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Moc05g14220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr5:10810768..10812376
RNA-Seq ExpressionMoc05g14220
SyntenyMoc05g14220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]3.4e-2439.22Show/hide
Query:  SLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPAL--PSQQYN
        S V QI++I C YC DNH+YENC  NP S +Y                              QG SS + Q   QQYKQ + P  F +   +  P QQYN
Subjt:  SLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPAL--PSQQYN

Query:  QQRAQNTTRQGGNNARFEAVMKEFMTKSEA---TTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPS
        Q +   +     NN   E + KE+M +++A   + N  +      +RNLE+Q+ Q A D K+RPQG+  GHTE  KRD  G E CKA   R GLSYEGP 
Subjt:  QQRAQNTTRQGGNNARFEAVMKEFMTKSEA---TTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPS

Query:  LPTE
        +P E
Subjt:  LPTE

XP_022157836.1 uncharacterized protein LOC111024449 [Momordica charantia]2.7e-2136.08Show/hide
Query:  CVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQN------------------TTRQGGNNARFEAVMK
        C YCGD+H  ENC +NP  + Y  QG S+ + Q   QQYK  + P      P  P QQ+NQQ+  +                  T+       R +  M+
Subjt:  CVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQN------------------TTRQGGNNARFEAVMK

Query:  EFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPTEGTDAVTPVPASTSNP
        EF T+++    ++ +R D A+RNLE Q+ Q+A++ K+RP+GT    TE PK +  G+EHCK   TR GL+YE P +P EG+   T    + + P
Subjt:  EFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPTEGTDAVTPVPASTSNP

XP_022158314.1 uncharacterized protein LOC111024824 [Momordica charantia]8.1e-5064Show/hide
Query:  MLEPSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQ
        MLEPSL LQISDISCVYCGDN LYENC ANP S+FY                            SNQGV+S S Q PAQQYKQN+ PP FPT+PA   QQ
Subjt:  MLEPSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQ

Query:  YNQQRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPK
        YNQQRAQNTT+QGG+N   EA+ KEFMT+SEATT EFMTRTD  IR LE+QV QIA D+KSRPQGT  G+TENPK
Subjt:  YNQQRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPK

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]1.8e-2535.69Show/hide
Query:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQ--------------------------GVSSRSVQAPAQQYKQNHPPPGFPTEPALP--SQQYNQ
        PS V QI++ +C YCGD H  ENC +NP S++Y  Q                          G  S +     QQYK+ + PPGFP  PA P    QYNQ
Subjt:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQ--------------------------GVSSRSVQAPAQQYKQNHPPPGFPTEPALP--SQQYNQ

Query:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRT-----------------DVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKA
        Q+      Q  N +  E +MKE +TK++AT  E MTRT                 DV +R LE+Q+ Q+  + ++RPQG+    TE P+  R GKEHC +
Subjt:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRT-----------------DVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKA

Query:  AITRGGLSYEGPSLPTEGTDAVTPVPASTSNPQREDKAKLVIFNVLDTIRLPDEV
          TR GL YEGP +P E          S+ +P RE           DT  +PD++
Subjt:  AITRGGLSYEGPSLPTEGTDAVTPVPASTSNPQREDKAKLVIFNVLDTIRLPDEV

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]1.4e-2036.95Show/hide
Query:  LEPSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQNTTRQGGNNARFEAVMKEFMTK
        ++P+  +Q ++ISCVYCGD H +ENC +NP S+ Y    V + S  A   Q KQ+  PPGF  +P  P Q +          QG   +  E++M+++M K
Subjt:  LEPSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQNTTRQGGNNARFEAVMKEFMTK

Query:  SEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGL----------SYEGPSLPTEGTDAVTPVPASTSNPQ
        ++A     +     +++NLEIQ+ Q+A D K+RPQGT    TENP+RD  GKEHCKA   R G           S E  S+  EG     P  ++   P+
Subjt:  SEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGL----------SYEGPSLPTEGTDAVTPVPASTSNPQ

Query:  RED
          D
Subjt:  RED

TrEMBL top hitse value%identityAlignment
A0A6J1DAE9 uncharacterized protein LOC1110185141.7e-2439.22Show/hide
Query:  SLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPAL--PSQQYN
        S V QI++I C YC DNH+YENC  NP S +Y                              QG SS + Q   QQYKQ + P  F +   +  P QQYN
Subjt:  SLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPAL--PSQQYN

Query:  QQRAQNTTRQGGNNARFEAVMKEFMTKSEA---TTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPS
        Q +   +     NN   E + KE+M +++A   + N  +      +RNLE+Q+ Q A D K+RPQG+  GHTE  KRD  G E CKA   R GLSYEGP 
Subjt:  QQRAQNTTRQGGNNARFEAVMKEFMTKSEA---TTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPS

Query:  LPTE
        +P E
Subjt:  LPTE

A0A6J1DY39 uncharacterized protein LOC1110256538.8e-2635.69Show/hide
Query:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQ--------------------------GVSSRSVQAPAQQYKQNHPPPGFPTEPALP--SQQYNQ
        PS V QI++ +C YCGD H  ENC +NP S++Y  Q                          G  S +     QQYK+ + PPGFP  PA P    QYNQ
Subjt:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQ--------------------------GVSSRSVQAPAQQYKQNHPPPGFPTEPALP--SQQYNQ

Query:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRT-----------------DVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKA
        Q+      Q  N +  E +MKE +TK++AT  E MTRT                 DV +R LE+Q+ Q+  + ++RPQG+    TE P+  R GKEHC +
Subjt:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRT-----------------DVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKA

Query:  AITRGGLSYEGPSLPTEGTDAVTPVPASTSNPQREDKAKLVIFNVLDTIRLPDEV
          TR GL YEGP +P E          S+ +P RE           DT  +PD++
Subjt:  AITRGGLSYEGPSLPTEGTDAVTPVPASTSNPQREDKAKLVIFNVLDTIRLPDEV

A0A6J1DYG0 uncharacterized protein LOC1110257641.2e-1933.48Show/hide
Query:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQ
        P+ V Q++D+ C +C +NH+Y+ C  NP S+FY                              QG S    Q  +QQ KQ + PP     P  P Q+YN 
Subjt:  PSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQ

Query:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPT-
        QR Q    Q  NN+  E +MKE+M +++A     +     ++RN E Q+ Q+A + K+RPQG+   HTE PKR+  GKE CKA   R GL+Y+ P++PT 
Subjt:  QRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPT-

Query:  ----EGTDAVTPVPASTSNPQREDKAK
              T     +P + + P++ +  K
Subjt:  ----EGTDAVTPVPASTSNPQREDKAK

A0A6J1DZ19 uncharacterized protein LOC1110248243.9e-5064Show/hide
Query:  MLEPSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQ
        MLEPSL LQISDISCVYCGDN LYENC ANP S+FY                            SNQGV+S S Q PAQQYKQN+ PP FPT+PA   QQ
Subjt:  MLEPSLVLQISDISCVYCGDNHLYENCQANPVSIFY----------------------------SNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQ

Query:  YNQQRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPK
        YNQQRAQNTT+QGG+N   EA+ KEFMT+SEATT EFMTRTD  IR LE+QV QIA D+KSRPQGT  G+TENPK
Subjt:  YNQQRAQNTTRQGGNNARFEAVMKEFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPK

A0A6J1DZC3 uncharacterized protein LOC1110244491.3e-2136.08Show/hide
Query:  CVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQN------------------TTRQGGNNARFEAVMK
        C YCGD+H  ENC +NP  + Y  QG S+ + Q   QQYK  + P      P  P QQ+NQQ+  +                  T+       R +  M+
Subjt:  CVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQN------------------TTRQGGNNARFEAVMK

Query:  EFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPTEGTDAVTPVPASTSNP
        EF T+++    ++ +R D A+RNLE Q+ Q+A++ K+RP+GT    TE PK +  G+EHCK   TR GL+YE P +P EG+   T    + + P
Subjt:  EFMTKSEATTNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPTEGTDAVTPVPASTSNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGAACCCTCTCTTGTTTTACAAATTTCAGATATATCTTGTGTCTATTGTGGTGATAACCACTTGTATGAGAATTGTCAAGCTAATCCAGTGTCTATTTTC
TATAGTAACCAAGGAGTATCTAGTAGAAGTGTGCAAGCACCTGCTCAACAATACAAGCAAAACCACCCTCCTCCTGGTTTTCCTACTGAACCTGCGTTACCGTCG
CAACAATACAATCAACAACGAGCTCAAAATACTACTCGGCAAGGTGGTAACAACGCACGTTTTGAGGCCGTGATGAAAGAATTCATGACAAAAAGTGAAGCTACA
ACAAACGAGTTCATGACAAGAACTGATGTTGCGATAAGAAACTTGGAGATACAAGTGGAGCAGATAGCAACTGACCAAAAATCTAGACCACAAGGTACACCGTCT
GGACACACTGAGAATCCGAAGCGAGATCGTAAGGGAAAGGAGCACTGTAAGGCGGCTATCACGAGAGGCGGACTGAGTTATGAAGGACCCTCACTTCCAACTGAA
GGAACTGATGCAGTTACACCTGTTCCTGCATCCACCTCCAATCCACAAAGAGAAGACAAAGCAAAACTCGTAATCTTCAATGTCCTTGATACGATACGTCTCCCG
GATGAAGTGGAAGACTGCTCTGCAATAGGGGCAATAATGGAGGAACTCCAGGAAATGATTGTGGAAGACTTAGAAGCTGATTTAGAGGCCGCAGAAAAAGAAGCC
AAAATTGCACCTGCCGCAATTTTGCCCCAATTTGAGCGTTTTGAGTTTTTGCAGCCAACTATAGCGGATTTAAAGACCTTGCAACCTTCCATCATTGAACCTCCA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGAACCCTCTCTTGTTTTACAAATTTCAGATATATCTTGTGTCTATTGTGGTGATAACCACTTGTATGAGAATTGTCAAGCTAATCCAGTGTCTATTTTC
TATAGTAACCAAGGAGTATCTAGTAGAAGTGTGCAAGCACCTGCTCAACAATACAAGCAAAACCACCCTCCTCCTGGTTTTCCTACTGAACCTGCGTTACCGTCG
CAACAATACAATCAACAACGAGCTCAAAATACTACTCGGCAAGGTGGTAACAACGCACGTTTTGAGGCCGTGATGAAAGAATTCATGACAAAAAGTGAAGCTACA
ACAAACGAGTTCATGACAAGAACTGATGTTGCGATAAGAAACTTGGAGATACAAGTGGAGCAGATAGCAACTGACCAAAAATCTAGACCACAAGGTACACCGTCT
GGACACACTGAGAATCCGAAGCGAGATCGTAAGGGAAAGGAGCACTGTAAGGCGGCTATCACGAGAGGCGGACTGAGTTATGAAGGACCCTCACTTCCAACTGAA
GGAACTGATGCAGTTACACCTGTTCCTGCATCCACCTCCAATCCACAAAGAGAAGACAAAGCAAAACTCGTAATCTTCAATGTCCTTGATACGATACGTCTCCCG
GATGAAGTGGAAGACTGCTCTGCAATAGGGGCAATAATGGAGGAACTCCAGGAAATGATTGTGGAAGACTTAGAAGCTGATTTAGAGGCCGCAGAAAAAGAAGCC
AAAATTGCACCTGCCGCAATTTTGCCCCAATTTGAGCGTTTTGAGTTTTTGCAGCCAACTATAGCGGATTTAAAGACCTTGCAACCTTCCATCATTGAACCTCCA
TAA
Protein sequenceShow/hide protein sequence
MLEPSLVLQISDISCVYCGDNHLYENCQANPVSIFYSNQGVSSRSVQAPAQQYKQNHPPPGFPTEPALPSQQYNQQRAQNTTRQGGNNARFEAVMKEFMTKSEAT
TNEFMTRTDVAIRNLEIQVEQIATDQKSRPQGTPSGHTENPKRDRKGKEHCKAAITRGGLSYEGPSLPTEGTDAVTPVPASTSNPQREDKAKLVIFNVLDTIRLP
DEVEDCSAIGAIMEELQEMIVEDLEADLEAAEKEAKIAPAAILPQFERFEFLQPTIADLKTLQPSIIEPP