; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g10100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g10100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:7886342..7887115
RNA-Seq ExpressionMoc05g10100
SyntenyMoc05g10100
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.1e-6066.29Show/hide
Query:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ
        M+ K+PPKF+LPAIK+YD STDP+DHL  Y EW D+YGITEAIRC+VFSFTLTG+TRIWF+QL+RKSI SFK+L RAF+TQF GG +RSRPV YL TIKQ
Subjt:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ

Query:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD
        ++TESL +YV+RFN+E+L V  LT+ + LL FIS V++++L+FS  KR   TFSEA +R Q YM V EL+HSK D
Subjt:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.1e-5862.5Show/hide
Query:  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFT
        EEIM+ K+PPKF+LP +KQ+D + D VDHL  YREWMD+YG++EA++C+VFS TL+G+ R+WFRQL+R SI SFK L +AF+TQFIGG+ RSRPV YL T
Subjt:  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFT

Query:  IKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK
        IKQR+TESL +YV+RFNEE+L V  LTN +SL+AF+S +R++ L FS  K+ P+TFSEAL+R QKYM   E   SK
Subjt:  IKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.4e-5661.24Show/hide
Query:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ
        M+ K  PKF+LPAI +YD S DP+DHL  YREW D+Y I EAIRC+VFSFTLTG+ R WFRQL+R SI SFK+L  AF+TQF+GG+ +S+PVTYL TIKQ
Subjt:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ

Query:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK
        ++TESL EYV+RFNEE+L V  LT+ ++L+AF+S V+++ L+FS  KR P TF EAL+R QKYM   EL+H   DL +
Subjt:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.7e-6859.55Show/hide
Query:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT
        E   +DK +P ++     ++H+   K +   LEE++DQ DSPF EEIMR K+PPKF+LP +KQ+D +TDPVDHL  YREWMD+YG++EA+RC+VFS TL 
Subjt:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT

Query:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF
        G+ RIWFRQL+R SI SFK L RAF+TQF+GG+ RSRPV YL TIKQR+TESL +YV+RFNEE+L V  LT+ +SLLAF+S VR++ L FS  KR P TF
Subjt:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF

Query:  SEALTRIQKYMDVKELLHSK
        SEAL+R Q+YM   E  +SK
Subjt:  SEALTRIQKYMDVKELLHSK

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]2.2e-6557.27Show/hide
Query:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT
        E   ++K +P+++     ++HN   K +   LEE++ Q DSPF EEIMR K+PPKF+LP +K +D  T+PVDHL  YREWMD+YG+++AIRC+VFS TL 
Subjt:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT

Query:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF
        G+ RIWFRQL+R SI SFK L RAF+TQF+GG+ RSRPV YL TIKQR+ ESL +YV+RFNEE+L +  LT+ +SLLAF+S VR++ L FS  KR P+TF
Subjt:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF

Query:  SEALTRIQKYMDVKELLHSK
        SEAL+R Q+YM   E  +SK
Subjt:  SEALTRIQKYMDVKELLHSK

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.0e-6066.29Show/hide
Query:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ
        M+ K+PPKF+LPAIK+YD STDP+DHL  Y EW D+YGITEAIRC+VFSFTLTG+TRIWF+QL+RKSI SFK+L RAF+TQF GG +RSRPV YL TIKQ
Subjt:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ

Query:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD
        ++TESL +YV+RFN+E+L V  LT+ + LL FIS V++++L+FS  KR   TFSEA +R Q YM V EL+HSK D
Subjt:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD

A0A6J1D7D2 uncharacterized protein LOC1110183075.6e-5962.5Show/hide
Query:  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFT
        EEIM+ K+PPKF+LP +KQ+D + D VDHL  YREWMD+YG++EA++C+VFS TL+G+ R+WFRQL+R SI SFK L +AF+TQFIGG+ RSRPV YL T
Subjt:  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFT

Query:  IKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK
        IKQR+TESL +YV+RFNEE+L V  LTN +SL+AF+S +R++ L FS  K+ P+TFSEAL+R QKYM   E   SK
Subjt:  IKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-6859.55Show/hide
Query:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT
        E   +DK +P ++     ++H+   K +   LEE++DQ DSPF EEIMR K+PPKF+LP +KQ+D +TDPVDHL  YREWMD+YG++EA+RC+VFS TL 
Subjt:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT

Query:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF
        G+ RIWFRQL+R SI SFK L RAF+TQF+GG+ RSRPV YL TIKQR+TESL +YV+RFNEE+L V  LT+ +SLLAF+S VR++ L FS  KR P TF
Subjt:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF

Query:  SEALTRIQKYMDVKELLHSK
        SEAL+R Q+YM   E  +SK
Subjt:  SEALTRIQKYMDVKELLHSK

A0A6J1DZ49 uncharacterized protein LOC1110248516.8e-5761.24Show/hide
Query:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ
        M+ K  PKF+LPAI +YD S DP+DHL  YREW D+Y I EAIRC+VFSFTLTG+ R WFRQL+R SI SFK+L  AF+TQF+GG+ +S+PVTYL TIKQ
Subjt:  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQ

Query:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK
        ++TESL EYV+RFNEE+L V  LT+ ++L+AF+S V+++ L+FS  KR P TF EAL+R QKYM   EL+H   DL +
Subjt:  RSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK

A0A6J1E1E7 uncharacterized protein LOC1110255481.0e-6557.27Show/hide
Query:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT
        E   ++K +P+++     ++HN   K +   LEE++ Q DSPF EEIMR K+PPKF+LP +K +D  T+PVDHL  YREWMD+YG+++AIRC+VFS TL 
Subjt:  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLT

Query:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF
        G+ RIWFRQL+R SI SFK L RAF+TQF+GG+ RSRPV YL TIKQR+ ESL +YV+RFNEE+L +  LT+ +SLLAF+S VR++ L FS  KR P+TF
Subjt:  GTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTF

Query:  SEALTRIQKYMDVKELLHSK
        SEAL+R Q+YM   E  +SK
Subjt:  SEALTRIQKYMDVKELLHSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGCAAAGCTTTTCACCCCAGGATCTGGAAACTACACGATCACAGAAGTTAACGACACAGAAAACCCGACCAAGCCTCGAGAACACCATGGTCGACAAAGAAGA
ACCACTTAACCAACATGCAGGAGAATCACAGAAGCATAATGGCGAACTGAAGAATAGAGAATGCGGTCTCGAAGAAATTATAGATCAGACAGATTCGCCATTCGGGGAGG
AGATAATGAGAGGAAAGATCCCTCCAAAATTCAGACTCCCTGCCATAAAGCAATACGACGACTCAACAGATCCTGTAGACCATCTATGCACATATAGGGAATGGATGGAC
CTCTACGGAATAACAGAGGCAATTAGGTGCAAAGTATTCTCTTTCACATTAACCGGCACAACTCGCATATGGTTTCGACAATTGAGAAGAAAATCAATCTTCTCCTTCAA
ACAGCTGGTCAGGGCATTTATCACGCAATTCATTGGAGGGCAGGATAGGAGTCGACCTGTGACCTACCTCTTTACCATAAAACAAAGATCGACAGAGAGCCTTGGAGAAT
ATGTGTCTCGCTTCAACGAGGAAAGATTACTAGTCAGAGATCTTACCAACGGAATATCACTACTTGCTTTCATATCTGTGGTAAGAGAACAAGAGTTATTGTTCTCTTCT
AGGAAAAGGGCCCCAACAACTTTCTCAGAAGCGTTGACTCGAATCCAAAAGTATATGGACGTAAAAGAGCTACTCCATTCAAAATGGGATCTCAACAAAACTCAAGACCT
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGCAAAGCTTTTCACCCCAGGATCTGGAAACTACACGATCACAGAAGTTAACGACACAGAAAACCCGACCAAGCCTCGAGAACACCATGGTCGACAAAGAAGA
ACCACTTAACCAACATGCAGGAGAATCACAGAAGCATAATGGCGAACTGAAGAATAGAGAATGCGGTCTCGAAGAAATTATAGATCAGACAGATTCGCCATTCGGGGAGG
AGATAATGAGAGGAAAGATCCCTCCAAAATTCAGACTCCCTGCCATAAAGCAATACGACGACTCAACAGATCCTGTAGACCATCTATGCACATATAGGGAATGGATGGAC
CTCTACGGAATAACAGAGGCAATTAGGTGCAAAGTATTCTCTTTCACATTAACCGGCACAACTCGCATATGGTTTCGACAATTGAGAAGAAAATCAATCTTCTCCTTCAA
ACAGCTGGTCAGGGCATTTATCACGCAATTCATTGGAGGGCAGGATAGGAGTCGACCTGTGACCTACCTCTTTACCATAAAACAAAGATCGACAGAGAGCCTTGGAGAAT
ATGTGTCTCGCTTCAACGAGGAAAGATTACTAGTCAGAGATCTTACCAACGGAATATCACTACTTGCTTTCATATCTGTGGTAAGAGAACAAGAGTTATTGTTCTCTTCT
AGGAAAAGGGCCCCAACAACTTTCTCAGAAGCGTTGACTCGAATCCAAAAGTATATGGACGTAAAAGAGCTACTCCATTCAAAATGGGATCTCAACAAAACTCAAGACCT
ATAA
Protein sequenceShow/hide protein sequence
MERQSFSPQDLETTRSQKLTTQKTRPSLENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMD
LYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSS
RKRAPTTFSEALTRIQKYMDVKELLHSKWDLNKTQDL