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Moc05g14450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:10927496..10927888
RNA-Seq ExpressionMoc05g14450
SyntenyMoc05g14450
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]1.4e-3375.25Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        M F SEA+VPVE+GM  ER+DYYE  RNEEELLL+LDL+DEKRE AQL L EYQNR+ RH+NS V+P+SFQV HLVLRKV KHV  LEPSWEG FEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  V
        V
Subjt:  V

XP_022156049.1 uncharacterized protein LOC111023017 [Momordica charantia]1.8e-3153.91Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        + F SEA++PVE+GM   RV+ ++   N E  LL+LDL++EKR  +QL LAEYQNRMAR++N+R + ++F+   L L+KV++HVEALEP+WEGP+ V  +
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHPWNAEHLKRY
        VRP  Y+L+DL G+ L HPWNAE L+ Y
Subjt:  VRPGTYMLADLEGKLLLHPWNAEHLKRY

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]2.1e-4581.51Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        M F+SEAVV VE+GM  ERV+YYE+ RNEEELLL LDLIDEKREAAQL LAEYQN+MARH+NSRV+ +SFQ+ +LVLRKV KHVE LEPSWEGPFEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHP
        VRPGTYMLADLEGKLL HP
Subjt:  VRPGTYMLADLEGKLLLHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]6.5e-3457.03Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        + F SEAVVP EVGM   RV+ +++  N E LL++LDL++EKR  +QL LAEYQNRMAR++N+RV+ ++F+   LVL+KV++HV ALEP+WEGP+ V  I
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHPWNAEHLKRY
        +RP  Y+L+DL G+ L HPWNAEHL+ Y
Subjt:  VRPGTYMLADLEGKLLLHPWNAEHLKRY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.8e-4266.92Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        + F SEA+VP E+GM  +R++ YE  RNE ELLL+LDL++ KRE AQL L E QNRMARH+N+R+QP+SFQV HLV  K+  HV  L+PSWE  FEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHPWNAEHLKRYCP
        VRPGTYMLADLE  +L HPWNAEHLKRY P
Subjt:  VRPGTYMLADLEGKLLLHPWNAEHLKRYCP

TrEMBL top hitse value%identityAlignment
A0A2N9EW70 Ribonuclease H6.5e-3253.33Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVE-----ALEPSWEGPF
        MTF SEAVVPVE+G+   R   Y++ +NEE+L L+LDLIDE RE A+  +  YQ +MARHHNS+V+P+   +  LVLRKV    +      L P+WEGP+
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVE-----ALEPSWEGPF

Query:  EVKGIVRPGTYMLADLEGKLLLHPWNAEHLKRYCP
        +V  I RPGTY L D+ G+ L HPWNAEHL++Y P
Subjt:  EVKGIVRPGTYMLADLEGKLLLHPWNAEHLKRYCP

A0A6J1CLW5 protein NYNRIN-like7.0e-3475.25Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        M F SEA+VPVE+GM  ER+DYYE  RNEEELLL+LDL+DEKRE AQL L EYQNR+ RH+NS V+P+SFQV HLVLRKV KHV  LEPSWEG FEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  V
        V
Subjt:  V

A0A6J1DP99 uncharacterized protein K02A2.6-like1.0e-4581.51Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        M F+SEAVV VE+GM  ERV+YYE+ RNEEELLL LDLIDEKREAAQL LAEYQN+MARH+NSRV+ +SFQ+ +LVLRKV KHVE LEPSWEGPFEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHP
        VRPGTYMLADLEGKLL HP
Subjt:  VRPGTYMLADLEGKLLLHP

A0A6J1DWM2 Ribonuclease H3.1e-3457.03Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        + F SEAVVP EVGM   RV+ +++  N E LL++LDL++EKR  +QL LAEYQNRMAR++N+RV+ ++F+   LVL+KV++HV ALEP+WEGP+ V  I
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHPWNAEHLKRY
        +RP  Y+L+DL G+ L HPWNAEHL+ Y
Subjt:  VRPGTYMLADLEGKLLLHPWNAEHLKRY

A0A6J1DXL9 uncharacterized protein LOC1110254481.8e-4266.92Show/hide
Query:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI
        + F SEA+VP E+GM  +R++ YE  RNE ELLL+LDL++ KRE AQL L E QNRMARH+N+R+QP+SFQV HLV  K+  HV  L+PSWE  FEVKGI
Subjt:  MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGI

Query:  VRPGTYMLADLEGKLLLHPWNAEHLKRYCP
        VRPGTYMLADLE  +L HPWNAEHLKRY P
Subjt:  VRPGTYMLADLEGKLLLHPWNAEHLKRYCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCGCGTCCGAGGCCGTAGTGCCTGTAGAAGTTGGGATGCTAAAGGAGAGAGTAGACTACTATGAGCAGGCTAGGAATGAGGAAGAGTTACTCCTCAGCCTCGA
CCTCATCGATGAGAAAAGGGAAGCGGCCCAGCTGGGTTTGGCTGAATACCAAAATCGAATGGCAAGGCACCACAACTCGAGGGTCCAGCCTCAGAGCTTCCAGGTCAGAC
ACCTAGTCCTTCGCAAGGTGTTGAAGCATGTTGAGGCGTTGGAACCAAGTTGGGAGGGGCCATTTGAAGTCAAGGGCATAGTCCGACCTGGGACGTATATGCTTGCCGAT
CTCGAAGGAAAGTTACTCTTGCACCCATGGAATGCAGAGCATTTGAAGAGATATTGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCGCGTCCGAGGCCGTAGTGCCTGTAGAAGTTGGGATGCTAAAGGAGAGAGTAGACTACTATGAGCAGGCTAGGAATGAGGAAGAGTTACTCCTCAGCCTCGA
CCTCATCGATGAGAAAAGGGAAGCGGCCCAGCTGGGTTTGGCTGAATACCAAAATCGAATGGCAAGGCACCACAACTCGAGGGTCCAGCCTCAGAGCTTCCAGGTCAGAC
ACCTAGTCCTTCGCAAGGTGTTGAAGCATGTTGAGGCGTTGGAACCAAGTTGGGAGGGGCCATTTGAAGTCAAGGGCATAGTCCGACCTGGGACGTATATGCTTGCCGAT
CTCGAAGGAAAGTTACTCTTGCACCCATGGAATGCAGAGCATTTGAAGAGATATTGCCCTTGA
Protein sequenceShow/hide protein sequence
MTFASEAVVPVEVGMLKERVDYYEQARNEEELLLSLDLIDEKREAAQLGLAEYQNRMARHHNSRVQPQSFQVRHLVLRKVLKHVEALEPSWEGPFEVKGIVRPGTYMLAD
LEGKLLLHPWNAEHLKRYCP