; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g14100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosomal protein L2
Genome locationchr5:10773222..10774565
RNA-Seq ExpressionMoc05g14100
SyntenyMoc05g14100
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR014722 - Ribosomal protein L2, domain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARX11148.1 ribosomal protein L2 [Triantha glutinosa]4.2e-2164.63Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPATRYEILD+NS++GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

GER48855.1 ribosomal protein L2 [Striga asiatica]4.2e-2165.79Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDRLSLGVSNKIDEEGAEQVYKELKSR
        +EGGSQLAASWPRPPA RYEILDLNSK+GN IP ADIR+GTWVHDIECHPD         +   GA ++ K  +SR
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDRLSLGVSNKIDEEGAEQVYKELKSR

QKO27837.1 ribosomal protein L2, partial [Tofieldia coccinea]4.2e-2164.63Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPATRYEILD+NS++GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

XP_019703146.1 uncharacterized protein LOC109505206 [Elaeis guineensis]4.2e-2165.85Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA RYEILDLNSK+GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

YP_005090371.1 ribosomal protein L2 [Phoenix dactylifera]4.2e-2165.85Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA RYEILDLNSK+GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

TrEMBL top hitse value%identityAlignment
A0A1Z1R090 Ribosomal protein L22.0e-2164.63Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPATRYEILD+NS++GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

A0A2Z2CEI4 Ribosomal protein L22.0e-2165.85Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA RYEILDLNSK+GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

A0A5A7QU50 Ribosomal protein L22.0e-2165.79Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDRLSLGVSNKIDEEGAEQVYKELKSR
        +EGGSQLAASWPRPPA RYEILDLNSK+GN IP ADIR+GTWVHDIECHPD         +   GA ++ K  +SR
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDRLSLGVSNKIDEEGAEQVYKELKSR

A0A6J0PD90 uncharacterized protein LOC1095052062.0e-2165.85Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA RYEILDLNSK+GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

G9HNT1 Ribosomal protein L22.0e-2165.85Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA RYEILDLNSK+GNCIP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

SwissProt top hitse value%identityAlignment
F4HSD4 Probable GTP-binding protein OBGM, mitochondrial3.9e-0944.12Show/hide
Query:  ILDLNSKIGNC---IPFADIRIGTWVHDIECH----PDRLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLV--NGETSYR
        ++DL S +  C    P+  +R    V ++E H     DR SL V+NKIDEEGAE+  KELK RV G   F    + +  +  LK GLK LV  NGE S R
Subjt:  ILDLNSKIGNC---IPFADIRIGTWVHDIECH----PDRLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLV--NGETSYR

Query:  LK
        LK
Subjt:  LK

P0C8K6 60S ribosomal protein L2, mitochondrial2.3e-2263.41Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA R+EILDLNSK+GN IP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

P92812 60S ribosomal protein L2, mitochondrial2.3e-2263.41Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA R+EILDLNSK+GN IP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

Q2F969 60S ribosomal protein L2, mitochondrial2.3e-2263.41Show/hide
Query:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV
        +EGGSQLAASWPRPPA R+EILDLNSK+GN IP ADIR+GTWVHDIECHP +      + G   KI +E A Q    L S V
Subjt:  MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDR-----LSLGVSNKIDEEGAEQVYKELKSRV

Q2QZ37 Probable GTP-binding protein OBGM, mitochondrial4.0e-0646.3Show/hide
Query:  RLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLVN
        R SL V+NKIDEEGA+++Y+ELK RV G P F    + +  + +L+ GL++L++
Subjt:  RLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLVN

Arabidopsis top hitse value%identityAlignment
AT1G07615.1 GTP-binding protein Obg/CgtA2.7e-1044.12Show/hide
Query:  ILDLNSKIGNC---IPFADIRIGTWVHDIECH----PDRLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLV--NGETSYR
        ++DL S +  C    P+  +R    V ++E H     DR SL V+NKIDEEGAE+  KELK RV G   F    + +  +  LK GLK LV  NGE S R
Subjt:  ILDLNSKIGNC---IPFADIRIGTWVHDIECH----PDRLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLV--NGETSYR

Query:  LK
        LK
Subjt:  LK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGCCACGCCCCCCTGCAACTAGATACGAGATACTTGATCTAAATTCGAAAATAGGAAATTGCATACCATTCGCCGATAT
ACGTATAGGAACATGGGTACATGATATAGAATGTCATCCAGATCGGCTATCGTTAGGGGTGTCCAACAAGATCGACGAAGAGGGGGCCGAGCAAGTGTACAAGGAGTTAA
AATCGAGAGTGCACGGGTTCCCATCTTTCGTGTCTGTGATGTTATGGAAGAGGGTGTTGCAGAACTTAAAAGCTGGTCTTAAGAACCTTGTGAATGGTGAAACATCTTAT
AGACTTAAAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGCCACGCCCCCCTGCAACTAGATACGAGATACTTGATCTAAATTCGAAAATAGGAAATTGCATACCATTCGCCGATAT
ACGTATAGGAACATGGGTACATGATATAGAATGTCATCCAGATCGGCTATCGTTAGGGGTGTCCAACAAGATCGACGAAGAGGGGGCCGAGCAAGTGTACAAGGAGTTAA
AATCGAGAGTGCACGGGTTCCCATCTTTCGTGTCTGTGATGTTATGGAAGAGGGTGTTGCAGAACTTAAAAGCTGGTCTTAAGAACCTTGTGAATGGTGAAACATCTTAT
AGACTTAAAAGGTAG
Protein sequenceShow/hide protein sequence
MEGGSQLAASWPRPPATRYEILDLNSKIGNCIPFADIRIGTWVHDIECHPDRLSLGVSNKIDEEGAEQVYKELKSRVHGFPSFVSVMLWKRVLQNLKAGLKNLVNGETSY
RLKR