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Moc05g12590 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g12590
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:9733144..9737253
RNA-Seq ExpressionMoc05g12590
SyntenyMoc05g12590
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY89059.1 hypothetical protein Acr_06g0009990 [Actinidia rufa]9.3e-1043.02Show/hide
Query:  PLRLVLQKPDVSSRLMKWEM-------------EPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA
        PL+ +LQ+PD S RL+KW +             EP S+  L  W  FVD S+N  GCGA LV+ +P+   +E A+R GFK  NN+A
Subjt:  PLRLVLQKPDVSSRLMKWEM-------------EPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA

XP_022142783.1 uncharacterized protein LOC111012821 [Momordica charantia]4.2e-1037.93Show/hide
Query:  LPLRLVLQKPDVSSRLMKWEMEPG--------------------------------SDLSL----------ELWRTFVDDSANNRGCGARLVVISPIRTC
        LPL+ VLQKP+ S RLMKW +E G                                 D+ L          ELW  +VD S+N +GCGA +V++SP + C
Subjt:  LPLRLVLQKPDVSSRLMKWEMEPG--------------------------------SDLSL----------ELWRTFVDDSANNRGCGARLVVISPIRTC

Query:  IEVAVRFGFKTLNNDA
        +EVA+RFGFKT N +A
Subjt:  IEVAVRFGFKTLNNDA

XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]7.4e-0736.36Show/hide
Query:  PLRLVLQKPDVSSRLMKWEME---------PGSDLSL----------------------------ELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVR
        PLR VLQKPD S RL+KW +E         P + +                              +LW  +VD S+N RGCGARL++ISP +   E A+R
Subjt:  PLRLVLQKPDVSSRLMKWEME---------PGSDLSL----------------------------ELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVR

Query:  FGFKTLNNDA
        F F   NN+A
Subjt:  FGFKTLNNDA

XP_022894051.1 uncharacterized protein LOC111408536 [Olea europaea var. sylvestris]7.4e-0730.33Show/hide
Query:  MLEPIVSGCSRMYLPLRLVLQKPDVSSRLMKWEME----------------------------------PGSDLSLELWRTFVDDSANNRGCGARLVVIS
        +++ +  G   +Y PL+ +LQKPDVS RL++WE+E                                    S  S+ +W  FVD ++N+ G GA +++IS
Subjt:  MLEPIVSGCSRMYLPLRLVLQKPDVSSRLMKWEME----------------------------------PGSDLSLELWRTFVDDSANNRGCGARLVVIS

Query:  P-IRTCIEVAVRFGFKTLNNDA
        P +   I+ A+RF F+  NN+A
Subjt:  P-IRTCIEVAVRFGFKTLNNDA

XP_034213078.1 uncharacterized protein LOC117625661 [Prunus dulcis]7.4e-0732.54Show/hide
Query:  PLRLVLQKPDVSSRLMKWEMEPGS-----------------------------------------------------DLSLELWRTFVDDSANNRGCGAR
        PLR VLQKP+ S RL+KW +E G                                                      DL+  LW  FVD S+N +GCGA 
Subjt:  PLRLVLQKPDVSSRLMKWEMEPGS-----------------------------------------------------DLSLELWRTFVDDSANNRGCGAR

Query:  LVVISPIRTCIEVAVRFGFKTLNNDA
        LV+ISP +  +E A+RF F+  NN+A
Subjt:  LVVISPIRTCIEVAVRFGFKTLNNDA

TrEMBL top hitse value%identityAlignment
A0A2N9G140 Ribonuclease H7.2e-0843.24Show/hide
Query:  LPLRLVLQKPDVSSRLMKWEMEPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA
        LPL+++LQ+ D + R+ +W    G DL  E W  FVD ++N++G GA +V+ISP    +E AV+  F  LNN+A
Subjt:  LPLRLVLQKPDVSSRLMKWEMEPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA

A0A5E4G9U1 PREDICTED: rve domain-containing (Fragment)3.6e-0732.54Show/hide
Query:  PLRLVLQKPDVSSRLMKWEMEPGS-----------------------------------------------------DLSLELWRTFVDDSANNRGCGAR
        PLR VLQKP+ S RL+KW +E G                                                      DL+  LW  FVD S+N +GCGA 
Subjt:  PLRLVLQKPDVSSRLMKWEMEPGS-----------------------------------------------------DLSLELWRTFVDDSANNRGCGAR

Query:  LVVISPIRTCIEVAVRFGFKTLNNDA
        LV+ISP +  +E A+RF F+  NN+A
Subjt:  LVVISPIRTCIEVAVRFGFKTLNNDA

A0A6J1CP54 uncharacterized protein LOC1110128212.0e-1037.93Show/hide
Query:  LPLRLVLQKPDVSSRLMKWEMEPG--------------------------------SDLSL----------ELWRTFVDDSANNRGCGARLVVISPIRTC
        LPL+ VLQKP+ S RLMKW +E G                                 D+ L          ELW  +VD S+N +GCGA +V++SP + C
Subjt:  LPLRLVLQKPDVSSRLMKWEMEPG--------------------------------SDLSL----------ELWRTFVDDSANNRGCGARLVVISPIRTC

Query:  IEVAVRFGFKTLNNDA
        +EVA+RFGFKT N +A
Subjt:  IEVAVRFGFKTLNNDA

A0A6J1DJC7 Ribonuclease H3.6e-0736.36Show/hide
Query:  PLRLVLQKPDVSSRLMKWEME---------PGSDLSL----------------------------ELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVR
        PLR VLQKPD S RL+KW +E         P + +                              +LW  +VD S+N RGCGARL++ISP +   E A+R
Subjt:  PLRLVLQKPDVSSRLMKWEME---------PGSDLSL----------------------------ELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVR

Query:  FGFKTLNNDA
        F F   NN+A
Subjt:  FGFKTLNNDA

A0A7J0EST1 Ribonuclease H4.5e-1043.02Show/hide
Query:  PLRLVLQKPDVSSRLMKWEM-------------EPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA
        PL+ +LQ+PD S RL+KW +             EP S+  L  W  FVD S+N  GCGA LV+ +P+   +E A+R GFK  NN+A
Subjt:  PLRLVLQKPDVSSRLMKWEM-------------EPGSDLSLELWRTFVDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGGTCGATACAAGGAGTCCTTTGGAGGGAAGACTACTGGGACCTTGGGTATAAATGGTCAAGGGCCAATAGATGGTGAAGTCATCGGGGCCTCGGGTATAAA
TGGTCGAGGGCCGATGCTACAGGGTCGGGGCTCTGGGTATAAATGGTGTTGCTGGAACCTGAATGAAGAAGCTTCTATGCTGGAGCCTATTGTTTCCGGATGCTCTAGAA
TGTACCTCCCTTTGAGGCTGGTCTTACAGAAACCAGATGTGTCAAGTCGGCTTATGAAATGGGAGATGGAACCCGGATCAGACCTATCTTTAGAGTTATGGAGAACTTTT
GTGGATGATTCTGCCAACAATCGCGGATGTGGAGCAAGGCTAGTAGTTATTTCCCCAATCAGAACCTGCATAGAAGTAGCCGTGCGATTTGGGTTCAAAACCTTGAACAA
TGATGCTAACACGGATGAAGAACAAGAAGTTGCTGTGAGATTTATCGTCCAGCCCAGTATAGGTGTAACGCCCCAGGAATTTCACCATTTCCAAACAGGGACCGTTACTA
AGACTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGGTCGATACAAGGAGTCCTTTGGAGGGAAGACTACTGGGACCTTGGGTATAAATGGTCAAGGGCCAATAGATGGTGAAGTCATCGGGGCCTCGGGTATAAA
TGGTCGAGGGCCGATGCTACAGGGTCGGGGCTCTGGGTATAAATGGTGTTGCTGGAACCTGAATGAAGAAGCTTCTATGCTGGAGCCTATTGTTTCCGGATGCTCTAGAA
TGTACCTCCCTTTGAGGCTGGTCTTACAGAAACCAGATGTGTCAAGTCGGCTTATGAAATGGGAGATGGAACCCGGATCAGACCTATCTTTAGAGTTATGGAGAACTTTT
GTGGATGATTCTGCCAACAATCGCGGATGTGGAGCAAGGCTAGTAGTTATTTCCCCAATCAGAACCTGCATAGAAGTAGCCGTGCGATTTGGGTTCAAAACCTTGAACAA
TGATGCTAACACGGATGAAGAACAAGAAGTTGCTGTGAGATTTATCGTCCAGCCCAGTATAGGTGTAACGCCCCAGGAATTTCACCATTTCCAAACAGGGACCGTTACTA
AGACTACCTAA
Protein sequenceShow/hide protein sequence
MAEGRYKESFGGKTTGTLGINGQGPIDGEVIGASGINGRGPMLQGRGSGYKWCCWNLNEEASMLEPIVSGCSRMYLPLRLVLQKPDVSSRLMKWEMEPGSDLSLELWRTF
VDDSANNRGCGARLVVISPIRTCIEVAVRFGFKTLNNDANTDEEQEVAVRFIVQPSIGVTPQEFHHFQTGTVTKTT