; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g15570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:11765443..11769651
RNA-Seq ExpressionMoc05g15570
SyntenyMoc05g15570
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]8.0e-4189.8Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTSIIALLAAQ+LNGENYKQWKSNLNTILVID+L+FVLQE+CPQA  PNATVAVR  YD+WIKANDKAKVYILASISDVLAKKHEDT+TAKEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]3.3e-3477.32Show/hide
Query:  STSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        STSIIALLAA+K N ENY QWK+NLNTILV+D+LRF+L E CPQAPTPNA  A R+ YD+WIKANDKA VYIL SISDVL+KKHE  VTA+EIMDSL
Subjt:  STSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]2.9e-3884.69Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTSII LL AQKLN ENYKQWKSN+NTIL+ID+LRFVLQE+CPQAP PNATVAVRN+YD+WIKANDKAKV ILASISDVLAKKHE++V  KEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]6.1e-4189.8Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MS SIIALLAAQKLNGENY+QWKSNLNTILVID+LRFVLQE+CPQAP  NATVAVRN YD+WIK+NDKAKVYILASISDVLAKKHEDTVT KEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

XP_022158202.1 uncharacterized protein LOC111024739 [Momordica charantia]1.4e-3274.49Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTS+IALLA +KLNG+NY QWK+NLN ILV+D+LRFVL E C Q PTPNA  A R+ YD+WIKANDKAKVYI ASISDVLAKKH+  VT +EIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200953.9e-4189.8Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTSIIALLAAQ+LNGENYKQWKSNLNTILVID+L+FVLQE+CPQA  PNATVAVR  YD+WIKANDKAKVYILASISDVLAKKHEDT+TAKEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

A0A6J1DW68 uncharacterized protein LOC1110246371.4e-3884.69Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTSII LL AQKLN ENYKQWKSN+NTIL+ID+LRFVLQE+CPQAP PNATVAVRN+YD+WIKANDKAKV ILASISDVLAKKHE++V  KEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

A0A6J1DWI4 uncharacterized protein LOC1110241451.6e-3477.32Show/hide
Query:  STSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        STSIIALLAA+K N ENY QWK+NLNTILV+D+LRF+L E CPQAPTPNA  A R+ YD+WIKANDKA VYIL SISDVL+KKHE  VTA+EIMDSL
Subjt:  STSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

A0A6J1DWL0 uncharacterized protein LOC1110247343.0e-4189.8Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MS SIIALLAAQKLNGENY+QWKSNLNTILVID+LRFVLQE+CPQAP  NATVAVRN YD+WIK+NDKAKVYILASISDVLAKKHEDTVT KEIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

A0A6J1DWL4 uncharacterized protein LOC1110247396.6e-3374.49Show/hide
Query:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL
        MSTS+IALLA +KLNG+NY QWK+NLN ILV+D+LRFVL E C Q PTPNA  A R+ YD+WIKANDKAKVYI ASISDVLAKKH+  VT +EIMDSL
Subjt:  MSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGGCCCACTCTGTAAATGTTACAGACGACTCGATCCAGGGAAGTGGGGAGTTTAATGATGTGAGCAGCACCGCAACGTTGCCCTTAGGTGCCGTGACGCTGTC
CCGGATGTTCTCCGACGTGGATTCGTTGCTCCGCATGTCTACTTCTATAATTGCTTTGTTAGCCGCTCAAAAACTTAACGGCGAGAATTATAAACAATGGAAATCGAATC
TAAACACTATTCTCGTGATAGATAATCTTAGGTTCGTCTTGCAAGAGAATTGTCCTCAAGCTCCTACGCCTAATGCGACTGTGGCAGTGCGCAATGTCTATGACAAATGG
ATCAAGGCCAACGACAAGGCTAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCATGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGATACGGCCCACTCTGTAAATGTTACAGACGACTCGATCCAGGGAAGTGGGGAGTTTAATGATGTGAGCAGCACCGCAACGTTGCCCTTAGGTGCCGTGACGCTGTC
CCGGATGTTCTCCGACGTGGATTCGTTGCTCCGCATGTCTACTTCTATAATTGCTTTGTTAGCCGCTCAAAAACTTAACGGCGAGAATTATAAACAATGGAAATCGAATC
TAAACACTATTCTCGTGATAGATAATCTTAGGTTCGTCTTGCAAGAGAATTGTCCTCAAGCTCCTACGCCTAATGCGACTGTGGCAGTGCGCAATGTCTATGACAAATGG
ATCAAGGCCAACGACAAGGCTAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCATGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGTA
G
Protein sequenceShow/hide protein sequence
MDTAHSVNVTDDSIQGSGEFNDVSSTATLPLGAVTLSRMFSDVDSLLRMSTSIIALLAAQKLNGENYKQWKSNLNTILVIDNLRFVLQENCPQAPTPNATVAVRNVYDKW
IKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSL