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Moc05g15580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:11769718..11770188
RNA-Seq ExpressionMoc05g15580
SyntenyMoc05g15580
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-3566.67Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKGSNP
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG +P
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKGSNP
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]4.1e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.0e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
A0A5A7TU93 Gag/pol protein2.0e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
A0A5A7V4M1 Gag/pol protein2.0e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
A0A5A7V6N0 Gag/pol protein5.2e-3666.67Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKGSNP
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG +P
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKGSNP
A0A5D3CPJ6 Gag/pol protein2.0e-3567.38Show/hide
Query:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG
        M E  SVREHVLN+MVHFNVAE NGAVIDE SQVSFILESL +SFL FRSNAVM K+ YTLTTLLNELQT++SL+K K Q+G+ NVATS ++FH GS+SG
Subjt:  MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATS-KRFHPGSSSG

Query:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
        TK  PSS G+K +KKKK  G+G+K + AAA   K     KG
Subjt:  TKYAPSSFGSKTFKKKKATGKGSKPDSAAAAAKKGKAKVKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGAGTTTCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTTGCAGAGTCAAACGGGGCTGTTATAGACGAGCAGAGTCAGGTCAGCTTTAT
TCTGGAATCTCTTCTGAAAAGTTTCCTGTCATTCCGCAGTAATGCAGTTATGAAAAAGTTGGAATACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTATCAGTCTC
TTATAAAAAGTAAGAGACAAGAAGGGGACACAAATGTTGCCACCTCAAAGAGGTTCCACCCAGGTTCGTCCTCTGGAACCAAGTATGCACCCTCTTCTTTTGGAAGTAAG
ACTTTCAAGAAGAAGAAGGCTACTGGTAAGGGGTCTAAACCTGACTCCGCTGCTGCCGCAGCCAAGAAAGGCAAGGCGAAGGTGAAGGGATCGAATCCCAAGCGGAAGCG
TTTTATCGCTTGTGATTCAATTTGGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGAGTTTCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTTGCAGAGTCAAACGGGGCTGTTATAGACGAGCAGAGTCAGGTCAGCTTTAT
TCTGGAATCTCTTCTGAAAAGTTTCCTGTCATTCCGCAGTAATGCAGTTATGAAAAAGTTGGAATACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTATCAGTCTC
TTATAAAAAGTAAGAGACAAGAAGGGGACACAAATGTTGCCACCTCAAAGAGGTTCCACCCAGGTTCGTCCTCTGGAACCAAGTATGCACCCTCTTCTTTTGGAAGTAAG
ACTTTCAAGAAGAAGAAGGCTACTGGTAAGGGGTCTAAACCTGACTCCGCTGCTGCCGCAGCCAAGAAAGGCAAGGCGAAGGTGAAGGGATCGAATCCCAAGCGGAAGCG
TTTTATCGCTTGTGATTCAATTTGGTTTTAG
Protein sequenceShow/hide protein sequence
MKESFSVREHVLNLMVHFNVAESNGAVIDEQSQVSFILESLLKSFLSFRSNAVMKKLEYTLTTLLNELQTYQSLIKSKRQEGDTNVATSKRFHPGSSSGTKYAPSSFGSK
TFKKKKATGKGSKPDSAAAAAKKGKAKVKGSNPKRKRFIACDSIWF