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Moc05g16220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g16220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:12206171..12206482
RNA-Seq ExpressionMoc05g16220
SyntenyMoc05g16220
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KFK32351.1 hypothetical protein AALP_AA6G230500 [Arabis alpina]9.4e-2052.63Show/hide
Query:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        R+ P ++ELND  + + LDFL E R+ + +RIA +Q+ AARYYNS+V+  +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

KFK32352.1 hypothetical protein AALP_AA6G230500 [Arabis alpina]9.4e-2052.63Show/hide
Query:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        R+ P ++ELND  + + LDFL E R+ + +RIA +Q+ AARYYNS+V+  +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

KFK44297.1 hypothetical protein AALP_AA1G239700 [Arabis alpina]1.6e-1951.02Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        P  R+ P  ++LND  + + LDFL E R  + +RIA +Q+ AARYYNS+V++ +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

XP_022156561.1 uncharacterized protein LOC111023436 [Momordica charantia]5.5e-2054.55Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE
        P  R+E      N+E +  SLD LEEHRE++ LR A++++R ARYYNS+VK   F+ G LVLRK M NT + T GA  P WEGPY+VT V+R GTY LE
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]1.9e-2054.55Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE
        P  R+E +    N+E +  +LD LEEHRE++ LR A++++R ARYYNS+VK   F+ G LVLRK M NT + T GALGP WEGPY+ T V+R GTY LE
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE

TrEMBL top hitse value%identityAlignment
A0A087GR49 Ribonuclease H4.5e-2052.63Show/hide
Query:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        R+ P ++ELND  + + LDFL E R+ + +RIA +Q+ AARYYNS+V+  +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

A0A087GR50 Ribonuclease H4.5e-2052.63Show/hide
Query:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        R+ P ++ELND  + + LDFL E R+ + +RIA +Q+ AARYYNS+V+  +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  RIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

A0A087HQ94 Uncharacterized protein7.8e-2051.02Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL
        P  R+ P  ++LND  + + LDFL E R  + +RIA +Q+ AARYYNS+V++ +F  G LVLR+   NT  R  G LG NWEGPY+VT V+RPG Y L
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRL

A0A6J1DVB6 uncharacterized protein LOC1110234362.7e-2054.55Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE
        P  R+E      N+E +  SLD LEEHRE++ LR A++++R ARYYNS+VK   F+ G LVLRK M NT + T GA  P WEGPY+VT V+R GTY LE
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE

A0A6J1DZU0 Ribonuclease H9.2e-2154.55Show/hide
Query:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE
        P  R+E +    N+E +  +LD LEEHRE++ LR A++++R ARYYNS+VK   F+ G LVLRK M NT + T GALGP WEGPY+ T V+R GTY LE
Subjt:  PPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACACCCCCGCTAAGGATTGAACCCTATGATAAAGAGCTCAATGACGAAGGAATCATGAATTCCCTAGATTTTTTGGAGGAACACAGGGAATCCTCCTGC
CTCCGCATTGCCAAGCATCAAAGCCGAGCAGCTAGGTATTACAATTCACGAGTGAAGCTGTGCAAGTTCGAAGTTGGAACCTTGGTGCTGAGAAAAGCAATGCTA
AACACGAATAACCGAACAGATGGAGCACTCGGCCCCAATTGGGAGGGCCCCTACCGAGTGACTGGCGTCATCCGACCGGGAACTTATAGGCTGGAAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACACCCCCGCTAAGGATTGAACCCTATGATAAAGAGCTCAATGACGAAGGAATCATGAATTCCCTAGATTTTTTGGAGGAACACAGGGAATCCTCCTGC
CTCCGCATTGCCAAGCATCAAAGCCGAGCAGCTAGGTATTACAATTCACGAGTGAAGCTGTGCAAGTTCGAAGTTGGAACCTTGGTGCTGAGAAAAGCAATGCTA
AACACGAATAACCGAACAGATGGAGCACTCGGCCCCAATTGGGAGGGCCCCTACCGAGTGACTGGCGTCATCCGACCGGGAACTTATAGGCTGGAAATATGA
Protein sequenceShow/hide protein sequence
METPPLRIEPYDKELNDEGIMNSLDFLEEHRESSCLRIAKHQSRAARYYNSRVKLCKFEVGTLVLRKAMLNTNNRTDGALGPNWEGPYRVTGVIRPGTYRLEI