; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g14560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionphotosynthetic NDH subunit of subcomplex B 2, chloroplastic
Genome locationchr5:11003762..11005328
RNA-Seq ExpressionMoc05g14560
SyntenyMoc05g14560
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0005975 - carbohydrate metabolic process (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0007095 - mitotic G2 DNA damage checkpoint (biological process)
GO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0097552 - mitochondrial double-strand break repair via homologous recombination (biological process)
GO:0042138 - meiotic DNA double-strand break formation (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0030870 - Mre11 complex (cellular component)
GO:0030246 - carbohydrate binding (molecular function)
GO:0030145 - manganese ion binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
GO:0000014 - single-stranded DNA endodeoxyribonuclease activity (molecular function)
InterPro domainsIPR014718 - Glycoside hydrolase-type carbohydrate-binding
IPR011013 - Galactose mutarotase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465324.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucumis melo]5.9e-16784.9Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGP
        +SL+C PL  PKP++IRASSSS S S  ++ +SLN KF RKG HFHDS G+PT+DLTVRNGSSLRLHISDAHLTSY PKVYWK DGFE++LFTTPTA   
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGP

Query:  RGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGL
        +GGIAL+I+DASD    SSLLPSSDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSES+ATAVIVKNTG KPLTLKSAILSHFKFK+RDGAAIQGL
Subjt:  RGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGL

Query:  QGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF
        QGCSYC+HPPLSSPFEILSPSEAMK ++P+WFSFGSEPQ KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF
Subjt:  QGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF

Query:  EDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        EDIYVSSPGS SNK+GKD+FICTGPASMLVPVT+KPGE+W+GAQVIEHDNL
Subjt:  EDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

XP_011652321.1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucumis sativus]2.7e-16785.51Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSS--TSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANG
        +SL+C PL  PKP++IRASSSS S +S  ++V+SLN KFGRKG HFHDS G+PT+DLTVRNGSSLRL ISDAHLTSY PKVYWK DGFE+VLFTTPTA  
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSS--TSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANG

Query:  PRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQG
         +GGIAL+I+DASD    SSLLPSSDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSES+ATAVIVKNTG KPLTLKSAILSHFKFKRRDGAAIQG
Subjt:  PRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQG

Query:  LQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG
        LQGCSYC+HPPLSSPFEILSPSEAMK ++ +WFSFGSEPQ KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG
Subjt:  LQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG

Query:  FEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        FEDIYVSSPGS SNK+GKD+FICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  FEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

XP_022155883.1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic, partial [Momordica charantia]3.5e-16799.66Show/hide
Query:  VDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT
        V+LTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT
Subjt:  VDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT

Query:  LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN
        LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN
Subjt:  LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN

Query:  KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
Subjt:  KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

XP_022932774.1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucurbita moschata]1.0e-16683.99Show/hide
Query:  SSLLCFPLPRPKPSIIRA---SSSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTP
        +SL+C PL  PK SI+RA   SSSSLSPS+TS    +SLN KFGRKGIHFH S G+PTVDLTVRNGSSLRLHISDAH+ SY PKVYWK DGFE+VLFTTP
Subjt:  SSLLCFPLPRPKPSIIRA---SSSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTP

Query:  TANGPRGGIALIINDASDS----SLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGA
         ANG +GGI L+INDAS+S    SLLP+SDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSESMATAVIVKNTGPK L+L SAILSHFKFKRRDGA
Subjt:  TANGPRGGIALIINDASDS----SLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGA

Query:  AIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRV
        AIQGL+GCSYC+ PPLSSPFEILSP+EAMKA+DP+WFSFGSEPQEKAGSWSLQDVPFT+LKNKFSRVYAAPPAER KP+YHTTPSKYETLDQGRELFFRV
Subjt:  AIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRV

Query:  IRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        IRMGFEDIYV SPGS S+K+GKDYFICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  IRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

XP_038905339.1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Benincasa hispida]3.5e-16785.71Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR
        +SL+C PL  PKP+IIRASSSS +  ST+ + LN KFGRKGIHFHDS G+P +DLTVRNGSSLRLHISDAHLTSY PKVYWK DGFE+VLFTTPTA   +
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR

Query:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ
        GGIAL+I+DASD    SSLLP SDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSESMATAVIVKNTG KPLTLKSAILSHFKFKRRDGAAIQGLQ
Subjt:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ

Query:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE
        GCSYC+HPPLSSPFE+LSPSEAMKA++P+WFSFGSEPQ KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKP+YHTTPSKYETLDQGRELFFRVIRMGFE
Subjt:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE

Query:  DIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        DIY++SPGS SNK+GKDYFICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  DIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

TrEMBL top hitse value%identityAlignment
A0A0A0LCL5 Uncharacterized protein1.3e-16785.51Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSS--TSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANG
        +SL+C PL  PKP++IRASSSS S +S  ++V+SLN KFGRKG HFHDS G+PT+DLTVRNGSSLRL ISDAHLTSY PKVYWK DGFE+VLFTTPTA  
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSS--TSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANG

Query:  PRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQG
         +GGIAL+I+DASD    SSLLPSSDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSES+ATAVIVKNTG KPLTLKSAILSHFKFKRRDGAAIQG
Subjt:  PRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQG

Query:  LQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG
        LQGCSYC+HPPLSSPFEILSPSEAMK ++ +WFSFGSEPQ KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG
Subjt:  LQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMG

Query:  FEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        FEDIYVSSPGS SNK+GKD+FICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  FEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

A0A1S3CQ42 photosynthetic NDH subunit of subcomplex B 2, chloroplastic2.9e-16784.9Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGP
        +SL+C PL  PKP++IRASSSS S S  ++ +SLN KF RKG HFHDS G+PT+DLTVRNGSSLRLHISDAHLTSY PKVYWK DGFE++LFTTPTA   
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGP

Query:  RGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGL
        +GGIAL+I+DASD    SSLLPSSDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSES+ATAVIVKNTG KPLTLKSAILSHFKFK+RDGAAIQGL
Subjt:  RGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGL

Query:  QGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF
        QGCSYC+HPPLSSPFEILSPSEAMK ++P+WFSFGSEPQ KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF
Subjt:  QGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGF

Query:  EDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        EDIYVSSPGS SNK+GKD+FICTGPASMLVPVT+KPGE+W+GAQVIEHDNL
Subjt:  EDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

A0A6J1DP41 photosynthetic NDH subunit of subcomplex B 2, chloroplastic1.7e-16799.66Show/hide
Query:  VDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT
        V+LTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT
Subjt:  VDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVT

Query:  LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN
        LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN
Subjt:  LYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKN

Query:  KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
Subjt:  KFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

A0A6J1EXZ1 photosynthetic NDH subunit of subcomplex B 2, chloroplastic4.9e-16783.99Show/hide
Query:  SSLLCFPLPRPKPSIIRA---SSSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTP
        +SL+C PL  PK SI+RA   SSSSLSPS+TS    +SLN KFGRKGIHFH S G+PTVDLTVRNGSSLRLHISDAH+ SY PKVYWK DGFE+VLFTTP
Subjt:  SSLLCFPLPRPKPSIIRA---SSSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTP

Query:  TANGPRGGIALIINDASDS----SLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGA
         ANG +GGI L+INDAS+S    SLLP+SDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSESMATAVIVKNTGPK L+L SAILSHFKFKRRDGA
Subjt:  TANGPRGGIALIINDASDS----SLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGA

Query:  AIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRV
        AIQGL+GCSYC+ PPLSSPFEILSP+EAMKA+DP+WFSFGSEPQEKAGSWSLQDVPFT+LKNKFSRVYAAPPAER KP+YHTTPSKYETLDQGRELFFRV
Subjt:  AIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRV

Query:  IRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        IRMGFEDIYV SPGS S+K+GKDYFICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  IRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

A0A6J1I4B2 photosynthetic NDH subunit of subcomplex B 2, chloroplastic4.9e-16783.29Show/hide
Query:  SSLLCFPLPRPKPSIIRAS------SSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF
        +SL+C PL  PK SI+RAS      SSSLSPS+TS    +SLN KFGRKGIHFH S G+PTVDLTVRNGSSLRLHISDAH+TSY PKVYWK DGFE+VLF
Subjt:  SSLLCFPLPRPKPSIIRAS------SSSLSPSSTS---VESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF

Query:  TTPTANGPRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRR
        TTP ANG +GGI L+INDAS+    SSLLP+SDWT+KDVDSDAIDALQVELS SSKQMEITY+VTLYSESMATAVIVKNTGPK L+L SAILSHFKFKRR
Subjt:  TTPTANGPRGGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRR

Query:  DGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELF
        DGAAIQGL+GCSYC+ PPLSSPFEILSP+EAMKA+DP+WFSFGSEPQEKAGSWSLQDVPFT+LKNKFSRVYAAPPAER KP+YHTTPSKYETLDQGRELF
Subjt:  DGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELF

Query:  FRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        FRVIRMGFEDIY+ SPGS S+K+GKDYFICTGPASMLVPVT+KPGE+WRGAQVIEHDNL
Subjt:  FRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

SwissProt top hitse value%identityAlignment
Q40784 Putative glucose-6-phosphate 1-epimerase2.5e-0634.21Show/hide
Query:  IYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDY-------FICTGPASMLVPVTIKPGEEWRG
        +Y   PSK   +D  ++  F V + G  D  V +P     K  +D+        +C  PA++  P+T+KPGEEWRG
Subjt:  IYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDY-------FICTGPASMLVPVTIKPGEEWRG

Q94AQ8 Photosynthetic NDH subunit of subcomplex B 2, chloroplastic3.5e-11458.12Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR
        +SL+ F L  PKP  +R+S S+    + + E L  KFGRKGI F +S  +P V+L VRNGSSL+L +SDAH+ SY PKVYWK +GFE+VL+T    +  R
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR

Query:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ
        GG+ ++I +  +    SS++   DW++KD DSDAIDALQ+ELS ++  ++ITY+V+LY  SMATA++VKN G KP+TLK  I+S+ +FK+R GA IQGL+
Subjt:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ

Query:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE
        GCSYC +PPLSSPFE+LSPSEAMKA+   W  FGSE  EK G W+++D   T+L+ K SR+Y APPAERLK +Y+T PSK+ET+DQGR LFFR+IR+GFE
Subjt:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE

Query:  DIYVSSPGSSSNKYGKD-YFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        ++YV SPGS  +KYGK  YF+CTGP SMLVPV +  GE WRGA VIEHDNL
Subjt:  DIYVSSPGSSSNKYGKD-YFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

Q9C503 Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 52.3e-2826.52Show/hide
Query:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF
        ++SS    PL       R + S+  ++S+S SP+    VE L  +F   G  F D G      L + NGSS  + ++   +TSY  +V+  H G  ++L 
Subjt:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF

Query:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK
        T           RGG++     +SDS  +  SDW L+ +  D+ D +Q+EL RS    K++E+  +++L   +++  + + N G  P+ L+  +++S+  
Subjt:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK

Query:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQG
            +     GL+G  +    P    F ++                G + +EK G    ++  +  L  + SR+Y               P  +  +D+G
Subjt:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQG

Query:  RELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDN
        R     V R GFE++Y+ SPGS    Y K  ++C GP+S+L P++++ G  WRG   + + N
Subjt:  RELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDN

Arabidopsis top hitse value%identityAlignment
AT1G55370.1 NDH-dependent cyclic electron flow 55.6e-1425.09Show/hide
Query:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF
        ++SS    PL       R + S+  ++S+S SP+    VE L  +F   G  F D G      L + NGSS  + ++   +TSY  +V+  H G  ++L 
Subjt:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF

Query:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK
        T           RGG++     +SDS  +  SDW L+ +  D+ D +Q+EL RS    K++E+  +++L   +++  + + N G  P+ L+  +++S+  
Subjt:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK

Query:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPP
            +     GL+G  +    P    F ++                G + +EK G    ++  +  L  + SR+Y   P
Subjt:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPP

AT1G55370.2 NDH-dependent cyclic electron flow 51.6e-2926.52Show/hide
Query:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF
        ++SS    PL       R + S+  ++S+S SP+    VE L  +F   G  F D G      L + NGSS  + ++   +TSY  +V+  H G  ++L 
Subjt:  MASSLLCFPL------PRPKPSIIRASSSSLSPS-STSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLF

Query:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK
        T           RGG++     +SDS  +  SDW L+ +  D+ D +Q+EL RS    K++E+  +++L   +++  + + N G  P+ L+  +++S+  
Subjt:  TTPTANGP----RGGIALIINDASDSSLLPSSDWTLKDVDSDAIDALQVELSRSS---KQMEITYVVTLYSESMATAVIVKNTGPKPLTLKS-AILSHFK

Query:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQG
            +     GL+G  +    P    F ++                G + +EK G    ++  +  L  + SR+Y               P  +  +D+G
Subjt:  FKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQG

Query:  RELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDN
        R     V R GFE++Y+ SPGS    Y K  ++C GP+S+L P++++ G  WRG   + + N
Subjt:  RELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVTIKPGEEWRGAQVIEHDN

AT1G64770.1 NDH-dependent cyclic electron flow 12.5e-11558.12Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR
        +SL+ F L  PKP  +R+S S+    + + E L  KFGRKGI F +S  +P V+L VRNGSSL+L +SDAH+ SY PKVYWK +GFE+VL+T    +  R
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR

Query:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ
        GG+ ++I +  +    SS++   DW++KD DSDAIDALQ+ELS ++  ++ITY+V+LY  SMATA++VKN G KP+TLK  I+S+ +FK+R GA IQGL+
Subjt:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ

Query:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE
        GCSYC +PPLSSPFE+LSPSEAMKA+   W  FGSE  EK G W+++D   T+L+ K SR+Y APPAERLK +Y+T PSK+ET+DQGR LFFR+IR+GFE
Subjt:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFE

Query:  DIYVSSPGSSSNKYGKD-YFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL
        ++YV SPGS  +KYGK  YF+CTGP SMLVPV +  GE WRGA VIEHDNL
Subjt:  DIYVSSPGSSSNKYGKD-YFICTGPASMLVPVTIKPGEEWRGAQVIEHDNL

AT1G64770.2 NDH-dependent cyclic electron flow 11.2e-8555.24Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR
        +SL+ F L  PKP  +R+S S+    + + E L  KFGRKGI F +S  +P V+L VRNGSSL+L +SDAH+ SY PKVYWK +GFE+VL+T    +  R
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR

Query:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ
        GG+ ++I +  +    SS++   DW++KD DSDAIDALQ+ELS ++  ++ITY+V+LY  SMATA++VKN G KP+TLK  I+S+ +FK+R GA IQGL+
Subjt:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ

Query:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQ
        GCSYC +PPLSSPFE+LSPSEAMKA+   W  FGSE  EK G W+++D   T+L+ K SR+Y APPAERLK +Y+T PSK+ET+DQ
Subjt:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQ

AT1G64770.3 NDH-dependent cyclic electron flow 17.1e-8654.67Show/hide
Query:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR
        +SL+ F L  PKP  +R+S S+    + + E L  KFGRKGI F +S  +P V+L VRNGSSL+L +SDAH+ SY PKVYWK +GFE+VL+T    +  R
Subjt:  SSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPR

Query:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ
        GG+ ++I +  +    SS++   DW++KD DSDAIDALQ+ELS ++  ++ITY+V+LY  SMATA++VKN G KP+TLK  I+S+ +FK+R GA IQGL+
Subjt:  GGIALIINDASD----SSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQ

Query:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRE
        GCSYC +PPLSSPFE+LSPSEAMKA+   W  FGSE  EK G W+++D   T+L+ K SR+Y APPAERLK +Y+T PSK+ET+DQ ++
Subjt:  GCSYCAHPPLSSPFEILSPSEAMKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTCTCCTTTGCTTTCCACTCCCCAGACCCAAACCAAGCATCATTAGGGCTTCTTCTTCTTCGCTCTCTCCTTCTTCAACCTCCGTCGAGTCTCTGAACCA
CAAATTTGGCCGCAAGGGCATCCACTTCCACGACTCCGGTGGCCTTCCCACCGTCGACCTCACCGTCCGCAACGGCAGCTCCCTCCGCCTCCACATCTCCGACGCCCATC
TCACATCCTACACACCCAAAGTCTACTGGAAGCACGACGGCTTCGAGCAAGTTCTCTTCACCACTCCCACCGCCAATGGCCCTAGAGGAGGCATCGCTCTTATAATCAAT
GACGCCTCCGATTCCTCCCTTCTCCCCTCCTCTGATTGGACTCTTAAGGATGTCGATTCCGACGCCATTGATGCTCTGCAGGTGGAGTTAAGCCGCAGTAGCAAGCAAAT
GGAGATTACTTATGTTGTCACTCTCTATTCAGAAAGTATGGCGACCGCCGTGATCGTGAAGAACACGGGACCTAAGCCGTTGACGCTAAAGAGCGCAATTCTAAGTCATT
TCAAGTTCAAAAGACGAGATGGAGCAGCCATCCAGGGGCTTCAAGGTTGCTCTTACTGCGCTCACCCGCCTCTATCTTCCCCTTTCGAAATATTGTCTCCATCGGAAGCA
ATGAAGGCCGACGACCCCGAGTGGTTCTCGTTTGGCTCTGAGCCTCAGGAAAAAGCAGGCTCATGGAGCCTCCAAGATGTGCCCTTCACCATGTTGAAGAACAAGTTCAG
CAGAGTTTATGCCGCCCCACCGGCTGAGAGACTGAAGCCCATATATCATACCACACCTTCAAAGTATGAGACTCTTGATCAGGGGCGAGAGCTGTTCTTCAGGGTGATAA
GGATGGGGTTCGAAGACATATACGTATCAAGCCCAGGTTCATCATCCAACAAGTATGGCAAAGACTACTTCATATGCACTGGCCCTGCTTCCATGTTGGTTCCTGTGACT
ATAAAACCTGGTGAAGAGTGGAGGGGCGCCCAAGTGATCGAGCATGATAACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTCTCCTTTGCTTTCCACTCCCCAGACCCAAACCAAGCATCATTAGGGCTTCTTCTTCTTCGCTCTCTCCTTCTTCAACCTCCGTCGAGTCTCTGAACCA
CAAATTTGGCCGCAAGGGCATCCACTTCCACGACTCCGGTGGCCTTCCCACCGTCGACCTCACCGTCCGCAACGGCAGCTCCCTCCGCCTCCACATCTCCGACGCCCATC
TCACATCCTACACACCCAAAGTCTACTGGAAGCACGACGGCTTCGAGCAAGTTCTCTTCACCACTCCCACCGCCAATGGCCCTAGAGGAGGCATCGCTCTTATAATCAAT
GACGCCTCCGATTCCTCCCTTCTCCCCTCCTCTGATTGGACTCTTAAGGATGTCGATTCCGACGCCATTGATGCTCTGCAGGTGGAGTTAAGCCGCAGTAGCAAGCAAAT
GGAGATTACTTATGTTGTCACTCTCTATTCAGAAAGTATGGCGACCGCCGTGATCGTGAAGAACACGGGACCTAAGCCGTTGACGCTAAAGAGCGCAATTCTAAGTCATT
TCAAGTTCAAAAGACGAGATGGAGCAGCCATCCAGGGGCTTCAAGGTTGCTCTTACTGCGCTCACCCGCCTCTATCTTCCCCTTTCGAAATATTGTCTCCATCGGAAGCA
ATGAAGGCCGACGACCCCGAGTGGTTCTCGTTTGGCTCTGAGCCTCAGGAAAAAGCAGGCTCATGGAGCCTCCAAGATGTGCCCTTCACCATGTTGAAGAACAAGTTCAG
CAGAGTTTATGCCGCCCCACCGGCTGAGAGACTGAAGCCCATATATCATACCACACCTTCAAAGTATGAGACTCTTGATCAGGGGCGAGAGCTGTTCTTCAGGGTGATAA
GGATGGGGTTCGAAGACATATACGTATCAAGCCCAGGTTCATCATCCAACAAGTATGGCAAAGACTACTTCATATGCACTGGCCCTGCTTCCATGTTGGTTCCTGTGACT
ATAAAACCTGGTGAAGAGTGGAGGGGCGCCCAAGTGATCGAGCATGATAACTTGTAA
Protein sequenceShow/hide protein sequence
MASSLLCFPLPRPKPSIIRASSSSLSPSSTSVESLNHKFGRKGIHFHDSGGLPTVDLTVRNGSSLRLHISDAHLTSYTPKVYWKHDGFEQVLFTTPTANGPRGGIALIIN
DASDSSLLPSSDWTLKDVDSDAIDALQVELSRSSKQMEITYVVTLYSESMATAVIVKNTGPKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCAHPPLSSPFEILSPSEA
MKADDPEWFSFGSEPQEKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQGRELFFRVIRMGFEDIYVSSPGSSSNKYGKDYFICTGPASMLVPVT
IKPGEEWRGAQVIEHDNL