; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g10540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g10540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr5:8260476..8262511
RNA-Seq ExpressionMoc05g10540
SyntenyMoc05g10540
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0000326 - protein storage vacuole (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5534418.1 hypothetical protein DKX38_017504 [Salix brachista]3.9e-1760.56Show/hide
Query:  QKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLT
        +KAWL DDAR  LQI+NS + ++IG+VN CE VK LL YL FLYSGKGN+S+I+++CK  Y PE  D+ LT
Subjt:  QKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLT

VFQ82639.1 unnamed protein product [Cuscuta campestris]5.1e-1755.84Show/hide
Query:  PLKD-ENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSL
        P KD   +K WL DDAR  LQI+NS +GD++G+V  CE+VK+L+ YLEFLYSGKGN+++I+++CK  Y+ +  DQSL
Subjt:  PLKD-ENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSL

XP_015159219.1 PREDICTED: putative uncharacterized protein DDB_G0292438 [Solanum tuberosum]5.1e-1755.13Show/hide
Query:  PLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
        P  D+ +KAWL DDAR +LQI NS + +++G+VN CE VKEL+ YLE+LYSGKGN+S+I+E+ K  Y+ E   +SLT+
Subjt:  PLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

XP_022850817.1 uncharacterized protein LOC111372670 [Olea europaea var. sylvestris]5.1e-1752.56Show/hide
Query:  PLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
        P KD+ +++WL +DA+  LQI+NS + ++IG++N CE VKEL+ YLEFLYS KGNVS+I+E+C+  Y+ E   +SLT+
Subjt:  PLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

XP_038882618.1 uncharacterized protein LOC120073824 [Benincasa hispida]7.2e-1957.33Show/hide
Query:  DENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
        D N+K W  DD+R +LQIKNS + +I+ +VN CESVK+LL+YL+FLYSGK N++++F++CK +YQP+ G++SLTS
Subjt:  DENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

TrEMBL top hitse value%identityAlignment
A0A484M200 CCHC-type domain-containing protein2.5e-1755.84Show/hide
Query:  PLKD-ENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSL
        P KD   +K WL DDAR  LQI+NS +GD++G+V  CE+VK+L+ YLEFLYSGKGN+++I+++CK  Y+ +  DQSL
Subjt:  PLKD-ENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSL

A0A5N5KU30 Uncharacterized protein7.2e-1734.87Show/hide
Query:  AIPDFSSDLSSTLSLLLLVVAETRATVTAFITVVAFITVALDHR-----HRRQPPSLFNASRGFTGSLFVVHFPLKDE-NQKAWLWDDARPVLQIKNSFE
        ++ + +++   T+  L++ + + RAT+T  +  ++ IT   DH+     +     ++    R       +   P  DE  +K W+ DDAR  LQI+NS +
Subjt:  AIPDFSSDLSSTLSLLLLVVAETRATVTAFITVVAFITVALDHR-----HRRQPPSLFNASRGFTGSLFVVHFPLKDE-NQKAWLWDDARPVLQIKNSFE

Query:  GDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
         +I+G++N CE VKEL+ YLEFLYSGKGN+S+++++CK  Y+ E   +SLT+
Subjt:  GDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

A0A5N5KWB0 Uncharacterized protein1.9e-1760.56Show/hide
Query:  QKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLT
        +KAWL DDAR  LQI+NS + ++IG+VN CE VK LL YL FLYSGKGN+S+I+++CK  Y PE  D+ LT
Subjt:  QKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLT

A5BSK6 Integrase catalytic domain-containing protein1.2e-1653.33Show/hide
Query:  DENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
        +E +K W+ DDAR  LQI+NS + +I+G++N CE VKEL+ YLEFLYSGKGN+S+++++CK  Y+ E   +SLT+
Subjt:  DENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

Q6L3Q0 Polyprotein, putative2.5e-1752.44Show/hide
Query:  VVHFPLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS
        ++  P  D+ +KAWL DDAR +LQI NS + +++G+VN CE VKEL+ YLE+LYSGKGN+S+I+E+ K  Y+ E   +SLT+
Subjt:  VVHFPLKDENQKAWLWDDARPVLQIKNSFEGDIIGMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATACACTATGTTGGGAAAATGCACCAGGCGCAATTCCTGACTTTTCTTCGGATTTGAGTTCTACTCTTTCACTACTGCTTTTGGTTGTTGCAGAGACTAGGGC
CACTGTCACAGCCTTCATCACCGTTGTAGCCTTCATCACCGTCGCACTTGACCACCGTCACCGCCGTCAACCGCCGTCGCTGTTTAATGCTTCCCGTGGGTTCACCGGTT
CGCTGTTTGTGGTTCATTTTCCATTGAAGGATGAGAACCAGAAAGCTTGGTTGTGGGATGATGCTCGACCGGTTCTGCAGATCAAGAATTCGTTTGAGGGTGACATTATT
GGCATGGTCAATGAGTGTGAGTCCGTTAAAGAATTGCTTAAATACTTGGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCAAATATTTGAAATCTGCAAGCGCATCTA
CCAACCAGAGTGTGGTGACCAATCGCTTACAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATACACTATGTTGGGAAAATGCACCAGGCGCAATTCCTGACTTTTCTTCGGATTTGAGTTCTACTCTTTCACTACTGCTTTTGGTTGTTGCAGAGACTAGGGC
CACTGTCACAGCCTTCATCACCGTTGTAGCCTTCATCACCGTCGCACTTGACCACCGTCACCGCCGTCAACCGCCGTCGCTGTTTAATGCTTCCCGTGGGTTCACCGGTT
CGCTGTTTGTGGTTCATTTTCCATTGAAGGATGAGAACCAGAAAGCTTGGTTGTGGGATGATGCTCGACCGGTTCTGCAGATCAAGAATTCGTTTGAGGGTGACATTATT
GGCATGGTCAATGAGTGTGAGTCCGTTAAAGAATTGCTTAAATACTTGGAATTCCTTTATTCTGGAAAAGGAAATGTTAGTCAAATATTTGAAATCTGCAAGCGCATCTA
CCAACCAGAGTGTGGTGACCAATCGCTTACAAGTTAG
Protein sequenceShow/hide protein sequence
MENTLCWENAPGAIPDFSSDLSSTLSLLLLVVAETRATVTAFITVVAFITVALDHRHRRQPPSLFNASRGFTGSLFVVHFPLKDENQKAWLWDDARPVLQIKNSFEGDII
GMVNECESVKELLKYLEFLYSGKGNVSQIFEICKRIYQPECGDQSLTS