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Moc05g11280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g11280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:8803032..8804559
RNA-Seq ExpressionMoc05g11280
SyntenyMoc05g11280
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]1.2e-0435.92Show/hide
Query:  AEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLFFDKLHDNTKSFAVTLKSRSGLVGNMVRDFAYKKDPFAPFKSTGIL
        A++P R+      PTEELELVPLLSP++Q SI TKL A  R +L++ LR+N+ +F    H++  S    + +    +    R    K+ P    +S  I+
Subjt:  AEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLFFDKLHDNTKSFAVTLKSRSGLVGNMVRDFAYKKDPFAPFKSTGIL

Query:  NSF
          F
Subjt:  NSF

XP_022149378.1 uncharacterized protein LOC111017809 [Momordica charantia]3.5e-0443.02Show/hide
Query:  MSSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        MS E Y +ALKG +  A              A++P          TEELELVPLLSP+RQ SI TKL A  R + +N LR N+ +F
Subjt:  MSSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]2.7e-0438.82Show/hide
Query:  SSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        S + Y + LKGF                  A++P +       PTEELELVPLLSP++  +I TKL A  R +L+N LR+N+ +F
Subjt:  SSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

XP_022157402.1 uncharacterized protein LOC111024109 [Momordica charantia]4.4e-0750.67Show/hide
Query:  SSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANAT
        S E Y  A+KG TT AA+T    P     +P RGTP EELELVPLL  + Q SID+ L  E + +LV  L+AN T
Subjt:  SSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANAT

XP_022159205.1 uncharacterized protein LOC111025624 [Momordica charantia]2.7e-1256.41Show/hide
Query:  MSSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        MS E Y AA+KG TT AA+T    P     DP+RGTP EELELVPLL P++Q SI ++LRAE + +LV+ L+ANA +F
Subjt:  MSSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H5.8e-0535.92Show/hide
Query:  AEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLFFDKLHDNTKSFAVTLKSRSGLVGNMVRDFAYKKDPFAPFKSTGIL
        A++P R+      PTEELELVPLLSP++Q SI TKL A  R +L++ LR+N+ +F    H++  S    + +    +    R    K+ P    +S  I+
Subjt:  AEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLFFDKLHDNTKSFAVTLKSRSGLVGNMVRDFAYKKDPFAPFKSTGIL

Query:  NSF
          F
Subjt:  NSF

A0A6J1D6M1 Ribonuclease H1.7e-0443.02Show/hide
Query:  MSSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        MS E Y +ALKG +  A              A++P          TEELELVPLLSP+RQ SI TKL A  R + +N LR N+ +F
Subjt:  MSSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

A0A6J1DPX9 uncharacterized protein LOC1110220061.3e-0438.82Show/hide
Query:  SSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        S + Y + LKGF                  A++P +       PTEELELVPLLSP++  +I TKL A  R +L+N LR+N+ +F
Subjt:  SSEYYVAALKGFTTHA-----------AITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

A0A6J1DUD8 uncharacterized protein LOC1110241092.1e-0750.67Show/hide
Query:  SSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANAT
        S E Y  A+KG TT AA+T    P     +P RGTP EELELVPLL  + Q SID+ L  E + +LV  L+AN T
Subjt:  SSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANAT

A0A6J1DY08 uncharacterized protein LOC1110256241.3e-1256.41Show/hide
Query:  MSSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF
        MS E Y AA+KG TT AA+T    P     DP+RGTP EELELVPLL P++Q SI ++LRAE + +LV+ L+ANA +F
Subjt:  MSSEYYVAALKGFTTHAAITAEVPP---RDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCGAATATTATGTCGCGGCATTAAAAGGCTTCACTACCCATGCAGCTATCACAGCTGAGGTCCCACCGCGGGATGACCCGACCCGCGGGACACCAACCGAAGA
ACTTGAGCTTGTGCCACTACTGAGCCCAGATAGACAATTCAGCATCGACACCAAGTTAAGGGCAGAGACTAGGATGAAGCTCGTCAACTTATTGCGAGCCAACGCAACCC
TCTTCTTCGACAAACTCCACGACAACACAAAGAGTTTCGCAGTAACCTTAAAGAGTCGTTCAGGCCTTGTCGGGAACATGGTCAGGGATTTTGCCTATAAAAAGGACCCA
TTTGCTCCATTTAAAAGTACGGGAATCCTAAATTCTTTCTTGAGTTTAGTTCGGCCAGCTACTGACTTTAGCATCGGAGTGTATTCTATCTTGCTGGTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCGAATATTATGTCGCGGCATTAAAAGGCTTCACTACCCATGCAGCTATCACAGCTGAGGTCCCACCGCGGGATGACCCGACCCGCGGGACACCAACCGAAGA
ACTTGAGCTTGTGCCACTACTGAGCCCAGATAGACAATTCAGCATCGACACCAAGTTAAGGGCAGAGACTAGGATGAAGCTCGTCAACTTATTGCGAGCCAACGCAACCC
TCTTCTTCGACAAACTCCACGACAACACAAAGAGTTTCGCAGTAACCTTAAAGAGTCGTTCAGGCCTTGTCGGGAACATGGTCAGGGATTTTGCCTATAAAAAGGACCCA
TTTGCTCCATTTAAAAGTACGGGAATCCTAAATTCTTTCTTGAGTTTAGTTCGGCCAGCTACTGACTTTAGCATCGGAGTGTATTCTATCTTGCTGGTCACCTGA
Protein sequenceShow/hide protein sequence
MSSEYYVAALKGFTTHAAITAEVPPRDDPTRGTPTEELELVPLLSPDRQFSIDTKLRAETRMKLVNLLRANATLFFDKLHDNTKSFAVTLKSRSGLVGNMVRDFAYKKDP
FAPFKSTGILNSFLSLVRPATDFSIGVYSILLVT