; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g15070 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15070
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Genome locationchr5:11322463..11323170
RNA-Seq ExpressionMoc05g15070
SyntenyMoc05g15070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151321.1 uncharacterized protein LOC111019284 [Momordica charantia]4.0e-1142.42Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTT
        +AFD  + IS N  QWSKSR ASA TSK L +DDVV DLNSKIS L +I+M +I+  +   SKA +Q                                 
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTT

Query:  VQSLVASLGNIEVQLGQLATELKS-PRGVLPS
             ASL N+EV++G+LATELKS PR +L S
Subjt:  VQSLVASLGNIEVQLGQLATELKS-PRGVLPS

XP_022155867.1 uncharacterized protein LOC111022881 [Momordica charantia]6.5e-1479.03Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRAS
        +AFDILERI  N  QWSKSRAAS  TSKGLVE+DVV DLNSKISKLA+IVM SISHS+ RAS
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRAS

XP_022158598.1 uncharacterized protein LOC111025053 [Momordica charantia]6.1e-1238.32Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQ----------------QAAPKHPKAMTLKDMF-
        KA +ILERIS +N  WS  RA    +SK LVE +    LNSKI  L ++   + S+SNT   + +N                   AP   + ++    F 
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQ----------------QAAPKHPKAMTLKDMF-

Query:  -KAYMVNN--------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSDTE
         +  MV +              + YMA ND TVQS  ASL N+E+Q+GQLA +LKS P G LPSDTE
Subjt:  -KAYMVNN--------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSDTE

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]1.9e-2953.05Show/hide
Query:  MKHYYQSSMLKAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAK-------------------------
        +KHY      +AFDILE ISRN  Q SKSRA S+ TSKGL  DDVV +LNSKISKLA+I M SISHS+  ASKAK                         
Subjt:  MKHYYQSSMLKAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAK-------------------------

Query:  ---------------NQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTTVQSLVASLGNIEVQ
                       NQQAAPKHP+ MTL+DMFKAYM  NE YM KNDTT+QSL ASLGNI+++
Subjt:  ---------------NQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTTVQSLVASLGNIEVQ

XP_022159060.1 uncharacterized protein LOC111025500 [Momordica charantia]1.0e-1135.2Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNN----------
        +AF+ILERIS NN+ WS  RA     SKG  E +    LN KI  L ++VM S++H +T  + A   +A   H + ++       Y  NN          
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNN----------

Query:  ------------------------------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSD
                                              YM  NDTTVQS   SL N+E+Q+GQLAT+LKS P+GVLPSD
Subjt:  ------------------------------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSD

TrEMBL top hitse value%identityAlignment
A0A6J1DEA2 uncharacterized protein LOC1110192841.9e-1142.42Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTT
        +AFD  + IS N  QWSKSR ASA TSK L +DDVV DLNSKIS L +I+M +I+  +   SKA +Q                                 
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTT

Query:  VQSLVASLGNIEVQLGQLATELKS-PRGVLPS
             ASL N+EV++G+LATELKS PR +L S
Subjt:  VQSLVASLGNIEVQLGQLATELKS-PRGVLPS

A0A6J1DQJ0 uncharacterized protein LOC1110228813.2e-1479.03Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRAS
        +AFDILERI  N  QWSKSRAAS  TSKGLVE+DVV DLNSKISKLA+IVM SISHS+ RAS
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRAS

A0A6J1DWK1 uncharacterized protein LOC1110250533.0e-1238.32Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQ----------------QAAPKHPKAMTLKDMF-
        KA +ILERIS +N  WS  RA    +SK LVE +    LNSKI  L ++   + S+SNT   + +N                   AP   + ++    F 
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQ----------------QAAPKHPKAMTLKDMF-

Query:  -KAYMVNN--------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSDTE
         +  MV +              + YMA ND TVQS  ASL N+E+Q+GQLA +LKS P G LPSDTE
Subjt:  -KAYMVNN--------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSDTE

A0A6J1DX14 uncharacterized protein LOC1110252349.2e-3053.05Show/hide
Query:  MKHYYQSSMLKAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAK-------------------------
        +KHY      +AFDILE ISRN  Q SKSRA S+ TSKGL  DDVV +LNSKISKLA+I M SISHS+  ASKAK                         
Subjt:  MKHYYQSSMLKAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAK-------------------------

Query:  ---------------NQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTTVQSLVASLGNIEVQ
                       NQQAAPKHP+ MTL+DMFKAYM  NE YM KNDTT+QSL ASLGNI+++
Subjt:  ---------------NQQAAPKHPKAMTLKDMFKAYMVNNEAYMAKNDTTVQSLVASLGNIEVQ

A0A6J1DXK5 uncharacterized protein LOC1110255005.0e-1235.2Show/hide
Query:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNN----------
        +AF+ILERIS NN+ WS  RA     SKG  E +    LN KI  L ++VM S++H +T  + A   +A   H + ++       Y  NN          
Subjt:  KAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNN----------

Query:  ------------------------------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSD
                                              YM  NDTTVQS   SL N+E+Q+GQLAT+LKS P+GVLPSD
Subjt:  ------------------------------------EAYMAKNDTTVQSLVASLGNIEVQLGQLATELKS-PRGVLPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCGAATGAAGCATTATTATCAAAGCAGTATGTTGAAAGCCTTTGATATTTTGGAAAGAATCTCACGCAATAATCGCCAATGGTCAAAATCAAGGGCC
GCTTCAGCAAATACATCTAAGGGATTAGTAGAGGATGATGTTGTGGTAGATTTAAATTCAAAAATTTCAAAGCTAGCAAACATTGTGATGATGAGCATATCGCAC
TCAAATACTAGAGCATCCAAGGCTAAGAATCAACAGGCCGCTCCGAAACATCCTAAGGCTATGACCCTGAAGGATATGTTTAAAGCATATATGGTAAATAACGAG
GCTTATATGGCGAAGAATGATACTACTGTTCAAAGTCTAGTTGCATCCTTGGGAAATATAGAGGTGCAATTAGGTCAGCTAGCCACAGAATTGAAAAGTCCACGA
GGAGTGCTTCCTAGTGACACTGAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCGAATGAAGCATTATTATCAAAGCAGTATGTTGAAAGCCTTTGATATTTTGGAAAGAATCTCACGCAATAATCGCCAATGGTCAAAATCAAGGGCC
GCTTCAGCAAATACATCTAAGGGATTAGTAGAGGATGATGTTGTGGTAGATTTAAATTCAAAAATTTCAAAGCTAGCAAACATTGTGATGATGAGCATATCGCAC
TCAAATACTAGAGCATCCAAGGCTAAGAATCAACAGGCCGCTCCGAAACATCCTAAGGCTATGACCCTGAAGGATATGTTTAAAGCATATATGGTAAATAACGAG
GCTTATATGGCGAAGAATGATACTACTGTTCAAAGTCTAGTTGCATCCTTGGGAAATATAGAGGTGCAATTAGGTCAGCTAGCCACAGAATTGAAAAGTCCACGA
GGAGTGCTTCCTAGTGACACTGAACAATAA
Protein sequenceShow/hide protein sequence
MLQRMKHYYQSSMLKAFDILERISRNNRQWSKSRAASANTSKGLVEDDVVVDLNSKISKLANIVMMSISHSNTRASKAKNQQAAPKHPKAMTLKDMFKAYMVNNE
AYMAKNDTTVQSLVASLGNIEVQLGQLATELKSPRGVLPSDTEQ