; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g14340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr5:10864284..10865243
RNA-Seq ExpressionMoc05g14340
SyntenyMoc05g14340
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018823930.2 uncharacterized protein LOC108993460 [Juglans regia]3.4e-2829.56Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        WN   ++  F   EA +I  I +   +  D+ +W   K   F+VKSAY+L  +    +   +S+       WN LWK KV  K KI  W+   +ILPT V
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTG------RDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGG
        NL K+ I    +CP+C  + ET  H+ W CK  + +W         S+   R+ ++        D    ++     E   +  F   +IW  RNK VF  
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTG------RDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGG

Query:  E-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA
        +  P QQIL L       +++I  + H+                     TS Q Q    W  PP+N++K+N D +      R GIG  IRDW+G V+++ 
Subjt:  E-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA

Query:  M--------PLLGNRKAS
                 PLLG   A+
Subjt:  M--------PLLGNRKAS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.1e-2627.94Show/hide
Query:  ENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKIC
        +  +A ++  +  W E  I  +F   +A  I+ IP+P+R  ED++IW  DKK ++SVKS Y +    +  E+ + SN+D  +  W  +WK  +  K KI 
Subjt:  ENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKIC

Query:  CWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIV-----IHSTQEVINKTIFMVWQ
         W+   D+LPT  NL+KK +  + +C  C  + ET  H   EC   + +W +       S   + L    R    W++      H+  E   +   ++W 
Subjt:  CWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIV-----IHSTQEVINKTIFMVWQ

Query:  IWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVI
        IW  RNK +F G+  N   +  + +  +                   S   IR       T   A+ ++ WSPP N W K+N DA+   +    G+G V+
Subjt:  IWTFRNKVVFGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVI

Query:  RDWVGEVSSSAMPLL
        RD  G   ++A+  L
Subjt:  RDWVGEVSSSAMPLL

XP_042939515.1 uncharacterized protein LOC122274552 [Carya illinoinensis]3.4e-2829.35Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        W ++ ++A F   EA  I +IPI  + ++D++IW   +K  F+VKSAY+ D   + +    +S+ D  +  W  LW+   + K KI  WK L  ILPT  
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCD----FGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGED
         LFK+ +  +  CP+C + EET  H+ W+C+    +W    DC     +G  FGD         W  +     +  ++    + + +W  RN +VF G+ 
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCD----FGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGED

Query:  PNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV
            +L   I + +   E  T  H++               P    T +   VR +W PP   + K+N DA+    + + GIG V+RD+ GEV
Subjt:  PNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV

XP_042954621.1 uncharacterized protein LOC122291036 [Carya illinoinensis]6.5e-2727.54Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        W    +++ F + EA LI +IPI RR   D  IWV   +  +++KSAY+++T    R     S    +   W  LW+ +V  K KI  WK L +ILPT  
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDC---------DFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVV
         L+KK I  ++LCP+C + +ET  H  W C     +W               DF  ++G+ + +  ++  +     ST           + IWT RN   
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDC---------DFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVV

Query:  FGGEDPN-QQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVR---EIWSPP-LNIWKMNSDASWFDDQNRGGIGWVIRDWVG
        F  +  N   I++L       ++EI     K+ NN                T ++++Q R   ++W PP    +K+N D ++  D+   G+G ++RD  G
Subjt:  FGGEDPN-QQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVR---EIWSPP-LNIWKMNSDASWFDDQNRGGIGWVIRDWVG

Query:  EVSSS
         + ++
Subjt:  EVSSS

XP_042958109.1 uncharacterized protein LOC122293655 [Carya illinoinensis]3.4e-2828.62Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        W ++ ++A F   EA  I +IPI  + ++D++IW   +K  F+VKSAY+ D   + +    +S+ D  +  W  LW+   + K KI  WK L  ILPT  
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDC----DFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGED
         LFK+ +  +  CP+C + EET  H+ W+C     +W    DC    ++G  FGD         W  +     +  ++    + + +W  RN +VF G+ 
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDC----DFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGED

Query:  PNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPP-LNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA
            +L   I + +   E  T  H++                +  T  ++  VR +W PP  +  K+N DA+    + + GIG V+RD+ GE+   A
Subjt:  PNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPP-LNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA

TrEMBL top hitse value%identityAlignment
A0A2I4EWZ9 uncharacterized protein LOC1089934601.7e-2829.56Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        WN   ++  F   EA +I  I +   +  D+ +W   K   F+VKSAY+L  +    +   +S+       WN LWK KV  K KI  W+   +ILPT V
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTG------RDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGG
        NL K+ I    +CP+C  + ET  H+ W CK  + +W         S+   R+ ++        D    ++     E   +  F   +IW  RNK VF  
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTG------RDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGG

Query:  E-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA
        +  P QQIL L       +++I  + H+                     TS Q Q    W  PP+N++K+N D +      R GIG  IRDW+G V+++ 
Subjt:  E-DPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIW-SPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSA

Query:  M--------PLLGNRKAS
                 PLLG   A+
Subjt:  M--------PLLGNRKAS

A0A5C7I8M1 zf-RVT domain-containing protein7.7e-2633.02Show/hide
Query:  MASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWK
        ++ +M  +G W+++ +R+ F+  E+ +I++IP+     ED  +W  DKK  FSVKSAY +  ADQ+ ++A+ S   L    W  LW  ++  K +  CWK
Subjt:  MASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWK

Query:  LLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKP---LWNFFVDCD--FGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWT
            ILPT + L KKG+    LCP C    E+  H  W CK   P    W+ F D +   G  F DR++        W+     ++V+   +   W +W 
Subjt:  LLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKP---LWNFFVDCD--FGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWT

Query:  FRNKVVFGGEDP
         RN++V GG  P
Subjt:  FRNKVVFGGEDP

A0A6P9EAZ3 uncharacterized protein LOC1183479871.6e-2628.43Show/hide
Query:  KENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKI
        KE  +  +M  RG WN   IR  F   EA+ I +IPI   +VED ++W P KK  FSV+SAY+L+   +      +S ++ + + W+ +W+  V  K K+
Subjt:  KENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKI

Query:  CCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRD---YWDWIVIHSTQEVINKTIFMVWQI
          WK   D L T  NLF K I  + LCP+C+  EET  H+ W+C     +W+        S    ++ +   D    W+ + +  ++  + +   ++  +
Subjt:  CCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRD---YWDWIVIHSTQEVINKTIFMVWQI

Query:  WTFRNKVVFGG--EDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVI
        W  RN+ +F    + P+Q I     D + + Q +  +     NN    S  +      P T S++A               N DA+    Q R G+G +I
Subjt:  WTFRNKVVFGG--EDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVI

Query:  RDWVGE
        RD  G+
Subjt:  RDWVGE

A0A6P9ERU8 uncharacterized protein LOC1183486342.7e-2628.1Show/hide
Query:  KENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKI
        KE  +  +M  RG WN   IR  F   EA+ I +IP+   +VED ++W P KK  FSV+SAY+L+   +      +S ++ + + W+ +W+  V  K K+
Subjt:  KENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKI

Query:  CCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRD---YWDWIVIHSTQEVINKTIFMVWQI
          WK   D L T  NLF K I  + LCP+C+  EET  H+ W+C     +W+        S    ++ +   D    W+ + +  ++  + +   ++  +
Subjt:  CCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRD---YWDWIVIHSTQEVINKTIFMVWQI

Query:  WTFRNKVVFGG--EDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVI
        W  RN+ +F    + P+Q I     D + + Q +  +     NN    S  +      P T S++A               N DA+    Q R G+G +I
Subjt:  WTFRNKVVFGG--EDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVI

Query:  RDWVGE
        RD  G+
Subjt:  RDWVGE

A0A803QG02 Uncharacterized protein4.5e-2627.15Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV
        W+   +R +F   + + I+++ I     ED +IW       ++VKS Y+L  A Q+ +   SS +DL    WN LW  K+  K KI  W+++ D LPT V
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDILPTNV

Query:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLM---QTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGEDP
        NL  + I     C LC    E++ H  + C   + +W+         VF    +     G + +  I      +V+ K + ++W IWT RNK + G +  
Subjt:  NLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLM---QTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGEDP

Query:  NQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGE-VSSSAMPL
           ++   +D  +    ++       ++ C+N +    ++P  A      Q   +W+ PP   +K+N D ++ D+ +  GIG V+RD+ G+ V + + PL
Subjt:  NQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWS-PPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGE-VSSSAMPL

Query:  LG
        +G
Subjt:  LG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.7e-0528.99Show/hide
Query:  WNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFF
        +  +W     PK    CW +  + L T   L   G+    +C LC  ++E+  HL +EC     +W FF
Subjt:  WNCLWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFF

AT3G09510.1 Ribonuclease H-like superfamily protein3.4e-1826.16Show/hide
Query:  FWNEQTIRANFID-SEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMRE----EATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTD
        FW++  I + F+D S+   I  I + +    D++IW  +    ++V+S Y+L T D             + DL+ R WN      + PK K   W+ L+ 
Subjt:  FWNEQTIRANFID-SEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMRE----EATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTD

Query:  ILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWI------VIHSTQEVINK--TIFMVWQIWTF
         L T   L  +G+R D  CP C +  E+  H  + C      W         S+  ++LM    D+ + I      V  +T    +K   ++++W+IW  
Subjt:  ILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWI------VIHSTQEVINK--TIFMVWQIWTF

Query:  RNKVVFG--GEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVIRDW
        RN VVF    E P++ +L+     + H    +T +HK+              +P P T  I     E  +PP    K N DA +   +     GW+IR+ 
Subjt:  RNKVVFG--GEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVIRDW

Query:  VG
         G
Subjt:  VG

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.3e-0533.93Show/hide
Query:  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWEC
        +W  K++PK K+  WK L + LP    L  + I  +  C  CR + ET  H+ + C
Subjt:  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWEC

AT4G29090.1 Ribonuclease H-like superfamily protein8.2e-2024.6Show/hide
Query:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYY-----LDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDI
        W +  I   F + E  LI  +    R + D   W       ++VKS Y+     ++     +E +  S N + ++    +WKS+ +PK +   WK L++ 
Subjt:  WNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYY-----LDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDI

Query:  LPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNF-FVDCDFGSVFGDRLMQTGRDYWDWIVIHST---QEVINKTIFMVWQIWTFRNKVV
        LP    L  + +  +  C  C   +ET  HL ++C   +  W    +    G  + D +      YW + + +     ++      +++W++W  RN++V
Subjt:  LPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNF-FVDCDFGSVFGDRLMQTGRDYWDWIVIHST---QEVINKTIFMVWQIWTFRNKVV

Query:  FGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV--
        F G + N Q +    +  +    I T     +   C     + R S               W PP + W K N+DA+W  D  R GIGWV+R+  GEV  
Subjt:  FGGEDPNQQILALHIDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIW-KMNSDASWFDDQNRGGIGWVIRDWVGEV--

Query:  -SSSAMPLL
          + A+P L
Subjt:  -SSSAMPLL

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.3e-0524.14Show/hide
Query:  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGS-VFGDRLMQTGRDYWDWIVIHSTQEVI
        +W  +  P+  +  W    + LPT   L   G+       LC   +ET  HL +EC  +  +W FF      S  FG   +     +   + + S    I
Subjt:  LWKSKVTPKAKICCWKLLTDILPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGS-VFGDRLMQTGRDYWDWIVIHSTQEVI

Query:  NKTIFM--VWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEIS
         K +    V+ +W  RN  +F     +   L L ID+ +  + +S
Subjt:  NKTIFM--VWQIWTFRNKVVFGGEDPNQQILALHIDKQIHIQEIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAAACAATATGGCTTCAATCATGATATTTAGAGGGTTTTGGAACGAACAAACGATTCGAGCCAATTTCATAGACTCCGAAGCTAATCTTATTATCAATATTCC
TATTCCAAGGAGGGACGTGGAAGACGAAGTTATTTGGGTTCCAGATAAAAAAGACTTTTTCTCTGTAAAAAGTGCCTACTATTTAGACACTGCTGACCAAATGAGAGAAG
AGGCAACCTCCTCTAACAATGACTTACAGAGGCGCACTTGGAATTGTTTATGGAAATCTAAAGTCACCCCAAAAGCAAAGATTTGTTGCTGGAAACTCTTGACTGATATT
TTACCTACAAATGTTAATTTGTTTAAAAAAGGTATTCGCCCTGACTTTTTGTGTCCTCTGTGCAGGAAATATGAAGAGACGGCCAAGCACCTTTGTTGGGAGTGTAAGGT
TACGAAACCTTTATGGAATTTTTTTGTGGATTGTGATTTTGGCTCTGTTTTTGGTGACAGGTTGATGCAAACAGGCAGAGATTATTGGGACTGGATTGTGATTCATTCTA
CACAAGAAGTGATTAACAAAACAATTTTCATGGTGTGGCAAATATGGACTTTTCGAAACAAGGTGGTGTTTGGAGGCGAGGATCCCAACCAGCAAATTTTGGCACTTCAC
ATTGACAAGCAAATCCATATCCAGGAAATTTCTACTCATAATCACAAAAGGGACAACAACTTGTGCTCAAATTCTAATTGCATGATAAGGCATAGCCCGGACCCAGCAAC
AACGTCAATTCAAGCACAAGTTCGTGAAATCTGGTCCCCCCCTTTAAATATCTGGAAAATGAACTCTGATGCATCCTGGTTTGACGACCAAAATCGGGGTGGGATTGGAT
GGGTGATTCGAGATTGGGTTGGAGAAGTGTCCTCGTCGGCAATGCCTCTGTTAGGGAACAGAAAAGCATCAAGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAAACAATATGGCTTCAATCATGATATTTAGAGGGTTTTGGAACGAACAAACGATTCGAGCCAATTTCATAGACTCCGAAGCTAATCTTATTATCAATATTCC
TATTCCAAGGAGGGACGTGGAAGACGAAGTTATTTGGGTTCCAGATAAAAAAGACTTTTTCTCTGTAAAAAGTGCCTACTATTTAGACACTGCTGACCAAATGAGAGAAG
AGGCAACCTCCTCTAACAATGACTTACAGAGGCGCACTTGGAATTGTTTATGGAAATCTAAAGTCACCCCAAAAGCAAAGATTTGTTGCTGGAAACTCTTGACTGATATT
TTACCTACAAATGTTAATTTGTTTAAAAAAGGTATTCGCCCTGACTTTTTGTGTCCTCTGTGCAGGAAATATGAAGAGACGGCCAAGCACCTTTGTTGGGAGTGTAAGGT
TACGAAACCTTTATGGAATTTTTTTGTGGATTGTGATTTTGGCTCTGTTTTTGGTGACAGGTTGATGCAAACAGGCAGAGATTATTGGGACTGGATTGTGATTCATTCTA
CACAAGAAGTGATTAACAAAACAATTTTCATGGTGTGGCAAATATGGACTTTTCGAAACAAGGTGGTGTTTGGAGGCGAGGATCCCAACCAGCAAATTTTGGCACTTCAC
ATTGACAAGCAAATCCATATCCAGGAAATTTCTACTCATAATCACAAAAGGGACAACAACTTGTGCTCAAATTCTAATTGCATGATAAGGCATAGCCCGGACCCAGCAAC
AACGTCAATTCAAGCACAAGTTCGTGAAATCTGGTCCCCCCCTTTAAATATCTGGAAAATGAACTCTGATGCATCCTGGTTTGACGACCAAAATCGGGGTGGGATTGGAT
GGGTGATTCGAGATTGGGTTGGAGAAGTGTCCTCGTCGGCAATGCCTCTGTTAGGGAACAGAAAAGCATCAAGTTCTTAG
Protein sequenceShow/hide protein sequence
MKENNMASIMIFRGFWNEQTIRANFIDSEANLIINIPIPRRDVEDEVIWVPDKKDFFSVKSAYYLDTADQMREEATSSNNDLQRRTWNCLWKSKVTPKAKICCWKLLTDI
LPTNVNLFKKGIRPDFLCPLCRKYEETAKHLCWECKVTKPLWNFFVDCDFGSVFGDRLMQTGRDYWDWIVIHSTQEVINKTIFMVWQIWTFRNKVVFGGEDPNQQILALH
IDKQIHIQEISTHNHKRDNNLCSNSNCMIRHSPDPATTSIQAQVREIWSPPLNIWKMNSDASWFDDQNRGGIGWVIRDWVGEVSSSAMPLLGNRKASSS