; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g16680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g16680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:12529312..12530343
RNA-Seq ExpressionMoc05g16680
SyntenyMoc05g16680
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]8.5e-3466.67Show/hide
Query:  STQNSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLI
        S +NS+ +A+S Y P+T EGVITR+EFD +K+KFD QVEAL  KCEK+E+ F+DG++GESPF SDI+E   P KFKT  MKPYDG KDPK+YVEVFEGL+
Subjt:  STQNSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLI

Query:  NFQAAFDAIKCPTF
        +FQAA DAIKC  F
Subjt:  NFQAAFDAIKCPTF

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]1.1e-3672.07Show/hide
Query:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ
        NS+ KAQS+YKPL  E VI R+EFDLMK++FDEQVEALK  CEK+E+PF+D ++GESPF SDIME P P KFKT  MKPYDG KDPK+YVEVFEGL++FQ
Subjt:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ

Query:  AAFDAIKCPTF
        AA DAIKC  F
Subjt:  AAFDAIKCPTF

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]9.4e-3348.07Show/hide
Query:  EETYNEMIQANRSGFQSRIQGGADDLLYNGDDQDPPLHSDDDAWGDVLLVLGSTQNSDFK---------------AQSRYKPLTFEGVITRKEFDLMKNK
        EE YN+M+Q   +  +S  Q   +D+   GD    P+  ++   GD+   L   +NS  +               A+S Y P+  EGVITR+EF+ +K+K
Subjt:  EETYNEMIQANRSGFQSRIQGGADDLLYNGDDQDPPLHSDDDAWGDVLLVLGSTQNSDFK---------------AQSRYKPLTFEGVITRKEFDLMKNK

Query:  FDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF
        FD QVEALK  CEK+E+ F+DG++GESPF SDI+E   P KFKT  MK YDG KDPK+YVEVFEGL++FQAA DAIKC  F
Subjt:  FDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.8e-3672.97Show/hide
Query:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ
        NSDFKAQS+YKPLT E VITR+EFDLMK++FDEQVEAL  KCEK+E  F+DG++GESPF SDI+E P P KFKT  MK YD  KDPK+YVEVFEGL++FQ
Subjt:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ

Query:  AAFDAIKCPTF
        AA DAIKC  F
Subjt:  AAFDAIKCPTF

XP_022159160.1 uncharacterized protein LOC111025585 [Momordica charantia]1.2e-3273.74Show/hide
Query:  LTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF
        +T E VITR+EFDLMK++FDEQVE L  KCEK E+PFNDGEMGESPF SD++ETP P KFK  AMKPYDG KDPK+YVEVFE L++FQAA DAIKC  F
Subjt:  LTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196344.1e-3466.67Show/hide
Query:  STQNSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLI
        S +NS+ +A+S Y P+T EGVITR+EFD +K+KFD QVEAL  KCEK+E+ F+DG++GESPF SDI+E   P KFKT  MKPYDG KDPK+YVEVFEGL+
Subjt:  STQNSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLI

Query:  NFQAAFDAIKCPTF
        +FQAA DAIKC  F
Subjt:  NFQAAFDAIKCPTF

A0A6J1DPC9 uncharacterized protein LOC1110222805.2e-3772.07Show/hide
Query:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ
        NS+ KAQS+YKPL  E VI R+EFDLMK++FDEQVEALK  CEK+E+PF+D ++GESPF SDIME P P KFKT  MKPYDG KDPK+YVEVFEGL++FQ
Subjt:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ

Query:  AAFDAIKCPTF
        AA DAIKC  F
Subjt:  AAFDAIKCPTF

A0A6J1DPN4 uncharacterized protein LOC1110230604.6e-3348.07Show/hide
Query:  EETYNEMIQANRSGFQSRIQGGADDLLYNGDDQDPPLHSDDDAWGDVLLVLGSTQNSDFK---------------AQSRYKPLTFEGVITRKEFDLMKNK
        EE YN+M+Q   +  +S  Q   +D+   GD    P+  ++   GD+   L   +NS  +               A+S Y P+  EGVITR+EF+ +K+K
Subjt:  EETYNEMIQANRSGFQSRIQGGADDLLYNGDDQDPPLHSDDDAWGDVLLVLGSTQNSDFK---------------AQSRYKPLTFEGVITRKEFDLMKNK

Query:  FDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF
        FD QVEALK  CEK+E+ F+DG++GESPF SDI+E   P KFKT  MK YDG KDPK+YVEVFEGL++FQAA DAIKC  F
Subjt:  FDEQVEALK--CEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF

A0A6J1DVR0 uncharacterized protein LOC1110245038.9e-3772.97Show/hide
Query:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ
        NSDFKAQS+YKPLT E VITR+EFDLMK++FDEQVEAL  KCEK+E  F+DG++GESPF SDI+E P P KFKT  MK YD  KDPK+YVEVFEGL++FQ
Subjt:  NSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQ

Query:  AAFDAIKCPTF
        AA DAIKC  F
Subjt:  AAFDAIKCPTF

A0A6J1DXW4 uncharacterized protein LOC1110255855.9e-3373.74Show/hide
Query:  LTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF
        +T E VITR+EFDLMK++FDEQVE L  KCEK E+PFNDGEMGESPF SD++ETP P KFK  AMKPYDG KDPK+YVEVFE L++FQAA DAIKC  F
Subjt:  LTFEGVITRKEFDLMKNKFDEQVEAL--KCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKCPTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTATCTTTTACATGCTAGTGCAGTTTGAAGTGGAAGACATGCAAGACATGTCTTTGCATGCATTTGGTCTTTATATAGGTGATGAAGATCACTTGGATAAGGC
TAATGCTTACTTGCATAAGAGAAGAAGTTATAATGGAGGTCTTCAAAGGTATAAAGAATTCCATCAGGAAGAAACGTACAATGAGATGATTCAGGCGAACCGAAGTGGGT
TCCAGTCCAGGATCCAGGGCGGGGCTGACGATCTGTTGTATAATGGTGATGATCAAGATCCACCTCTCCACTCTGATGATGATGCGTGGGGGGATGTCCTTCTTGTTCTC
GGAAGTACTCAAAACTCTGATTTCAAAGCCCAGTCCCGTTATAAGCCATTGACATTCGAAGGGGTGATCACAAGGAAGGAGTTTGATTTGATGAAGAATAAGTTTGATGA
ACAGGTCGAAGCACTTAAGTGCGAGAAGAGGGAAAACCCGTTTAATGATGGCGAGATGGGCGAATCGCCATTCATGTCGGACATTATGGAGACACCTTTTCCTACTAAGT
TTAAAACGCTTGCCATGAAGCCCTATGATGGGTTTAAGGACCCGAAGGAATACGTTGAGGTCTTCGAAGGCCTCATAAATTTTCAGGCGGCATTTGATGCTATTAAGTGC
CCAACATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCTATCTTTTACATGCTAGTGCAGTTTGAAGTGGAAGACATGCAAGACATGTCTTTGCATGCATTTGGTCTTTATATAGGTGATGAAGATCACTTGGATAAGGC
TAATGCTTACTTGCATAAGAGAAGAAGTTATAATGGAGGTCTTCAAAGGTATAAAGAATTCCATCAGGAAGAAACGTACAATGAGATGATTCAGGCGAACCGAAGTGGGT
TCCAGTCCAGGATCCAGGGCGGGGCTGACGATCTGTTGTATAATGGTGATGATCAAGATCCACCTCTCCACTCTGATGATGATGCGTGGGGGGATGTCCTTCTTGTTCTC
GGAAGTACTCAAAACTCTGATTTCAAAGCCCAGTCCCGTTATAAGCCATTGACATTCGAAGGGGTGATCACAAGGAAGGAGTTTGATTTGATGAAGAATAAGTTTGATGA
ACAGGTCGAAGCACTTAAGTGCGAGAAGAGGGAAAACCCGTTTAATGATGGCGAGATGGGCGAATCGCCATTCATGTCGGACATTATGGAGACACCTTTTCCTACTAAGT
TTAAAACGCTTGCCATGAAGCCCTATGATGGGTTTAAGGACCCGAAGGAATACGTTGAGGTCTTCGAAGGCCTCATAAATTTTCAGGCGGCATTTGATGCTATTAAGTGC
CCAACATTCTAA
Protein sequenceShow/hide protein sequence
MTPIFYMLVQFEVEDMQDMSLHAFGLYIGDEDHLDKANAYLHKRRSYNGGLQRYKEFHQEETYNEMIQANRSGFQSRIQGGADDLLYNGDDQDPPLHSDDDAWGDVLLVL
GSTQNSDFKAQSRYKPLTFEGVITRKEFDLMKNKFDEQVEALKCEKRENPFNDGEMGESPFMSDIMETPFPTKFKTLAMKPYDGFKDPKEYVEVFEGLINFQAAFDAIKC
PTF