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Moc05g12190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g12190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr5:9532090..9532464
RNA-Seq ExpressionMoc05g12190
SyntenyMoc05g12190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7129225.1 hypothetical protein RHSIM_Rhsim10G0050800 [Rhododendron simsii]4.9e-1546.59Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
        MGNE +S + G+GDVCL+T  G K  L+D R++P+   NL+S GKLDD+GY + F  G WKL + S VVA   K S++Y+ + ++++G
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
KAF7129546.1 hypothetical protein RHSIM_Rhsim10G0154200 [Rhododendron simsii]6.4e-1545.45Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
        MGNE +S + G+GDVCL+T  G K  L+D R++P    NL+S GKLDD+GY + F  G WKL + S +VA   K S++Y+ + ++++G
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
RVW14266.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.4e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
RVW84195.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]6.4e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
RVW91307.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.8e-1647.73Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
        MGNE++S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA  +K  S+Y  + ++ +G
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
TrEMBL top hitse value%identityAlignment
A0A438BTH6 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
A0A438E432 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
A0A438HI91 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
A0A438I3N7 Retrovirus-related Pol polyprotein from transposon TNT 1-942.8e-1647.73Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
        MGNE++S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA  +K  S+Y  + ++ +G
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
A0A438IBT7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-1547.13Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
        MGNE +S + G+GD+CL+T  G K  LRD R++P    NL+S GKLDD+GY+++FS G WKL + S VVA   K  S+Y  + ++ +
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVAR
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1139.77Show/hide
Query:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
        MGN S S + GIGD+C+KT  G    L+D R++P    NL+S   LD DGY S F+   W+L + S V+A      ++Y +  E+ +G
Subjt:  MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARG
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGAGAGTATCTCCAATGTGAGGGGAATTGGAGATGTTTGTTTGAAGACAGGCAAAGGGGTCAAGTTTGGCCTACGAGACGACAGGTATATTCCTAGCTTCAT
ATATAATTTGTTATCTGTAGGGAAACTAGATGACGATGGTTACAGTAGTGACTTTAGTGGGGGTTGCTGGAAGCTCAAGAGGGAATCCAGTGTGGTGGCAACATGCCACA
AGATATCTTCTGTTTATGTGTCCGAGTTTGAGGTTGCCAGGGGATCTGAAAGACAGAGGATGCATAGTCTAGCTGCAAATGGTTCAAGGCGAGACTTAAAAGAATCAGCA
GCATTGACAACCAAGACAGATCAGAAGAATCTGCCATCAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGAGAGTATCTCCAATGTGAGGGGAATTGGAGATGTTTGTTTGAAGACAGGCAAAGGGGTCAAGTTTGGCCTACGAGACGACAGGTATATTCCTAGCTTCAT
ATATAATTTGTTATCTGTAGGGAAACTAGATGACGATGGTTACAGTAGTGACTTTAGTGGGGGTTGCTGGAAGCTCAAGAGGGAATCCAGTGTGGTGGCAACATGCCACA
AGATATCTTCTGTTTATGTGTCCGAGTTTGAGGTTGCCAGGGGATCTGAAAGACAGAGGATGCATAGTCTAGCTGCAAATGGTTCAAGGCGAGACTTAAAAGAATCAGCA
GCATTGACAACCAAGACAGATCAGAAGAATCTGCCATCAACTTAA
Protein sequenceShow/hide protein sequence
MGNESISNVRGIGDVCLKTGKGVKFGLRDDRYIPSFIYNLLSVGKLDDDGYSSDFSGGCWKLKRESSVVATCHKISSVYVSEFEVARGSERQRMHSLAANGSRRDLKESA
ALTTKTDQKNLPST