; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g16320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g16320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:12253110..12268190
RNA-Seq ExpressionMoc05g16320
SyntenyMoc05g16320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]8.4e-1352.56Show/hide
Query:  IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        IR YAAP F + NP I  P I+  +F+L   +FQMLQTVG F G+ +ED   HLR F++V DSFK++G S+EV+R  L
Subjt:  IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

XP_022155867.1 uncharacterized protein LOC111022881 [Momordica charantia]8.4e-1368.97Show/hide
Query:  IETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        +E DRF+L  A+FQMLQTVGPFHGL+SED  RHL+YFMQV DSFK+EG SK  +R  L
Subjt:  IETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

XP_022158490.1 uncharacterized protein LOC111024970 [Momordica charantia]5.3e-1555.17Show/hide
Query:  LVLDEHE--IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        L++D+ E  IRAYAAPA +  +PVIA P IE +RF+L   +FQMLQTVG F G  SED   HLRYF++V DSF ++  SKE +R  L
Subjt:  LVLDEHE--IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

XP_022158768.1 uncharacterized protein LOC111025234 [Momordica charantia]1.3e-1660Show/hide
Query:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSLTRSGILLEH
        E EIRAYAAPAF+D NPVI +PIIE DRF+L  A+FQMLQ    FHGLASED  RHL+YFMQV +S KVE    E +  + +   +LL+H
Subjt:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSLTRSGILLEH

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]3.2e-1250.62Show/hide
Query:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        E  IRAYA PA  + NP I  P ++   F+L   +FQMLQT+G FHGL SED   HL+ F+ V DSF+ +G  K+V+R SL
Subjt:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

TrEMBL top hitse value%identityAlignment
A0A6J1DQJ0 uncharacterized protein LOC1110228814.1e-1368.97Show/hide
Query:  IETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        +E DRF+L  A+FQMLQTVGPFHGL+SED  RHL+YFMQV DSFK+EG SK  +R  L
Subjt:  IETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

A0A6J1DVZ9 uncharacterized protein LOC1110249702.6e-1555.17Show/hide
Query:  LVLDEHE--IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        L++D+ E  IRAYAAPA +  +PVIA P IE +RF+L   +FQMLQTVG F G  SED   HLRYF++V DSF ++  SKE +R  L
Subjt:  LVLDEHE--IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

A0A6J1DX14 uncharacterized protein LOC1110252346.1e-1760Show/hide
Query:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSLTRSGILLEH
        E EIRAYAAPAF+D NPVI +PIIE DRF+L  A+FQMLQ    FHGLASED  RHL+YFMQV +S KVE    E +  + +   +LL+H
Subjt:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSLTRSGILLEH

A0A6J1H7E4 uncharacterized protein LOC1114611681.6e-1250.62Show/hide
Query:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        E  IRAYA PA  + NP I  P ++   F+L   +FQMLQT+G FHGL SED   HL+ F+ V DSF+ +G  K+V+R SL
Subjt:  EHEIRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

U5CUI2 Retrotrans_gag domain-containing protein4.1e-1352.56Show/hide
Query:  IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL
        IR YAAP F + NP I  P I+  +F+L   +FQMLQTVG F G+ +ED   HLR F++V DSFK++G S+EV+R  L
Subjt:  IRAYAAPAFYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGATATGGTGAGGTGGAGGTTTTTGATGCTGGAACAAAGAGCATAGCTGTAACGCCCCGCGTTACTCATGTCCGGCCGTGCGTTACTCAGCCGTCACTCCCATT
TAACAACCTTCACGTCGACTACGGTCCGGCTAGCACCTCCCTCAGGCGGTCATTGACAAGCAGTGACGACTCCCGGCGAACTAGCAGCGACGGCGCACGGCAGATACATC
TAGCGAGCTTCATCCTCCGGTGTTCAACAACAGCTACGGTCAGCCCAGATCTTCAGTTCTTCAGCGTGTACAGACTCGCAGCGGCGCATCCCATAGCAGCAATGGCAGAT
TTGGGTTCACCGGCTTCGAGCAGTCCCACGAATGGCAAACTGTCGCAGCTTCTCCCGTGCGGCTACGCGACCAACCACCATACTGGAAACGTCCTCCTCTACGACACAAG
CTCGAAGCTTCTCGACCTGGATTCGGCAGCTCAAGCCTCCTCGACGTCTACCCATTTCAAACCCAAGAGGTTTTATGGTGAGATAGTAGGCACCTCCACCTTCCTCCTTC
TTGTTGTCCGCGAGACACCGAGCAGCCGCGCCTCCCTCGACCATACCTGCAGCAGCTTCACGGCGGTGCGGCGATTTCTGGCGGGGACCCACGAACGTCGGTGCAGCAGC
GAACGGCGGCGCGGCGCCTTCCGGCAGAGACCCACGAATAACGGTGTTCCTTTGAACTCTAGCGGAGGCTTCGACGCGATTTCATGGCGGTTCCGGCAGTTCCATAGCAG
CAGCGGCGCGTCTCCATCCTCGGGTGTTCCACAGCAGCTACGGCCAGCCCAGATCCACGATTTTGTGGCGGTGTGGTGTCTCGAGAAACAGCAGCAGCGTCCCCACCTCA
CTCCGGTGGCCCACAGCAGCGACGTTCTTCGGGTCAATACGACTCGAGGAGTTAGTCTTGTGGTATTAAAGAAGAGTGGAGCCTGCGAAGTAGTGATGTTTGGCCTTGGG
AATAAATGGCAAGGTCAGACATCAAGTACCGGAGAAGCAGGAGATAAAGGCTGCTTACTGAGTACTGTGGTTGTACTCATCCCTCTTTTCCCCTCCAGTTTTCAGTTTTT
CGTGTTCCTTCTTCTACCGGCGCCTCAACACTCACCGAAACACTCGACGGACGGCGACCACCGGCGACTTGACAGCAACAACGGTAGGCGACGGCGGCCGCGATTTCCGG
AAACGACGGGTGCGGCATCGGCAGCAACGGGCAGCAGCTACGCGCGGGTGACTGCGGCAGCAGCGGTGCACGGGCGGTGGCAGCAGCGTCGCGCGGGTTCCGAGCAGCGG
CGGAGGTGCACGACGTTCGGACAGCAGCAGTGGGCGCGGGTTTTTACAGCAGCAGGTCGTGGCGTGGATTATTGTAGTTGGAAGTTGTTACGTGTTGTCGTTTCATTGCT
AGACATTATGAGAATTCATGTTTTCGAGTTGTTGGTTGTGTTTGGTCGGGAGAGTTTGCCGGTAAAAAGAAATTTGAGTTGTGAATTGAAGTGTGGAAGACTTACTTATA
GGTTGACCTTGGAAGTTGATGCCTTGGGAATAAATGGCAAGGCCGAACATCAGGTTTCAATGGAGGGGTATTGGGGTCTTGGGAATAAATGTCAAGAACCAATACGCCGG
GTAGTCATTGGTACCTTGGGAATAAATGTCAAGGACTGGTGCATAGTTCTAGACTTTGGGAATAAATGGCAAGGTCGAACCTTAGGCAAGGTCGAGCACCAAGCGTTGTG
GAGAAAGGTCGGTATCTTGGGAATAAATGTCAAGAGCCGTTACGCCTCGAAAGGTATGAACCGGGCCGGCCGTGGTGATGACGTGGAGGAGAGAGAGTCGCCCCGCTACT
CGACGCTGGAATCTGCTGCAAAATGCCCAACTCGCCGTCGCTGCCTTGTTGTGCGTCGTTTTCGTCGCCGACTTGCTACTTCAGTTGTAGGTCCGTCGACTGGTACGGTC
GCCGGTGATGAAGGCTGTTGGGGCGAGGGGCGGCAGCTGGGGGATCCTTTAGATTCAAGGACGAATCCTCTTGAAGAACGGAATGATGATATGAACCGAGGTACCTTAAT
CATGTCACAAGGACTTCAAGGAAGATGTCAGAATTTTATTATCTTGCATGCTATCCAAGTTCTCAACAAGATAAAGTTGCATTTAATGAACTCAAGTGCATCTCGAGCTT
TATTCAAAACAAGTGAAGCATCAACTATGGAACTCAAGCTCAAGCTACTTCAAGTGGAGCTTCATTTAGTATTGGATGAGCATGAAATTAGAGCATATGCGGCTCCAGCT
TTCTATGACTCCAATCCCGTAATAGCAAATCCAATAATTGAAACTGATAGATTTCAGCTGAACCTGGCAATATTTCAAATGCTCCAGACTGTGGGACCATTTCATGGATT
GGCATCAGAAGATCTGCGTAGGCATTTGAGATATTTCATGCAAGTTGTAGATTCGTTTAAAGTAGAAGGAGCCAGTAAGGAGGTTATGCGCTATTCCCTTACTCGTTCAG
GAATACTACTGGAGCATGGTTGGATTCCCTACCAGCTGAATCAATCACCTCATGGAACAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGATATGGTGAGGTGGAGGTTTTTGATGCTGGAACAAAGAGCATAGCTGTAACGCCCCGCGTTACTCATGTCCGGCCGTGCGTTACTCAGCCGTCACTCCCATT
TAACAACCTTCACGTCGACTACGGTCCGGCTAGCACCTCCCTCAGGCGGTCATTGACAAGCAGTGACGACTCCCGGCGAACTAGCAGCGACGGCGCACGGCAGATACATC
TAGCGAGCTTCATCCTCCGGTGTTCAACAACAGCTACGGTCAGCCCAGATCTTCAGTTCTTCAGCGTGTACAGACTCGCAGCGGCGCATCCCATAGCAGCAATGGCAGAT
TTGGGTTCACCGGCTTCGAGCAGTCCCACGAATGGCAAACTGTCGCAGCTTCTCCCGTGCGGCTACGCGACCAACCACCATACTGGAAACGTCCTCCTCTACGACACAAG
CTCGAAGCTTCTCGACCTGGATTCGGCAGCTCAAGCCTCCTCGACGTCTACCCATTTCAAACCCAAGAGGTTTTATGGTGAGATAGTAGGCACCTCCACCTTCCTCCTTC
TTGTTGTCCGCGAGACACCGAGCAGCCGCGCCTCCCTCGACCATACCTGCAGCAGCTTCACGGCGGTGCGGCGATTTCTGGCGGGGACCCACGAACGTCGGTGCAGCAGC
GAACGGCGGCGCGGCGCCTTCCGGCAGAGACCCACGAATAACGGTGTTCCTTTGAACTCTAGCGGAGGCTTCGACGCGATTTCATGGCGGTTCCGGCAGTTCCATAGCAG
CAGCGGCGCGTCTCCATCCTCGGGTGTTCCACAGCAGCTACGGCCAGCCCAGATCCACGATTTTGTGGCGGTGTGGTGTCTCGAGAAACAGCAGCAGCGTCCCCACCTCA
CTCCGGTGGCCCACAGCAGCGACGTTCTTCGGGTCAATACGACTCGAGGAGTTAGTCTTGTGGTATTAAAGAAGAGTGGAGCCTGCGAAGTAGTGATGTTTGGCCTTGGG
AATAAATGGCAAGGTCAGACATCAAGTACCGGAGAAGCAGGAGATAAAGGCTGCTTACTGAGTACTGTGGTTGTACTCATCCCTCTTTTCCCCTCCAGTTTTCAGTTTTT
CGTGTTCCTTCTTCTACCGGCGCCTCAACACTCACCGAAACACTCGACGGACGGCGACCACCGGCGACTTGACAGCAACAACGGTAGGCGACGGCGGCCGCGATTTCCGG
AAACGACGGGTGCGGCATCGGCAGCAACGGGCAGCAGCTACGCGCGGGTGACTGCGGCAGCAGCGGTGCACGGGCGGTGGCAGCAGCGTCGCGCGGGTTCCGAGCAGCGG
CGGAGGTGCACGACGTTCGGACAGCAGCAGTGGGCGCGGGTTTTTACAGCAGCAGGTCGTGGCGTGGATTATTGTAGTTGGAAGTTGTTACGTGTTGTCGTTTCATTGCT
AGACATTATGAGAATTCATGTTTTCGAGTTGTTGGTTGTGTTTGGTCGGGAGAGTTTGCCGGTAAAAAGAAATTTGAGTTGTGAATTGAAGTGTGGAAGACTTACTTATA
GGTTGACCTTGGAAGTTGATGCCTTGGGAATAAATGGCAAGGCCGAACATCAGGTTTCAATGGAGGGGTATTGGGGTCTTGGGAATAAATGTCAAGAACCAATACGCCGG
GTAGTCATTGGTACCTTGGGAATAAATGTCAAGGACTGGTGCATAGTTCTAGACTTTGGGAATAAATGGCAAGGTCGAACCTTAGGCAAGGTCGAGCACCAAGCGTTGTG
GAGAAAGGTCGGTATCTTGGGAATAAATGTCAAGAGCCGTTACGCCTCGAAAGGTATGAACCGGGCCGGCCGTGGTGATGACGTGGAGGAGAGAGAGTCGCCCCGCTACT
CGACGCTGGAATCTGCTGCAAAATGCCCAACTCGCCGTCGCTGCCTTGTTGTGCGTCGTTTTCGTCGCCGACTTGCTACTTCAGTTGTAGGTCCGTCGACTGGTACGGTC
GCCGGTGATGAAGGCTGTTGGGGCGAGGGGCGGCAGCTGGGGGATCCTTTAGATTCAAGGACGAATCCTCTTGAAGAACGGAATGATGATATGAACCGAGGTACCTTAAT
CATGTCACAAGGACTTCAAGGAAGATGTCAGAATTTTATTATCTTGCATGCTATCCAAGTTCTCAACAAGATAAAGTTGCATTTAATGAACTCAAGTGCATCTCGAGCTT
TATTCAAAACAAGTGAAGCATCAACTATGGAACTCAAGCTCAAGCTACTTCAAGTGGAGCTTCATTTAGTATTGGATGAGCATGAAATTAGAGCATATGCGGCTCCAGCT
TTCTATGACTCCAATCCCGTAATAGCAAATCCAATAATTGAAACTGATAGATTTCAGCTGAACCTGGCAATATTTCAAATGCTCCAGACTGTGGGACCATTTCATGGATT
GGCATCAGAAGATCTGCGTAGGCATTTGAGATATTTCATGCAAGTTGTAGATTCGTTTAAAGTAGAAGGAGCCAGTAAGGAGGTTATGCGCTATTCCCTTACTCGTTCAG
GAATACTACTGGAGCATGGTTGGATTCCCTACCAGCTGAATCAATCACCTCATGGAACAATTTAA
Protein sequenceShow/hide protein sequence
MVGYGEVEVFDAGTKSIAVTPRVTHVRPCVTQPSLPFNNLHVDYGPASTSLRRSLTSSDDSRRTSSDGARQIHLASFILRCSTTATVSPDLQFFSVYRLAAAHPIAAMAD
LGSPASSSPTNGKLSQLLPCGYATNHHTGNVLLYDTSSKLLDLDSAAQASSTSTHFKPKRFYGEIVGTSTFLLLVVRETPSSRASLDHTCSSFTAVRRFLAGTHERRCSS
ERRRGAFRQRPTNNGVPLNSSGGFDAISWRFRQFHSSSGASPSSGVPQQLRPAQIHDFVAVWCLEKQQQRPHLTPVAHSSDVLRVNTTRGVSLVVLKKSGACEVVMFGLG
NKWQGQTSSTGEAGDKGCLLSTVVVLIPLFPSSFQFFVFLLLPAPQHSPKHSTDGDHRRLDSNNGRRRRPRFPETTGAASAATGSSYARVTAAAAVHGRWQQRRAGSEQR
RRCTTFGQQQWARVFTAAGRGVDYCSWKLLRVVVSLLDIMRIHVFELLVVFGRESLPVKRNLSCELKCGRLTYRLTLEVDALGINGKAEHQVSMEGYWGLGNKCQEPIRR
VVIGTLGINVKDWCIVLDFGNKWQGRTLGKVEHQALWRKVGILGINVKSRYASKGMNRAGRGDDVEERESPRYSTLESAAKCPTRRRCLVVRRFRRRLATSVVGPSTGTV
AGDEGCWGEGRQLGDPLDSRTNPLEERNDDMNRGTLIMSQGLQGRCQNFIILHAIQVLNKIKLHLMNSSASRALFKTSEASTMELKLKLLQVELHLVLDEHEIRAYAAPA
FYDSNPVIANPIIETDRFQLNLAIFQMLQTVGPFHGLASEDLRRHLRYFMQVVDSFKVEGASKEVMRYSLTRSGILLEHGWIPYQLNQSPHGTI