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Moc05g12840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g12840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:9886097..9886543
RNA-Seq ExpressionMoc05g12840
SyntenyMoc05g12840
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]1.2e-1238Show/hide
Query:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        +   ++  +L    EAL+  C+  +   +  G+  + PFT+ ++  P+ PK K P +KPYDGS DP D+++++ESLM+   A D +KCRAF + L G AR
Subjt:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

XP_022150318.1 uncharacterized protein LOC111018515 [Momordica charantia]6.1e-2087.93Show/hide
Query:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS
        MAYPL  KMKKPDMKPYDGSTDPIDHI+LYE LMELN  GDEMKC+AFSVTLKGQARS
Subjt:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS

XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]1.6e-1779.31Show/hide
Query:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS
        MAYPL PKMKKPDMKPYD   +PIDHI+LYE LMEL+  GD+MKCRAFSVTLKG+ARS
Subjt:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]2.5e-1338Show/hide
Query:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        +   ++  +L    EAL+  C+  D   +  G+  +PPFT+ ++  P+ PK K P +KPYDG+ DP D+++++E LM+   A D +KCRAF + L G AR
Subjt:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]5.5e-1342.39Show/hide
Query:  KLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        K     EAL+  C+  + C  + G+  + PFT+ I+  P+ PK K P MKPYDGS DP D+++++E LM+   A D +KCRAF + L   AR
Subjt:  KLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088135.9e-1338Show/hide
Query:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        +   ++  +L    EAL+  C+  +   +  G+  + PFT+ ++  P+ PK K P +KPYDGS DP D+++++ESLM+   A D +KCRAF + L G AR
Subjt:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

A0A6J1D949 uncharacterized protein LOC1110185152.9e-2087.93Show/hide
Query:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS
        MAYPL  KMKKPDMKPYDGSTDPIDHI+LYE LMELN  GDEMKC+AFSVTLKGQARS
Subjt:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS

A0A6J1DDJ7 uncharacterized protein LOC1110195238.0e-1879.31Show/hide
Query:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS
        MAYPL PKMKKPDMKPYD   +PIDHI+LYE LMEL+  GD+MKCRAFSVTLKG+ARS
Subjt:  MAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS

A0A6J1DXR9 uncharacterized protein LOC1110251091.2e-1338Show/hide
Query:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        +   ++  +L    EAL+  C+  D   +  G+  +PPFT+ ++  P+ PK K P +KPYDG+ DP D+++++E LM+   A D +KCRAF + L G AR
Subjt:  DSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

A0A6J1DY58 uncharacterized protein LOC1110256632.7e-1342.39Show/hide
Query:  KLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR
        K     EAL+  C+  + C  + G+  + PFT+ I+  P+ PK K P MKPYDGS DP D+++++E LM+   A D +KCRAF + L   AR
Subjt:  KLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGSTDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATAAGCGTAATGCACCTCAACAAGCGGGTCAGCAAACTCTGGCTACACCGAATTGGGGGTTTGCTCTTGCAACAGGTGGGGTGACCGCCACTACATCTACATA
TCAGACCACGGTCGATGTACCGGAGGTAAATGATTCCATGAAAGAAGTAATCAGTAAACTTCAGAACGATTTTGAGGCTTTGAGGCAAAGCTGTAAGACTGATGACGCCT
GTTGGGTAGAGCAGGGTGAGCGGGAGGATCCTCCTTTCACGGCTCCCATAATGGCATATCCACTCCAACCGAAGATGAAGAAACCTGACATGAAACCGTACGATGGATCA
ACCGACCCGATTGATCACATCGACTTGTACGAAAGCTTGATGGAATTAAATACTGCAGGGGACGAAATGAAATGTCGGGCTTTCTCTGTCACTCTGAAGGGCCAAGCTAG
ATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATAAGCGTAATGCACCTCAACAAGCGGGTCAGCAAACTCTGGCTACACCGAATTGGGGGTTTGCTCTTGCAACAGGTGGGGTGACCGCCACTACATCTACATA
TCAGACCACGGTCGATGTACCGGAGGTAAATGATTCCATGAAAGAAGTAATCAGTAAACTTCAGAACGATTTTGAGGCTTTGAGGCAAAGCTGTAAGACTGATGACGCCT
GTTGGGTAGAGCAGGGTGAGCGGGAGGATCCTCCTTTCACGGCTCCCATAATGGCATATCCACTCCAACCGAAGATGAAGAAACCTGACATGAAACCGTACGATGGATCA
ACCGACCCGATTGATCACATCGACTTGTACGAAAGCTTGATGGAATTAAATACTGCAGGGGACGAAATGAAATGTCGGGCTTTCTCTGTCACTCTGAAGGGCCAAGCTAG
ATCCTAG
Protein sequenceShow/hide protein sequence
MSNKRNAPQQAGQQTLATPNWGFALATGGVTATTSTYQTTVDVPEVNDSMKEVISKLQNDFEALRQSCKTDDACWVEQGEREDPPFTAPIMAYPLQPKMKKPDMKPYDGS
TDPIDHIDLYESLMELNTAGDEMKCRAFSVTLKGQARS