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Moc05g15730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:11839808..11841902
RNA-Seq ExpressionMoc05g15730
SyntenyMoc05g15730
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]1.9e-2686.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QA APNATVAVR  YDRWIKAN+K KVYILASISDVLAKKHEDT+TA+EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]6.5e-2786.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAPAPNAT+AVR  YDRWIKAN+K KVYIL+SISDVLAKKHEDTVTA+EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]5.0e-1969.33Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVL E C QAP  NA  A +  YDRWIKAN+K K+YILA+IS+VLAKKH+  VTA EIMDSLQ MFGQPS+QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]1.4e-2482.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAPAPNATVAVR +YDRWIKAN+K KV ILASISDVLAKKHE++V  +EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]4.2e-2685.33Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAP  NATVAVR  YDRWIK+N+K KVYILASISDVLAKKHEDTVT +EIMDSLQSMFGQPSLQA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200959.2e-2786.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QA APNATVAVR  YDRWIKAN+K KVYILASISDVLAKKHEDT+TA+EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

A0A6J1DMS3 uncharacterized protein LOC1110220003.2e-2786.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAPAPNAT+AVR  YDRWIKAN+K KVYIL+SISDVLAKKHEDTVTA+EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

A0A6J1DVX8 uncharacterized protein LOC1110235912.4e-1969.33Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVL E C QAP  NA  A +  YDRWIKAN+K K+YILA+IS+VLAKKH+  VTA EIMDSLQ MFGQPS+QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

A0A6J1DW68 uncharacterized protein LOC1110246376.6e-2582.67Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAPAPNATVAVR +YDRWIKAN+K KV ILASISDVLAKKHE++V  +EIMDSLQSMFGQPS QA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

A0A6J1DWL0 uncharacterized protein LOC1110247342.1e-2685.33Show/hide
Query:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA
        L FVLQEDC QAP  NATVAVR  YDRWIK+N+K KVYILASISDVLAKKHEDTVT +EIMDSLQSMFGQPSLQA
Subjt:  LGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKTKVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCAGGGACAGCACACAGCGCCACGACGCTGCACTGTAGCGCTACGACGCTGCTGCTGTGACATTTTGCTACAGCAGCGCCGTGGCGCTGCCCTTAGG
CGCCGAGGCGATGTTCCTGGTGTTTTTCGGCGCGTTTCCAAGGTTTTGGTTCGCGGTTCGAGGGCGGTTGCAGTCGTTTTCTCATTTTTGTATTATTTTGCTTTC
TTAGGGTTTGTCTTGCAAGAGGATTGTTCTCAAGCTCCTGCACCTAACGCCACTGTGGCGGTGCGCACCGTCTATGACAGATGGATCAAGGCCAATGAGAAGACC
AAGGTCTACATCTTGGCAAGCATATCTGATGTGCTTGCTAAGAAGCACGAAGACACGGTCACCGCTGAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAA
CCCTCCTTACAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGCAGGGACAGCACACAGCGCCACGACGCTGCACTGTAGCGCTACGACGCTGCTGCTGTGACATTTTGCTACAGCAGCGCCGTGGCGCTGCCCTTAGG
CGCCGAGGCGATGTTCCTGGTGTTTTTCGGCGCGTTTCCAAGGTTTTGGTTCGCGGTTCGAGGGCGGTTGCAGTCGTTTTCTCATTTTTGTATTATTTTGCTTTC
TTAGGGTTTGTCTTGCAAGAGGATTGTTCTCAAGCTCCTGCACCTAACGCCACTGTGGCGGTGCGCACCGTCTATGACAGATGGATCAAGGCCAATGAGAAGACC
AAGGTCTACATCTTGGCAAGCATATCTGATGTGCTTGCTAAGAAGCACGAAGACACGGTCACCGCTGAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAA
CCCTCCTTACAGGCTTGA
Protein sequenceShow/hide protein sequence
MALQGQHTAPRRCTVALRRCCCDILLQQRRGAALRRRGDVPGVFRRVSKVLVRGSRAVAVVFSFLYYFAFLGFVLQEDCSQAPAPNATVAVRTVYDRWIKANEKT
KVYILASISDVLAKKHEDTVTAEEIMDSLQSMFGQPSLQA