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Moc05g16010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g16010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr5:12061210..12065402
RNA-Seq ExpressionMoc05g16010
SyntenyMoc05g16010
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]4.4e-1549.58Show/hide
Query:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK
        MNRN QDP PPQNPPVNGDMA                                      GINN LPQAAQ ELKPV+F MLQTMG            HLK
Subjt:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK

Query:  SFIEIANAFQLPAIFEDAL
        SFIEIANAFQLP + E+AL
Subjt:  SFIEIANAFQLPAIFEDAL

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]2.3e-0845.1Show/hide
Query:  FDPEIERTLEMNRNPQDPSPPQNPP----VNGDMAG-------INNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFED
        F+ E E T+       D  PPQNP     VNG+MA        I NP+P+AA FELKP++FQMLQT+G            HLK+F +IA AF+ P I +D
Subjt:  FDPEIERTLEMNRNPQDPSPPQNPP----VNGDMAG-------INNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFED

Query:  AL
        AL
Subjt:  AL

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]2.9e-0655Show/hide
Query:  AGINNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFEDA
        +GI NP+P    FELKP++FQMLQT+G            HLKSFI+IANAF+LP I +DA
Subjt:  AGINNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFEDA

XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]9.9e-0741.1Show/hide
Query:  MISSHEVSSPLFAKMLAIHEGIRLAERTNLENVALKSNSLEAIRLINGETRWENAIESWILDIKALATSFHPL
        M+  H V +PL AK+LAI EG+ LA R  +  V ++++SLEA+ LI  ++ W+    SW+ DI+A A  F  +
Subjt:  MISSHEVSSPLFAKMLAIHEGIRLAERTNLENVALKSNSLEAIRLINGETRWENAIESWILDIKALATSFHPL

XP_022158836.1 uncharacterized protein LOC111025302 [Momordica charantia]4.7e-1752.1Show/hide
Query:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK
        MNRN QDP PPQNPPVNGDMA                                      GINNPLPQAAQFELKPV+FQ+LQTMG            HLK
Subjt:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK

Query:  SFIEIANAFQLPAIFEDAL
        SFIEIANAFQLP   EDAL
Subjt:  SFIEIANAFQLPAIFEDAL

TrEMBL top hitse value%identityAlignment
A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.1e-1549.58Show/hide
Query:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK
        MNRN QDP PPQNPPVNGDMA                                      GINN LPQAAQ ELKPV+F MLQTMG            HLK
Subjt:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK

Query:  SFIEIANAFQLPAIFEDAL
        SFIEIANAFQLP + E+AL
Subjt:  SFIEIANAFQLPAIFEDAL

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110221601.1e-0845.1Show/hide
Query:  FDPEIERTLEMNRNPQDPSPPQNPP----VNGDMAG-------INNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFED
        F+ E E T+       D  PPQNP     VNG+MA        I NP+P+AA FELKP++FQMLQT+G            HLK+F +IA AF+ P I +D
Subjt:  FDPEIERTLEMNRNPQDPSPPQNPP----VNGDMAG-------INNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFED

Query:  AL
        AL
Subjt:  AL

A0A6J1DW02 uncharacterized protein LOC1110248971.4e-0655Show/hide
Query:  AGINNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFEDA
        +GI NP+P    FELKP++FQMLQT+G            HLKSFI+IANAF+LP I +DA
Subjt:  AGINNPLPQAAQFELKPVIFQMLQTMG------------HLKSFIEIANAFQLPAIFEDA

A0A6J1DZK3 uncharacterized protein LOC1110249684.8e-0741.1Show/hide
Query:  MISSHEVSSPLFAKMLAIHEGIRLAERTNLENVALKSNSLEAIRLINGETRWENAIESWILDIKALATSFHPL
        M+  H V +PL AK+LAI EG+ LA R  +  V ++++SLEA+ LI  ++ W+    SW+ DI+A A  F  +
Subjt:  MISSHEVSSPLFAKMLAIHEGIRLAERTNLENVALKSNSLEAIRLINGETRWENAIESWILDIKALATSFHPL

A0A6J1E251 uncharacterized protein LOC1110253022.3e-1752.1Show/hide
Query:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK
        MNRN QDP PPQNPPVNGDMA                                      GINNPLPQAAQFELKPV+FQ+LQTMG            HLK
Subjt:  MNRNPQDPSPPQNPPVNGDMA--------------------------------------GINNPLPQAAQFELKPVIFQMLQTMG------------HLK

Query:  SFIEIANAFQLPAIFEDAL
        SFIEIANAFQLP   EDAL
Subjt:  SFIEIANAFQLPAIFEDAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTTCACACGAAGTTTCTTCTCCCCTATTTGCTAAAATGCTTGCGATTCATGAAGGAATTCGTTTGGCCGAACGTACGAATTTGGAGAATGTTGCTCTT
AAATCAAATTCTCTGGAAGCAATTCGCCTTATCAATGGAGAAACTCGATGGGAGAATGCAATTGAAAGCTGGATTCTAGATATTAAGGCTTTGGCTACCTCTTTT
CATCCATTACCTTCTTACATGTTGGTTACCCTAGCCTTTGCAGCAACCAAAAGCGATAATGAAATAGTAGAACTCAAATCCCAGGAAAAGTTAGGAATAAAGCCT
GGGTCTGGTTGGTTGACCTTTGATCCAGAGATTGAAAGAACCCTTGAGATGAATAGAAATCCACAAGATCCTTCACCGCCACAAAATCCACCTGTGAATGGAGAT
ATGGCAGGGATAAATAATCCTTTACCTCAAGCCGCACAGTTTGAGCTCAAGCCAGTCATATTCCAGATGTTACAGACGATGGGCCATCTCAAATCCTTTATTGAA
ATAGCTAATGCATTTCAACTTCCTGCTATCTTTGAGGATGCACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTTCACACGAAGTTTCTTCTCCCCTATTTGCTAAAATGCTTGCGATTCATGAAGGAATTCGTTTGGCCGAACGTACGAATTTGGAGAATGTTGCTCTT
AAATCAAATTCTCTGGAAGCAATTCGCCTTATCAATGGAGAAACTCGATGGGAGAATGCAATTGAAAGCTGGATTCTAGATATTAAGGCTTTGGCTACCTCTTTT
CATCCATTACCTTCTTACATGTTGGTTACCCTAGCCTTTGCAGCAACCAAAAGCGATAATGAAATAGTAGAACTCAAATCCCAGGAAAAGTTAGGAATAAAGCCT
GGGTCTGGTTGGTTGACCTTTGATCCAGAGATTGAAAGAACCCTTGAGATGAATAGAAATCCACAAGATCCTTCACCGCCACAAAATCCACCTGTGAATGGAGAT
ATGGCAGGGATAAATAATCCTTTACCTCAAGCCGCACAGTTTGAGCTCAAGCCAGTCATATTCCAGATGTTACAGACGATGGGCCATCTCAAATCCTTTATTGAA
ATAGCTAATGCATTTCAACTTCCTGCTATCTTTGAGGATGCACTATGA
Protein sequenceShow/hide protein sequence
MISSHEVSSPLFAKMLAIHEGIRLAERTNLENVALKSNSLEAIRLINGETRWENAIESWILDIKALATSFHPLPSYMLVTLAFAATKSDNEIVELKSQEKLGIKP
GSGWLTFDPEIERTLEMNRNPQDPSPPQNPPVNGDMAGINNPLPQAAQFELKPVIFQMLQTMGHLKSFIEIANAFQLPAIFEDAL