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Moc05g14190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr5:10799790..10804213
RNA-Seq ExpressionMoc05g14190
SyntenyMoc05g14190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152369.1 uncharacterized protein K02A2.6-like [Momordica charantia]1.1e-1678.21Show/hide
Query:  LEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVA
        +EESSS SS GKTPSLSSLNVSDPNFVAT E S +EV LTKVVKKT+KKK VAEIAP AISR RTR+A+A L AQK A
Subjt:  LEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVA

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.5e-8753.59Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK
        +DVPSEA+EESSSSSS                                                GA+SRPRTR+A+A LAAQK A+AG SKKAK ARV +
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK

Query:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVEN-----------------------------------
         AEEPLEE N+EEP+STEQT SRVKRVRL VRRP FT R++LL RGFDEAQEPV EYVR+R+VEN                                   
Subjt:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVEN-----------------------------------

Query:  GNEILVHPSDEQVEEARRLICRPHKTWTVSTTGKLSLKALDINEQVTV----------------------------------------------------
        GNEILVHPSDEQVEEARRLICRPHKTWT+ST GKLSLK LDINEQ TV                                                    
Subjt:  GNEILVHPSDEQVEEARRLICRPHKTWTVSTTGKLSLKALDINEQVTV----------------------------------------------------

Query:  -GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDELRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA
         GVEA DA VV PKKP  SLR+V GYS++RE DSPITAADPETRGVVTREQYDELRHKYELLLVTQ ATCAFL+K+Y DE PSFPDELAA
Subjt:  -GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDELRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]1.9e-4566.09Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK
        +DVP+EALEESSSSSS GK+PSLSSLNVSDPNFVA A TS+E+V LTKVVKK + KK + EI PGA SRP TR+ IA LAAQK A+AG  KKAKR +  +
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK

Query:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVENGNEILVHPS
         +EEPL+E N EE +S EQT S+ KRVR  V+R NFTARE+L+ +GFDEAQEPV +Y++RRL+ENG E L  P+
Subjt:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVENGNEILVHPS

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]1.4e-1382.81Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAP
        +DV SEA+EESSSS S  KT SLSSLNVSDPNFVATAE SDEEV+L KVVKKTQKKKKVAEI P
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAP

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]1.4e-2469.57Show/hide
Query:  GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDE---LRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA
        GVEAD   VV  KK  TS+RRV GY ++RE DSPITAADP+TRGVVTREQYDE   LRH Y+LL  TQHATC FL+K+Y D  PS PDELAA
Subjt:  GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDE---LRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA

TrEMBL top hitse value%identityAlignment
A0A6J1DFT9 uncharacterized protein K02A2.6-like5.2e-1778.21Show/hide
Query:  LEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVA
        +EESSS SS GKTPSLSSLNVSDPNFVAT E S +EV LTKVVKKT+KKK VAEIAP AISR RTR+A+A L AQK A
Subjt:  LEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVA

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220077.3e-8853.59Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK
        +DVPSEA+EESSSSSS                                                GA+SRPRTR+A+A LAAQK A+AG SKKAK ARV +
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK

Query:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVEN-----------------------------------
         AEEPLEE N+EEP+STEQT SRVKRVRL VRRP FT R++LL RGFDEAQEPV EYVR+R+VEN                                   
Subjt:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVEN-----------------------------------

Query:  GNEILVHPSDEQVEEARRLICRPHKTWTVSTTGKLSLKALDINEQVTV----------------------------------------------------
        GNEILVHPSDEQVEEARRLICRPHKTWT+ST GKLSLK LDINEQ TV                                                    
Subjt:  GNEILVHPSDEQVEEARRLICRPHKTWTVSTTGKLSLKALDINEQVTV----------------------------------------------------

Query:  -GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDELRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA
         GVEA DA VV PKKP  SLR+V GYS++RE DSPITAADPETRGVVTREQYDELRHKYELLLVTQ ATCAFL+K+Y DE PSFPDELAA
Subjt:  -GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDELRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA

A0A6J1DRR9 uncharacterized protein LOC1110237617.0e-1482.81Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAP
        +DV SEA+EESSSS S  KT SLSSLNVSDPNFVATAE SDEEV+L KVVKKTQKKKKVAEI P
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAP

A0A6J1DW11 uncharacterized protein LOC1110236209.1e-4666.09Show/hide
Query:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK
        +DVP+EALEESSSSSS GK+PSLSSLNVSDPNFVA A TS+E+V LTKVVKK + KK + EI PGA SRP TR+ IA LAAQK A+AG  KKAKR +  +
Subjt:  MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPK

Query:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVENGNEILVHPS
         +EEPL+E N EE +S EQT S+ KRVR  V+R NFTARE+L+ +GFDEAQEPV +Y++RRL+ENG E L  P+
Subjt:  GAEEPLEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVENGNEILVHPS

A0A6J1E204 uncharacterized protein LOC1110257026.8e-2569.57Show/hide
Query:  GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDE---LRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA
        GVEAD   VV  KK  TS+RRV GY ++RE DSPITAADP+TRGVVTREQYDE   LRH Y+LL  TQHATC FL+K+Y D  PS PDELAA
Subjt:  GVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDE---LRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCCCTAGTGAGGCCTTGGAGGAATCATCTTCCTCTTCTTCACTAGGCAAGACCCCATCTTTGTCGAGTTTGAATGTTTCTGACCCAAATTTTGTTGCT
ACTGCAGAGACTTCAGATGAGGAGGTGAGCTTGACCAAAGTGGTGAAGAAAACACAAAAGAAGAAGAAAGTGGCAGAAATTGCGCCTGGCGCAATTTCTCGTCCT
AGGACCCGATCTGCTATAGCACCTTTGGCTGCCCAGAAAGTAGCCAAGGCTGGTACATCTAAAAAAGCCAAGAGGGCTAGGGTGCCTAAAGGCGCAGAAGAGCCA
CTTGAAGAGACCAACAAAGAGGAACCTAATTCTACAGAACAAACACTATCAAGAGTAAAACGGGTGAGATTGGTGGTGCGAAGGCCCAACTTCACAGCACGTGAA
GTCCTACTTGGGAGGGGCTTTGATGAAGCACAAGAGCCCGTGCTGGAATATGTTAGGAGGAGGCTTGTGGAGAATGGTAATGAGATTTTGGTGCATCCATCGGAC
GAGCAAGTGGAGGAGGCGCGTAGGCTTATTTGTAGGCCACACAAGACTTGGACCGTCTCAACCACGGGGAAGCTTTCCTTAAAGGCCCTTGACATCAATGAGCAA
GTGACGGTGGGAGTAGAGGCCGATGATGCGAAAGTAGTGACTCCCAAAAAGCCGAACACATCCCTAAGAAGAGTTCCGGGATATTCGCTTATTCGAGAGGGAGAT
TCTCCCATTACCGCCGCAGATCCTGAGACCCGAGGAGTGGTGACTAGGGAGCAATATGACGAGCTTAGGCATAAGTACGAGCTTCTTTTGGTTACTCAACATGCC
ACTTGTGCTTTCCTAGAGAAGGTATACAGTGATGAAACACCTTCTTTCCCCGATGAGCTTGCGGCCATTTACCATCCTCTTCCCGTCTTCCTACCGATTCCACAG
ACGATGAGTCTTCCGATGATGAATAGGGGAGAAATCGAGGAGACAATGTCCGAAGCCATGCCATATTTGGAAAGGAGAATGGAAGAAGAAGAAGGAGAGCAACAA
GGAAGCAATTTTGAGCCGCCCACTCAAGGATCCCAAACACCTCAAGAGGCCGAGCCAAATGAGGAGACCCAACATGACAATCAAGTGCCATCTTTGAGAAGAAGG
AAGAAAATGAAGTTTTTCAACTTCATCAAGGTAAACAACTTGATTCGAGGACGAATCCAATTCAAGAAAGAGGAGATGATGCGATCATATTTGGCCCAACACTCC
AAGATGACACCTACACCAACAATGAAGAGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTCCCTAGTGAGGCCTTGGAGGAATCATCTTCCTCTTCTTCACTAGGCAAGACCCCATCTTTGTCGAGTTTGAATGTTTCTGACCCAAATTTTGTTGCT
ACTGCAGAGACTTCAGATGAGGAGGTGAGCTTGACCAAAGTGGTGAAGAAAACACAAAAGAAGAAGAAAGTGGCAGAAATTGCGCCTGGCGCAATTTCTCGTCCT
AGGACCCGATCTGCTATAGCACCTTTGGCTGCCCAGAAAGTAGCCAAGGCTGGTACATCTAAAAAAGCCAAGAGGGCTAGGGTGCCTAAAGGCGCAGAAGAGCCA
CTTGAAGAGACCAACAAAGAGGAACCTAATTCTACAGAACAAACACTATCAAGAGTAAAACGGGTGAGATTGGTGGTGCGAAGGCCCAACTTCACAGCACGTGAA
GTCCTACTTGGGAGGGGCTTTGATGAAGCACAAGAGCCCGTGCTGGAATATGTTAGGAGGAGGCTTGTGGAGAATGGTAATGAGATTTTGGTGCATCCATCGGAC
GAGCAAGTGGAGGAGGCGCGTAGGCTTATTTGTAGGCCACACAAGACTTGGACCGTCTCAACCACGGGGAAGCTTTCCTTAAAGGCCCTTGACATCAATGAGCAA
GTGACGGTGGGAGTAGAGGCCGATGATGCGAAAGTAGTGACTCCCAAAAAGCCGAACACATCCCTAAGAAGAGTTCCGGGATATTCGCTTATTCGAGAGGGAGAT
TCTCCCATTACCGCCGCAGATCCTGAGACCCGAGGAGTGGTGACTAGGGAGCAATATGACGAGCTTAGGCATAAGTACGAGCTTCTTTTGGTTACTCAACATGCC
ACTTGTGCTTTCCTAGAGAAGGTATACAGTGATGAAACACCTTCTTTCCCCGATGAGCTTGCGGCCATTTACCATCCTCTTCCCGTCTTCCTACCGATTCCACAG
ACGATGAGTCTTCCGATGATGAATAGGGGAGAAATCGAGGAGACAATGTCCGAAGCCATGCCATATTTGGAAAGGAGAATGGAAGAAGAAGAAGGAGAGCAACAA
GGAAGCAATTTTGAGCCGCCCACTCAAGGATCCCAAACACCTCAAGAGGCCGAGCCAAATGAGGAGACCCAACATGACAATCAAGTGCCATCTTTGAGAAGAAGG
AAGAAAATGAAGTTTTTCAACTTCATCAAGGTAAACAACTTGATTCGAGGACGAATCCAATTCAAGAAAGAGGAGATGATGCGATCATATTTGGCCCAACACTCC
AAGATGACACCTACACCAACAATGAAGAGGAACTAG
Protein sequenceShow/hide protein sequence
MDVPSEALEESSSSSSLGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVVKKTQKKKKVAEIAPGAISRPRTRSAIAPLAAQKVAKAGTSKKAKRARVPKGAEEP
LEETNKEEPNSTEQTLSRVKRVRLVVRRPNFTAREVLLGRGFDEAQEPVLEYVRRRLVENGNEILVHPSDEQVEEARRLICRPHKTWTVSTTGKLSLKALDINEQ
VTVGVEADDAKVVTPKKPNTSLRRVPGYSLIREGDSPITAADPETRGVVTREQYDELRHKYELLLVTQHATCAFLEKVYSDETPSFPDELAAIYHPLPVFLPIPQ
TMSLPMMNRGEIEETMSEAMPYLERRMEEEEGEQQGSNFEPPTQGSQTPQEAEPNEETQHDNQVPSLRRRKKMKFFNFIKVNNLIRGRIQFKKEEMMRSYLAQHS
KMTPTPTMKRN