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Moc05g15210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 48 kDa protein
Genome locationchr5:11479810..11489416
RNA-Seq ExpressionMoc05g15210
SyntenyMoc05g15210
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1221166.1 Adenylyl-sulfate kinase 3 [Morella rubra]7.7e-0687.1Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSS
        MVLNSPLV WVAN+SADLCQY+ACNPER SS
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSS

KAE8098376.1 hypothetical protein FH972_016445 [Carpinus fangiana]3.5e-0678.79Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MV+NSP+V WVAN+SADLCQY+ACNPER SS H
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

KAG6581681.1 hypothetical protein SDJN03_21683, partial [Cucurbita argyrosperma subsp. sororia]7.0e-0787.88Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MVLNSP+V+WVANISADLCQYVACNPER SS H
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

XP_022151686.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Momordica charantia]4.4e-1774.65Show/hide
Query:  LFSLSSEVPFFTLLHGNHSGLAGRTTLDKVVVMALRVRELIDYLEIIGITTRYRILGSNESSLALVVSDYY
        L   SS++    LL GNHSGLAGRTT DKVV +ALRVRELIDYLEIIGITT+ RILGS+ SSLALV SDYY
Subjt:  LFSLSSEVPFFTLLHGNHSGLAGRTTLDKVVVMALRVRELIDYLEIIGITTRYRILGSNESSLALVVSDYY

XP_022974223.1 uncharacterized protein LOC111472845 [Cucurbita maxima]1.2e-0684.85Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MVLNSP+V+WVAN+SADLCQYVACNPER SS H
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

TrEMBL top hitse value%identityAlignment
A0A0A0LCL0 Uncharacterized protein1.6e-0996.97Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MVLNSPLVLWVANISADLCQY+ACNPERFSSHH
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

A0A5N6RJA5 Adenylyl-sulfate kinase1.7e-0678.79Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MV+NSP+V WVAN+SADLCQY+ACNPER SS H
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

A0A6A1WA25 Adenylyl-sulfate kinase3.7e-0687.1Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSS
        MVLNSPLV WVAN+SADLCQY+ACNPER SS
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSS

A0A6J1DFF2 U11/U12 small nuclear ribonucleoprotein 48 kDa protein2.1e-1774.65Show/hide
Query:  LFSLSSEVPFFTLLHGNHSGLAGRTTLDKVVVMALRVRELIDYLEIIGITTRYRILGSNESSLALVVSDYY
        L   SS++    LL GNHSGLAGRTT DKVV +ALRVRELIDYLEIIGITT+ RILGS+ SSLALV SDYY
Subjt:  LFSLSSEVPFFTLLHGNHSGLAGRTTLDKVVVMALRVRELIDYLEIIGITTRYRILGSNESSLALVVSDYY

A0A6J1IFL3 uncharacterized protein LOC1114728455.8e-0784.85Show/hide
Query:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH
        MVLNSP+V+WVAN+SADLCQYVACNPER SS H
Subjt:  MVLNSPLVLWVANISADLCQYVACNPERFSSHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTGAACAGTCCTCTCGTTTTGTGGGTCGCCAATATTTCTGCCGATCTCTGCCAATACGTCGCCTGTAATCCCGAGCGTTTCAGCAGCCACCATGATTGGCTGGA
TGTTGTCTCCTTCCTATCTTCCTTTGGCTTCGACCTCGACTTGGATCAGGTTCGATTTAACCAAATGATGAAATGCAATGGACCTGGCTTTAACAACAGGCTTCGACCTC
GACTTGGATCAGGCTTCGACCTCGACTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCAACGGACCTGGCTTTAACAACAGGCTTCGACCTCGACTTGGATCGGGC
TTCGACCTCGACTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCGACGGACCTGGCTTTAACAACAGGCTTCGACCTCGACTTGGATCGGGGTCTCTGACAGGATT
CCTGATAAGGCCTCAATGGCCATTTAAGGTAAGCTTGAATCACGACATGCTATCGTGGAGTTTGTCGGAATATGAGGCTAAGCGAGACACATCTAGAAATGTTTTTGTGG
TCTACTTTGAAGGTAAAGATCTTTTTAGCCTTAGCTCTGAAGTGCCGTTCTTCACGCTCCTGCATGGTAATCACAGCGGACTTGCGGGTCGTACCACTTTGGATAAGGTG
GTCGTAATGGCTCTACGGGTACGGGAGCTAATAGATTACCTTGAAATAATTGGGATAACAACTCGGTATAGGATATTGGGATCGAATGAAAGCTCTCTCGCTTTAGTTGT
CTCCGACTACTATGTGACAAATGTTTGTGGATCATCTTGCAGAGTCAATGAGTTTATGGGTACCGTAGAAGGACTGTATGCCACGAATCCTTGTTGGTACTTCCCCTTGC
GCTTCGAAACTACTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTGAACAGTCCTCTCGTTTTGTGGGTCGCCAATATTTCTGCCGATCTCTGCCAATACGTCGCCTGTAATCCCGAGCGTTTCAGCAGCCACCATGATTGGCTGGA
TGTTGTCTCCTTCCTATCTTCCTTTGGCTTCGACCTCGACTTGGATCAGGTTCGATTTAACCAAATGATGAAATGCAATGGACCTGGCTTTAACAACAGGCTTCGACCTC
GACTTGGATCAGGCTTCGACCTCGACTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCAACGGACCTGGCTTTAACAACAGGCTTCGACCTCGACTTGGATCGGGC
TTCGACCTCGACTTGGATCGGGTTCGATTTAACCGAATGATAAAATGCGACGGACCTGGCTTTAACAACAGGCTTCGACCTCGACTTGGATCGGGGTCTCTGACAGGATT
CCTGATAAGGCCTCAATGGCCATTTAAGGTAAGCTTGAATCACGACATGCTATCGTGGAGTTTGTCGGAATATGAGGCTAAGCGAGACACATCTAGAAATGTTTTTGTGG
TCTACTTTGAAGGTAAAGATCTTTTTAGCCTTAGCTCTGAAGTGCCGTTCTTCACGCTCCTGCATGGTAATCACAGCGGACTTGCGGGTCGTACCACTTTGGATAAGGTG
GTCGTAATGGCTCTACGGGTACGGGAGCTAATAGATTACCTTGAAATAATTGGGATAACAACTCGGTATAGGATATTGGGATCGAATGAAAGCTCTCTCGCTTTAGTTGT
CTCCGACTACTATGTGACAAATGTTTGTGGATCATCTTGCAGAGTCAATGAGTTTATGGGTACCGTAGAAGGACTGTATGCCACGAATCCTTGTTGGTACTTCCCCTTGC
GCTTCGAAACTACTGCCTGA
Protein sequenceShow/hide protein sequence
MVLNSPLVLWVANISADLCQYVACNPERFSSHHDWLDVVSFLSSFGFDLDLDQVRFNQMMKCNGPGFNNRLRPRLGSGFDLDLDRVRFNRMIKCNGPGFNNRLRPRLGSG
FDLDLDRVRFNRMIKCDGPGFNNRLRPRLGSGSLTGFLIRPQWPFKVSLNHDMLSWSLSEYEAKRDTSRNVFVVYFEGKDLFSLSSEVPFFTLLHGNHSGLAGRTTLDKV
VVMALRVRELIDYLEIIGITTRYRILGSNESSLALVVSDYYVTNVCGSSCRVNEFMGTVEGLYATNPCWYFPLRFETTA