; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g15890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g15890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:11943753..11944616
RNA-Seq ExpressionMoc05g15890
SyntenyMoc05g15890
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149799.1 uncharacterized protein LOC111018145 [Momordica charantia]5.0e-10387.84Show/hide
Query:  NQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELE
        NQ G+VPPFPP A +E A P VPP V QVNPQLVLLVEALQA+INN AGVGGVQAQPPQHLHTPQSEA FIKDFKRYGP TFD ESERATA EEWIRELE
Subjt:  NQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELE

Query:  ALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTE
        ALY YLGCEDQFKVKGAV MLRGEALN WDSIA AEDHANVPIPW RFKDLLYDYYY ET+KDMKEAEFLHLVQGTLSVAQYE KFAELS F LELIPTE
Subjt:  ALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTE

Query:  ALKIKRFVKGLRKGIRGLVDLQ
        ALKIKRFVKGLRKGIRG VDLQ
Subjt:  ALKIKRFVKGLRKGIRGLVDLQ

XP_022155000.1 uncharacterized protein LOC111022144 [Momordica charantia]2.6e-9188.48Show/hide
Query:  LHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLET
        LH  +SEAHFIKDFKRYGPPTFDGESERATA EEWIRELEA Y YLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANV IPWARFKDLLYDYYYLET
Subjt:  LHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLET

Query:  MKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        +KDMKEAEFLHLVQGTLSVAQYE KF ELSRF LELI   A+KIKRFVKGL KGIRG VDLQRP +YAEAVRGA+IMDKDVSNKA  LPEV
Subjt:  MKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

XP_022156326.1 uncharacterized protein LOC111023247 [Momordica charantia]1.5e-10773.4Show/hide
Query:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH
        MPPRHSMRLRADADPAPG                                                             GVGGVQA PPQHLHTPQSEA 
Subjt:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH

Query:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF
        FIKDFKRYGPPTFDGESERATAVEEWIRELEALY YLGCEDQFKVKGAVFMLRGEALNWWDS+AAAED+ANVPIPWARFK+LLYDYYY ET+KDMKEAEF
Subjt:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF

Query:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        LHLVQGTLSVAQYE KF ELSRF LELIPTEALKIKRFVKGLRKGIRG VDLQRPTTYAEAVRGA++MDKDVSNKASPLPEV
Subjt:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

XP_022156546.1 uncharacterized protein LOC111023424 [Momordica charantia]1.6e-11474.47Show/hide
Query:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH
        MPPR SMRLRAD DPAP GEN  DPPPPP  +QAG+VPPFPPAA QE                         A+INN AGVGG Q QPP+HLHTPQSEA 
Subjt:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH

Query:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF
        FIKDFKRYGPPTF G SERAT  EEW+RELEALY YLGCEDQFKVKGAVFMLR EALNWWDS+AA EDHANVP+PWARFK+LLYD+YY ET++DMKE EF
Subjt:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF

Query:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        LHLVQGTL+VAQYE KF ELS F LELIPTEA+KIKRFVKGL KGIRG VDLQRP TYAEAVRG +IMDKDVSN+  PL EV
Subjt:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

XP_022158637.1 uncharacterized protein LOC111025088 [Momordica charantia]2.3e-9285.2Show/hide
Query:  VPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEA
        VPQVNPQ+ LL EALQA+INN AGVGG QA PP+H HTPQSEA FIKDFKRYGPPTFDG SERATA E W+RELEALY YLGCEDQFKVKG VFMLRGEA
Subjt:  VPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEA

Query:  LNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDL
        LNWWDSIA AEDHANVP+PWARFKDLLYDYYY ET+KD KEAEFLHL QGTL+VAQYE KF ELSRF LE IPTEA+KIKRFVKGLRKGIRG VDL
Subjt:  LNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDL

TrEMBL top hitse value%identityAlignment
A0A6J1D841 uncharacterized protein LOC1110181452.4e-10387.84Show/hide
Query:  NQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELE
        NQ G+VPPFPP A +E A P VPP V QVNPQLVLLVEALQA+INN AGVGGVQAQPPQHLHTPQSEA FIKDFKRYGP TFD ESERATA EEWIRELE
Subjt:  NQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELE

Query:  ALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTE
        ALY YLGCEDQFKVKGAV MLRGEALN WDSIA AEDHANVPIPW RFKDLLYDYYY ET+KDMKEAEFLHLVQGTLSVAQYE KFAELS F LELIPTE
Subjt:  ALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTE

Query:  ALKIKRFVKGLRKGIRGLVDLQ
        ALKIKRFVKGLRKGIRG VDLQ
Subjt:  ALKIKRFVKGLRKGIRGLVDLQ

A0A6J1DL73 uncharacterized protein LOC1110221441.2e-9188.48Show/hide
Query:  LHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLET
        LH  +SEAHFIKDFKRYGPPTFDGESERATA EEWIRELEA Y YLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANV IPWARFKDLLYDYYYLET
Subjt:  LHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLET

Query:  MKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        +KDMKEAEFLHLVQGTLSVAQYE KF ELSRF LELI   A+KIKRFVKGL KGIRG VDLQRP +YAEAVRGA+IMDKDVSNKA  LPEV
Subjt:  MKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

A0A6J1DUM2 uncharacterized protein LOC1110232477.2e-10873.4Show/hide
Query:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH
        MPPRHSMRLRADADPAPG                                                             GVGGVQA PPQHLHTPQSEA 
Subjt:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH

Query:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF
        FIKDFKRYGPPTFDGESERATAVEEWIRELEALY YLGCEDQFKVKGAVFMLRGEALNWWDS+AAAED+ANVPIPWARFK+LLYDYYY ET+KDMKEAEF
Subjt:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF

Query:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        LHLVQGTLSVAQYE KF ELSRF LELIPTEALKIKRFVKGLRKGIRG VDLQRPTTYAEAVRGA++MDKDVSNKASPLPEV
Subjt:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

A0A6J1DVA0 uncharacterized protein LOC1110234248.0e-11574.47Show/hide
Query:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH
        MPPR SMRLRAD DPAP GEN  DPPPPP  +QAG+VPPFPPAA QE                         A+INN AGVGG Q QPP+HLHTPQSEA 
Subjt:  MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAH

Query:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF
        FIKDFKRYGPPTF G SERAT  EEW+RELEALY YLGCEDQFKVKGAVFMLR EALNWWDS+AA EDHANVP+PWARFK+LLYD+YY ET++DMKE EF
Subjt:  FIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEF

Query:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV
        LHLVQGTL+VAQYE KF ELS F LELIPTEA+KIKRFVKGL KGIRG VDLQRP TYAEAVRG +IMDKDVSN+  PL EV
Subjt:  LHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEV

A0A6J1DXQ7 uncharacterized protein LOC1110250881.1e-9285.2Show/hide
Query:  VPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEA
        VPQVNPQ+ LL EALQA+INN AGVGG QA PP+H HTPQSEA FIKDFKRYGPPTFDG SERATA E W+RELEALY YLGCEDQFKVKG VFMLRGEA
Subjt:  VPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDFKRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEA

Query:  LNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDL
        LNWWDSIA AEDHANVP+PWARFKDLLYDYYY ET+KD KEAEFLHL QGTL+VAQYE KF ELSRF LE IPTEA+KIKRFVKGLRKGIRG VDL
Subjt:  LNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSVAQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCCGTCATAGTATGAGATTGCGAGCTGACGCCGACCCCGCTCCCGGAGGTGAGAACGGAGTGGATCCACCGCCCCCTCCTGCTGAGAATCAGGCAGGA
ATAGTCCCTCCATTTCCTCCAGCAGCAGTTCAAGAGTGGGCTGATCCTCCAGTTCCCCCAGTAGTTCCTCAGGTGAACCCCCAATTGGTGTTGCTTGTGGAGGCA
TTGCAAGCAATGATCAATAACGTAGCAGGGGTGGGCGGAGTTCAAGCTCAGCCACCCCAACATCTTCATACTCCCCAGAGCGAGGCTCACTTCATCAAGGATTTC
AAGCGTTACGGACCCCCAACCTTTGACGGTGAGAGTGAAAGAGCGACCGCAGTGGAAGAGTGGATCAGAGAGTTGGAAGCCCTTTACGTGTATCTTGGTTGCGAG
GACCAATTCAAGGTGAAGGGTGCGGTTTTTATGTTGAGGGGCGAGGCCCTCAACTGGTGGGACTCAATAGCAGCGGCAGAGGATCATGCAAATGTACCAATTCCG
TGGGCGAGGTTCAAGGACTTGTTGTACGACTACTACTATCTGGAGACTATGAAAGACATGAAGGAGGCGGAATTCCTTCATCTAGTCCAAGGAACCTTATCGGTG
GCACAATATGAAATGAAGTTCGCAGAACTCTCCCGTTTCGTTTTAGAGTTGATTCCCACTGAGGCATTGAAGATCAAGAGGTTTGTTAAAGGCTTGCGCAAGGGA
ATCAGAGGCCTGGTGGATCTTCAGCGACCCACCACCTATGCTGAAGCGGTTAGGGGCGCCATGATTATGGATAAGGATGTCTCCAACAAGGCCTCACCCCTGCCA
GAGGTCGATCATCTTCAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCCGTCATAGTATGAGATTGCGAGCTGACGCCGACCCCGCTCCCGGAGGTGAGAACGGAGTGGATCCACCGCCCCCTCCTGCTGAGAATCAGGCAGGA
ATAGTCCCTCCATTTCCTCCAGCAGCAGTTCAAGAGTGGGCTGATCCTCCAGTTCCCCCAGTAGTTCCTCAGGTGAACCCCCAATTGGTGTTGCTTGTGGAGGCA
TTGCAAGCAATGATCAATAACGTAGCAGGGGTGGGCGGAGTTCAAGCTCAGCCACCCCAACATCTTCATACTCCCCAGAGCGAGGCTCACTTCATCAAGGATTTC
AAGCGTTACGGACCCCCAACCTTTGACGGTGAGAGTGAAAGAGCGACCGCAGTGGAAGAGTGGATCAGAGAGTTGGAAGCCCTTTACGTGTATCTTGGTTGCGAG
GACCAATTCAAGGTGAAGGGTGCGGTTTTTATGTTGAGGGGCGAGGCCCTCAACTGGTGGGACTCAATAGCAGCGGCAGAGGATCATGCAAATGTACCAATTCCG
TGGGCGAGGTTCAAGGACTTGTTGTACGACTACTACTATCTGGAGACTATGAAAGACATGAAGGAGGCGGAATTCCTTCATCTAGTCCAAGGAACCTTATCGGTG
GCACAATATGAAATGAAGTTCGCAGAACTCTCCCGTTTCGTTTTAGAGTTGATTCCCACTGAGGCATTGAAGATCAAGAGGTTTGTTAAAGGCTTGCGCAAGGGA
ATCAGAGGCCTGGTGGATCTTCAGCGACCCACCACCTATGCTGAAGCGGTTAGGGGCGCCATGATTATGGATAAGGATGTCTCCAACAAGGCCTCACCCCTGCCA
GAGGTCGATCATCTTCAAGTGTGA
Protein sequenceShow/hide protein sequence
MPPRHSMRLRADADPAPGGENGVDPPPPPAENQAGIVPPFPPAAVQEWADPPVPPVVPQVNPQLVLLVEALQAMINNVAGVGGVQAQPPQHLHTPQSEAHFIKDF
KRYGPPTFDGESERATAVEEWIRELEALYVYLGCEDQFKVKGAVFMLRGEALNWWDSIAAAEDHANVPIPWARFKDLLYDYYYLETMKDMKEAEFLHLVQGTLSV
AQYEMKFAELSRFVLELIPTEALKIKRFVKGLRKGIRGLVDLQRPTTYAEAVRGAMIMDKDVSNKASPLPEVDHLQV