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Moc05g14880 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g14880
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:11223891..11224962
RNA-Seq ExpressionMoc05g14880
SyntenyMoc05g14880
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]7.3e-1162.34Show/hide
Query:  EEGDSEAEYGNDANDYALDEDH--DVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT
        EEGD EAE+ ND  D ALDE+   DV+QV+  I RDE AV+Q  C+GL+GQ N E LQL+VQS  TNDVKE +VFDT
Subjt:  EEGDSEAEYGNDANDYALDEDH--DVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT

XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]4.3e-2761.9Show/hide
Query:  NTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEG
        ++C P  C     PQFQ+PT    SFPSSSSN SSS+  HP Y H+GHDIA LTPL+SD VVPCNL D+RVCDW+     NDN+DESDESY PLG++EEG
Subjt:  NTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEG

Query:  DSEAEYGNDANDYALDEDH--DVQQV
        D EAE+ ND  D ALDE+   DV+QV
Subjt:  DSEAEYGNDANDYALDEDH--DVQQV

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]6.1e-4260.11Show/hide
Query:  LNHDWSGTANTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESY
        L  D    +++C P  C     P FQ+PT    SFPSSSSN SSS+  H  YGH+GHDIA LTPL+SD VVPCNL D+RVC W+     NDN+DESDESY
Subjt:  LNHDWSGTANTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESY

Query:  FPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT
          LGK+EEGD EAE+ ND  D A DE  + DV+QV   I RDE  V Q  C+GL GQPNDEKLQL+VQS  TNDVKE KVFDT
Subjt:  FPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]2.5e-2764.04Show/hide
Query:  HVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQ
        +VVPCNL D+RVCDWD     NDNEDES ESY PL +++EG S+AEYGN+ +D ALD+  + DV+QV+  I RDEEAVR   CNGL+G PNDEKLQL+VQ
Subjt:  HVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQ

Query:  SFRTNDVKESKVFD
        S  TNDV E  VFD
Subjt:  SFRTNDVKESKVFD

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]4.4e-3265.35Show/hide
Query:  GHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLS
        GHD+  LTPL SD VVPCNL D+RVCDWD     NDNEDES ESY PL  +EEG S+AEYGN+ +D ALD+  + DV+QV+  I RDEEAVR   CNGL+
Subjt:  GHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLS

Query:  GQPNDEKLQLMVQSFRTNDVKESKVFD
        G PNDEKLQL+VQS  TNDV E  VFD
Subjt:  GQPNDEKLQLMVQSFRTNDVKESKVFD

TrEMBL top hitse value%identityAlignment
A0A6J1DJT1 uncharacterized protein LOC1110207153.5e-1162.34Show/hide
Query:  EEGDSEAEYGNDANDYALDEDH--DVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT
        EEGD EAE+ ND  D ALDE+   DV+QV+  I RDE AV+Q  C+GL+GQ N E LQL+VQS  TNDVKE +VFDT
Subjt:  EEGDSEAEYGNDANDYALDEDH--DVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT

A0A6J1DN26 uncharacterized protein LOC1110220902.1e-2761.9Show/hide
Query:  NTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEG
        ++C P  C     PQFQ+PT    SFPSSSSN SSS+  HP Y H+GHDIA LTPL+SD VVPCNL D+RVCDW+     NDN+DESDESY PLG++EEG
Subjt:  NTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEG

Query:  DSEAEYGNDANDYALDEDH--DVQQV
        D EAE+ ND  D ALDE+   DV+QV
Subjt:  DSEAEYGNDANDYALDEDH--DVQQV

A0A6J1DP00 uncharacterized protein LOC1110229543.0e-4260.11Show/hide
Query:  LNHDWSGTANTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESY
        L  D    +++C P  C     P FQ+PT    SFPSSSSN SSS+  H  YGH+GHDIA LTPL+SD VVPCNL D+RVC W+     NDN+DESDESY
Subjt:  LNHDWSGTANTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESY

Query:  FPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT
          LGK+EEGD EAE+ ND  D A DE  + DV+QV   I RDE  V Q  C+GL GQPNDEKLQL+VQS  TNDVKE KVFDT
Subjt:  FPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT

A0A6J1DQB9 Reverse transcriptase1.2e-2764.04Show/hide
Query:  HVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQ
        +VVPCNL D+RVCDWD     NDNEDES ESY PL +++EG S+AEYGN+ +D ALD+  + DV+QV+  I RDEEAVR   CNGL+G PNDEKLQL+VQ
Subjt:  HVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQ

Query:  SFRTNDVKESKVFD
        S  TNDV E  VFD
Subjt:  SFRTNDVKESKVFD

A0A6J1DTG5 uncharacterized protein LOC1110238432.1e-3265.35Show/hide
Query:  GHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLS
        GHD+  LTPL SD VVPCNL D+RVCDWD     NDNEDES ESY PL  +EEG S+AEYGN+ +D ALD+  + DV+QV+  I RDEEAVR   CNGL+
Subjt:  GHDIASLTPLDSDHVVPCNLRDERVCDWDAS---NDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDE--DHDVQQVNNGISRDEEAVRQTVCNGLS

Query:  GQPNDEKLQLMVQSFRTNDVKESKVFD
        G PNDEKLQL+VQS  TNDV E  VFD
Subjt:  GQPNDEKLQLMVQSFRTNDVKESKVFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAAGCTTGGTGCAATTTGCTTCGGGACAAGATTCGGGACATATCCCAGACTGATCTCGAACCAAGATTGGTCTGAGACATGTCTCGGACTAATCCTGAACCATGA
TTGGTCCGGGACAGCCAACACGTGTCATCCATTCCTGTGCCCACAACTTGTATCCCCCCAATTCCAAAAACCCACATATCGTAGACACTCATTTCCTTCCTCATCATCGA
ACCTCTCTTCTTCTGAACCCTCACATCCCTCCTACGGACATATAGGTCATGATATAGCATCTTTAACACCATTGGATTCAGATCATGTTGTTCCATGTAATCTGAGGGAT
GAAAGGGTATGTGATTGGGATGCGTCGAATGATAATGAAGATGAAAGTGATGAATCATATTTCCCGTTGGGAAAGACTGAAGAAGGAGACTCTGAAGCAGAATATGGGAA
TGATGCCAATGACTATGCACTTGATGAAGACCATGATGTGCAACAGGTAAACAATGGGATTAGTAGGGATGAAGAAGCGGTCCGACAAACAGTATGTAATGGTCTCTCCG
GACAACCTAATGATGAGAAATTGCAACTCATGGTACAGTCTTTTAGGACAAATGATGTTAAGGAGAGCAAAGTATTTGATACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACAAGCTTGGTGCAATTTGCTTCGGGACAAGATTCGGGACATATCCCAGACTGATCTCGAACCAAGATTGGTCTGAGACATGTCTCGGACTAATCCTGAACCATGA
TTGGTCCGGGACAGCCAACACGTGTCATCCATTCCTGTGCCCACAACTTGTATCCCCCCAATTCCAAAAACCCACATATCGTAGACACTCATTTCCTTCCTCATCATCGA
ACCTCTCTTCTTCTGAACCCTCACATCCCTCCTACGGACATATAGGTCATGATATAGCATCTTTAACACCATTGGATTCAGATCATGTTGTTCCATGTAATCTGAGGGAT
GAAAGGGTATGTGATTGGGATGCGTCGAATGATAATGAAGATGAAAGTGATGAATCATATTTCCCGTTGGGAAAGACTGAAGAAGGAGACTCTGAAGCAGAATATGGGAA
TGATGCCAATGACTATGCACTTGATGAAGACCATGATGTGCAACAGGTAAACAATGGGATTAGTAGGGATGAAGAAGCGGTCCGACAAACAGTATGTAATGGTCTCTCCG
GACAACCTAATGATGAGAAATTGCAACTCATGGTACAGTCTTTTAGGACAAATGATGTTAAGGAGAGCAAAGTATTTGATACGTAG
Protein sequenceShow/hide protein sequence
MYKLGAICFGTRFGTYPRLISNQDWSETCLGLILNHDWSGTANTCHPFLCPQLVSPQFQKPTYRRHSFPSSSSNLSSSEPSHPSYGHIGHDIASLTPLDSDHVVPCNLRD
ERVCDWDASNDNEDESDESYFPLGKTEEGDSEAEYGNDANDYALDEDHDVQQVNNGISRDEEAVRQTVCNGLSGQPNDEKLQLMVQSFRTNDVKESKVFDT