTGCAAAAGAATGA
Protein sequenceShow/hide protein sequence
MKLTLWGDLTENEGLEVEENVKNNPTIIAINVKIEIYEGEVSLSTTLTSIILIDPNLSDAKDLDARIDILQKNVAVLDIPDGGTLCSNSGTTLMPTKRFDEHHATGNFYG
KRSLKDIGSFEDIQIHIASNVKIDQRVYNTPSADQVAAIWIEGNIDNINIRNAILDNAWVAPYNPYLLGRYNCHLNVEICSAIKAVKYLYKYIYKGHDRAAVAITKDDDD
KFVNEIQDFQDARWVSAPEALWRIFDFRMNEMYPSVINLQLHLPNQQLVSYWENQNLQRLIGFEYASKTMLTQYFQMCGTDEDARKLLYKDFPEYYVWDKSAKE