; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g14860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiondouble-stranded RNA-binding protein 4-like isoform X1
Genome locationchr5:11211521..11215038
RNA-Seq ExpressionMoc05g14860
SyntenyMoc05g14860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143454.1 double-stranded RNA-binding protein 4-like isoform X1 [Momordica charantia]4.8e-1042.54Show/hide
Query:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-
        GA+ DAARIALEYIS+RTK DGFLLL            E+ VK  ++  +Y +N    +    ++T  L F   ++ G  S   KEAEQ AARAAIL L 
Subjt:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-

Query:  --TENPDTHETIHTVITYKVRLHATWKQISSICP
            NP++ +T+  +I  KVRLHAT +++    P
Subjt:  --TENPDTHETIHTVITYKVRLHATWKQISSICP

XP_022143455.1 double-stranded RNA-binding protein 4-like isoform X2 [Momordica charantia]3.1e-0944.8Show/hide
Query:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-
        GA+ DAARIALEYIS+RTK DGFLLL            E+ VK  ++  +Y +N    +    ++T  L F   ++ G  S   KEAEQ AARAAIL L 
Subjt:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-

Query:  --TENPDTHETIHTVITYKVRLHAT
            NP++ +T+  +I  KVRLHAT
Subjt:  --TENPDTHETIHTVITYKVRLHAT

XP_022155958.1 uncharacterized protein LOC111022951 isoform X1 [Momordica charantia]8.8e-89100Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

XP_022155966.1 uncharacterized protein LOC111022951 isoform X2 [Momordica charantia]7.7e-8597.58Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHRE    DFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

XP_022155967.1 uncharacterized protein LOC111022951 isoform X3 [Momordica charantia]3.4e-7287.27Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHRE                     NKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

TrEMBL top hitse value%identityAlignment
A0A6J1CNV0 double-stranded RNA-binding protein 4-like isoform X21.5e-0944.8Show/hide
Query:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-
        GA+ DAARIALEYIS+RTK DGFLLL            E+ VK  ++  +Y +N    +    ++T  L F   ++ G  S   KEAEQ AARAAIL L 
Subjt:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-

Query:  --TENPDTHETIHTVITYKVRLHAT
            NP++ +T+  +I  KVRLHAT
Subjt:  --TENPDTHETIHTVITYKVRLHAT

A0A6J1CPC5 double-stranded RNA-binding protein 4-like isoform X12.3e-1042.54Show/hide
Query:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-
        GA+ DAARIALEYIS+RTK DGFLLL            E+ VK  ++  +Y +N    +    ++T  L F   ++ G  S   KEAEQ AARAAIL L 
Subjt:  GADQDAARIALEYISQRTKHDGFLLLHR----------EFLVKDFVR--IYESNEVGVTCLQNKATHGLNFILPIHVGCWS---KEAEQSAARAAILPL-

Query:  --TENPDTHETIHTVITYKVRLHATWKQISSICP
            NP++ +T+  +I  KVRLHAT +++    P
Subjt:  --TENPDTHETIHTVITYKVRLHATWKQISSICP

A0A6J1DPA6 uncharacterized protein LOC111022951 isoform X14.3e-89100Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

A0A6J1DQT1 uncharacterized protein LOC111022951 isoform X31.6e-7287.27Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHRE                     NKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

A0A6J1DTB1 uncharacterized protein LOC111022951 isoform X23.7e-8597.58Show/hide
Query:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
        GGADQDAARIALEYISQRTKHDGFLLLHRE    DFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT
Subjt:  GGADQDAARIALEYISQRTKHDGFLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVIT

Query:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
        YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN
Subjt:  YKVRLHATWKQISSICPFMRLSRLLIYNYFLFRELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGGGCTCAGCGTTACCTCATCCGAGAGGTCGGTCGCTTAATTCAGGCTCGTCACTGGTTCTCCCCTGTCAAGGGTGGTCGGATTAAGTCGATGACCAGGGCTCG
GCCTTGCCTCACCCGAGAGGTCTGTCGCTTCATTCAGGCCCGACGCTGGTTCTCCCCTGTCAAGGGTGTTCGGATTAAGGTGATGATCAGGGCTCTGTCTTACCTCACCC
GAGTGATCGGCCGTTTCACTCTACACGCCTCGGATCAGAATTTCGCTCGGATCGGGATTTCGTTTCAACGAAGCTTGCTTCACTCCGTGAAGATGATTCCAGAACCTTCT
AGACAAACCCTAATTCGGCTTTGCAGTGCCCGAGGAATCGTAGATCGTAGGCGGGATATTCATGGGCTGGGCCATGGGCCTAGCAGGGGTCGGGACCGAGAAGTGGTCGA
GACCGAGCAGGGTCGGGACCGAGCCCTCTCGACCCGGTTAGTTCTCCGCCAGTCGCTTTCCTCGTTCTCTGCCCCGACGTTAGGTGGTGTACGTAAAGATCCTGTTATCC
AGAATAAGGAAACAAAGACAGACCAACTATGGAAGCCTACAGGGGGAGCTGATCAGGATGCTGCAAGAATTGCCCTTGAGTACATATCACAAAGAACAAAGCACGATGGC
TTTCTTCTTCTTCATCGGGAGTTCCTTGTGAAGGATTTTGTTCGAATATACGAATCAAATGAAGTTGGAGTTACCTGTTTACAGAACAAAGCAACACATGGCCTCAATTT
CATTTTGCCAATCCACGTTGGTTGTTGGAGTAAGGAGGCAGAGCAATCGGCAGCACGTGCTGCTATTCTCCCACTTACTGAAAATCCTGATACACATGAAACTATACATA
CAGTAATCACTTATAAAGTCAGACTCCATGCAACGTGGAAACAGATCTCTTCAATTTGCCCATTCATGAGACTCTCAAGACTCTTAATCTACAATTACTTTCTATTTAGA
GAACTAGCTAGTAAAGAGGTCTGCAGTTTAGCCGTAGGCATTGAGGGGACCTATTTGCTTGTCTATTGTATGAATCCATTTGTTTTATTGGTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGGGCTCAGCGTTACCTCATCCGAGAGGTCGGTCGCTTAATTCAGGCTCGTCACTGGTTCTCCCCTGTCAAGGGTGGTCGGATTAAGTCGATGACCAGGGCTCG
GCCTTGCCTCACCCGAGAGGTCTGTCGCTTCATTCAGGCCCGACGCTGGTTCTCCCCTGTCAAGGGTGTTCGGATTAAGGTGATGATCAGGGCTCTGTCTTACCTCACCC
GAGTGATCGGCCGTTTCACTCTACACGCCTCGGATCAGAATTTCGCTCGGATCGGGATTTCGTTTCAACGAAGCTTGCTTCACTCCGTGAAGATGATTCCAGAACCTTCT
AGACAAACCCTAATTCGGCTTTGCAGTGCCCGAGGAATCGTAGATCGTAGGCGGGATATTCATGGGCTGGGCCATGGGCCTAGCAGGGGTCGGGACCGAGAAGTGGTCGA
GACCGAGCAGGGTCGGGACCGAGCCCTCTCGACCCGGTTAGTTCTCCGCCAGTCGCTTTCCTCGTTCTCTGCCCCGACGTTAGGTGGTGTACGTAAAGATCCTGTTATCC
AGAATAAGGAAACAAAGACAGACCAACTATGGAAGCCTACAGGGGGAGCTGATCAGGATGCTGCAAGAATTGCCCTTGAGTACATATCACAAAGAACAAAGCACGATGGC
TTTCTTCTTCTTCATCGGGAGTTCCTTGTGAAGGATTTTGTTCGAATATACGAATCAAATGAAGTTGGAGTTACCTGTTTACAGAACAAAGCAACACATGGCCTCAATTT
CATTTTGCCAATCCACGTTGGTTGTTGGAGTAAGGAGGCAGAGCAATCGGCAGCACGTGCTGCTATTCTCCCACTTACTGAAAATCCTGATACACATGAAACTATACATA
CAGTAATCACTTATAAAGTCAGACTCCATGCAACGTGGAAACAGATCTCTTCAATTTGCCCATTCATGAGACTCTCAAGACTCTTAATCTACAATTACTTTCTATTTAGA
GAACTAGCTAGTAAAGAGGTCTGCAGTTTAGCCGTAGGCATTGAGGGGACCTATTTGCTTGTCTATTGTATGAATCCATTTGTTTTATTGGTGAATTAA
Protein sequenceShow/hide protein sequence
MTRAQRYLIREVGRLIQARHWFSPVKGGRIKSMTRARPCLTREVCRFIQARRWFSPVKGVRIKVMIRALSYLTRVIGRFTLHASDQNFARIGISFQRSLLHSVKMIPEPS
RQTLIRLCSARGIVDRRRDIHGLGHGPSRGRDREVVETEQGRDRALSTRLVLRQSLSSFSAPTLGGVRKDPVIQNKETKTDQLWKPTGGADQDAARIALEYISQRTKHDG
FLLLHREFLVKDFVRIYESNEVGVTCLQNKATHGLNFILPIHVGCWSKEAEQSAARAAILPLTENPDTHETIHTVITYKVRLHATWKQISSICPFMRLSRLLIYNYFLFR
ELASKEVCSLAVGIEGTYLLVYCMNPFVLLVN