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Moc05g14200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
Genome locationchr5:10804257..10805336
RNA-Seq ExpressionMoc05g14200
SyntenyMoc05g14200
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144472.1 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia]7.4e-1382.69Show/hide
Query:  IEQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELP
        +EQERTT KI EILVALNEARGEDPLED+GN+ A QGQLN+DGEDE LGELP
Subjt:  IEQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELP

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.6e-0780.49Show/hide
Query:  QLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVREST
        QLN+D EDE  GELPQEVHGDEFE+EEDNDDISQYEV+  T
Subjt:  QLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVREST

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]1.3e-2544.67Show/hide
Query:  MEGSSSFKPYDIEKEKKKVLLPPPTKP-----------------------------------GMIPLETSRISH-------EKLVFDPRDK---------
        MEGSS  KP D E EKKKV+LPPP  P                                     +    +RI+        E+ ++D +++         
Subjt:  MEGSSSFKPYDIEKEKKKVLLPPPTKP-----------------------------------GMIPLETSRISH-------EKLVFDPRDK---------

Query:  ----RRKYEEAIRMKARGNLSI-EQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVR
            +R  E + RM     + + EQERTTSKI +ILVALNEA GEDPLED+GNS   QG+LN+DGEDE LG+LPQEVHGDE EEEE+NDDISQYEVR
Subjt:  ----RRKYEEAIRMKARGNLSI-EQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVR

TrEMBL top hitse value%identityAlignment
A0A6J1CTS8 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like3.6e-1382.69Show/hide
Query:  IEQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELP
        +EQERTT KI EILVALNEARGEDPLED+GN+ A QGQLN+DGEDE LGELP
Subjt:  IEQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELP

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.7e-0780.49Show/hide
Query:  QLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVREST
        QLN+D EDE  GELPQEVHGDEFE+EEDNDDISQYEV+  T
Subjt:  QLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVREST

A0A6J1DW79 uncharacterized protein LOC1110249646.3e-2644.67Show/hide
Query:  MEGSSSFKPYDIEKEKKKVLLPPPTKP-----------------------------------GMIPLETSRISH-------EKLVFDPRDK---------
        MEGSS  KP D E EKKKV+LPPP  P                                     +    +RI+        E+ ++D +++         
Subjt:  MEGSSSFKPYDIEKEKKKVLLPPPTKP-----------------------------------GMIPLETSRISH-------EKLVFDPRDK---------

Query:  ----RRKYEEAIRMKARGNLSI-EQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVR
            +R  E + RM     + + EQERTTSKI +ILVALNEA GEDPLED+GNS   QG+LN+DGEDE LG+LPQEVHGDE EEEE+NDDISQYEVR
Subjt:  ----RRKYEEAIRMKARGNLSI-EQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGEDEVLGELPQEVHGDEFEEEEDNDDISQYEVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTCATCTTCCTTCAAGCCATATGACATAGAGAAGGAGAAGAAGAAAGTGTTGTTGCCTCCACCAACTAAACCGGGTATGATTCCTCTTGAAACTTCTAGGAT
TTCTCATGAAAAGCTAGTTTTTGATCCTAGAGACAAAAGAAGAAAATATGAGGAAGCTATAAGAATGAAAGCTAGGGGAAATCTATCCATAGAACAGGAAAGGACAACGT
CGAAAATTGTTGAAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAGGATCCATTGGAGGATAATGGAAATAGTGAGGCACCACAAGGACAATTGAATATTGATGGAGAG
GATGAAGTTCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAGGAAGACAATGATGATATCTCTCAATATGAAGTGAGAGAGAGTACGAACTCCGG
TGTAGGAATCTTAGCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTCATCTTCCTTCAAGCCATATGACATAGAGAAGGAGAAGAAGAAAGTGTTGTTGCCTCCACCAACTAAACCGGGTATGATTCCTCTTGAAACTTCTAGGAT
TTCTCATGAAAAGCTAGTTTTTGATCCTAGAGACAAAAGAAGAAAATATGAGGAAGCTATAAGAATGAAAGCTAGGGGAAATCTATCCATAGAACAGGAAAGGACAACGT
CGAAAATTGTTGAAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAGGATCCATTGGAGGATAATGGAAATAGTGAGGCACCACAAGGACAATTGAATATTGATGGAGAG
GATGAAGTTCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAAGAGGAGGAAGACAATGATGATATCTCTCAATATGAAGTGAGAGAGAGTACGAACTCCGG
TGTAGGAATCTTAGCAAGATGA
Protein sequenceShow/hide protein sequence
MEGSSSFKPYDIEKEKKKVLLPPPTKPGMIPLETSRISHEKLVFDPRDKRRKYEEAIRMKARGNLSIEQERTTSKIVEILVALNEARGEDPLEDNGNSEAPQGQLNIDGE
DEVLGELPQEVHGDEFEEEEDNDDISQYEVRESTNSGVGILAR