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Moc05g10770 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g10770
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:8497886..8498476
RNA-Seq ExpressionMoc05g10770
SyntenyMoc05g10770
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142768.1 uncharacterized protein LOC111012806 [Momordica charantia]3.9e-0683.33Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVR
        MVQPANSANTTE++GLNADNGPQRDL+AR  EDQ+R
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVR

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]3.4e-2677.01Show/hide
Query:  MEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL
        ME+MY EAT+ANRTASPS  PGAPG+K    PS+ PGDREPIPN+ G+DYSLRDND+RKHLT+KKKRASREPEDS SYSR+FSNS+L
Subjt:  MEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]5.2e-1978.26Show/hide
Query:  KVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL
        ++PGAPG+K    PS+ PG+REPIPN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS SYSREFSNS+L
Subjt:  KVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]2.0e-1837.06Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR
        MVQP  SANT E++ LN +N  Q +L+A++ E+Q +AGQE D PRRS R+AN  LPPAHP+  KANRGRGG +                       DD+ 
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR

Query:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSP--SYSREFSNSDLSIS
                                    P   +   P +HP D EP   N+G+DYSLRD+DLRKHLT       R+ ED     Y   F    L ++
Subjt:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSP--SYSREFSNSDLSIS

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]2.0e-1538.07Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR
        MVQP +S NT +++ L A++G QR++ A + E Q+  G   +   RSAR    +L PAHPKP KANRGRGG SR+T+  A P    E    LQ+E++ MR
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR

Query:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSPSYSREFSNSDLSIS
         Q+ TMEEMY E  QA    S S+                             D + RD   DLR HL+ K+  + R+   SPS S + SN     S
Subjt:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSPSYSREFSNSDLSIS

TrEMBL top hitse value%identityAlignment
A0A6J1D8C0 uncharacterized protein LOC1110185612.4e-0664.91Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQ-VRAGQE-GDLPRRSARHANQEL
        MVQPA SANTTE++GLNADNGPQRDL+ARM EDQ  RA +E  D P  S   +N +L
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQ-VRAGQE-GDLPRRSARHANQEL

A0A6J1DNM4 Ribonuclease H1.6e-2677.01Show/hide
Query:  MEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL
        ME+MY EAT+ANRTASPS  PGAPG+K    PS+ PGDREPIPN+ G+DYSLRDND+RKHLT+KKKRASREPEDS SYSR+FSNS+L
Subjt:  MEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL

A0A6J1DPC9 uncharacterized protein LOC1110222802.5e-1978.26Show/hide
Query:  KVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL
        ++PGAPG+K    PS+ PG+REPIPN+EGVDYSLRDNDLRKHLTDKKK+AS EPEDS SYSREFSNS+L
Subjt:  KVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDL

A0A6J1DR60 uncharacterized protein LOC1110234889.6e-1937.06Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR
        MVQP  SANT E++ LN +N  Q +L+A++ E+Q +AGQE D PRRS R+AN  LPPAHP+  KANRGRGG +                       DD+ 
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR

Query:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSP--SYSREFSNSDLSIS
                                    P   +   P +HP D EP   N+G+DYSLRD+DLRKHLT       R+ ED     Y   F    L ++
Subjt:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSP--SYSREFSNSDLSIS

A0A6J1DZJ1 uncharacterized protein LOC1110257389.9e-1638.07Show/hide
Query:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR
        MVQP +S NT +++ L A++G QR++ A + E Q+  G   +   RSAR    +L PAHPKP KANRGRGG SR+T+  A P    E    LQ+E++ MR
Subjt:  MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMR

Query:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSPSYSREFSNSDLSIS
         Q+ TMEEMY E  QA    S S+                             D + RD   DLR HL+ K+  + R+   SPS S + SN     S
Subjt:  HQLRTMEEMYTEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRD--NDLRKHLTDKKKRASREPEDSPSYSREFSNSDLSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCCAGCAAACTCTGCTAATACGACAGAACAGAAGGGTTTGAACGCTGATAACGGCCCTCAGCGAGACCTTAACGCTAGAATGGCTGAGGATCAGGTTCGAGC
AGGGCAAGAGGGAGATCTTCCACGGAGATCGGCCCGCCACGCTAACCAGGAGTTACCCCCTGCTCACCCTAAACCCTCAAAAGCCAACCGAGGCCGAGGAGGGACCTCCA
GAAAGACCTCCCGAAGGGCCAACCCAACGGCAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATGCGCCATCAGTTGCGCACAATGGAAGAAATGTAC
ACCGAGGCAACGCAGGCCAACCGAACAGCATCTCCCTCCAAGGTCCCAGGCGCACCCGGACAGAAGGAAGGACAGGTTCCATCTCTCCACCCTGGCGACCGCGAGCCCAT
TCCCAACAATGAAGGGGTGGATTATAGCTTGCGGGACAATGATCTAAGAAAGCACCTCACGGATAAGAAGAAGAGAGCATCTCGGGAGCCGGAAGACTCTCCGTCCTACT
CCCGAGAGTTCTCCAATTCTGACCTCAGCATAAGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGCCAGCAAACTCTGCTAATACGACAGAACAGAAGGGTTTGAACGCTGATAACGGCCCTCAGCGAGACCTTAACGCTAGAATGGCTGAGGATCAGGTTCGAGC
AGGGCAAGAGGGAGATCTTCCACGGAGATCGGCCCGCCACGCTAACCAGGAGTTACCCCCTGCTCACCCTAAACCCTCAAAAGCCAACCGAGGCCGAGGAGGGACCTCCA
GAAAGACCTCCCGAAGGGCCAACCCAACGGCAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATGCGCCATCAGTTGCGCACAATGGAAGAAATGTAC
ACCGAGGCAACGCAGGCCAACCGAACAGCATCTCCCTCCAAGGTCCCAGGCGCACCCGGACAGAAGGAAGGACAGGTTCCATCTCTCCACCCTGGCGACCGCGAGCCCAT
TCCCAACAATGAAGGGGTGGATTATAGCTTGCGGGACAATGATCTAAGAAAGCACCTCACGGATAAGAAGAAGAGAGCATCTCGGGAGCCGGAAGACTCTCCGTCCTACT
CCCGAGAGTTCTCCAATTCTGACCTCAGCATAAGCCTCTAA
Protein sequenceShow/hide protein sequence
MVQPANSANTTEQKGLNADNGPQRDLNARMAEDQVRAGQEGDLPRRSARHANQELPPAHPKPSKANRGRGGTSRKTSRRANPTADPEALSTLQRELDDMRHQLRTMEEMY
TEATQANRTASPSKVPGAPGQKEGQVPSLHPGDREPIPNNEGVDYSLRDNDLRKHLTDKKKRASREPEDSPSYSREFSNSDLSISL