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Moc05g17190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g17190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:12814623..12815366
RNA-Seq ExpressionMoc05g17190
SyntenyMoc05g17190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137317.1 uncharacterized protein LOC111008813 [Momordica charantia]2.0e-1395.35Show/hide
Query:  MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
        +ITREEFDQLRG+LDAQVEALKAKCEQKEGPLNDGDLGESPFT
Subjt:  MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]9.4e-2751.35Show/hide
Query:  MRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------------
        MRTQM ++E+MY+EM+ AAGA SRS+NRV R D+ EQR  HLGPV++ HPE  E E +T QRGDLR                                  
Subjt:  MRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------------

Query:  -----MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
             +ITREEFDQL+ K DAQVEALKAKCE+KE   +DGDLGESPFT
Subjt:  -----MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]1.3e-2340.38Show/hide
Query:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM
        MVQ ANSTNTADRR LAA+  HQREVG  VVEGQGH++L  EPLCRSARIT PVLPPAHP + SKA                                  
Subjt:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM

Query:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDG
               E  YN +                                                   +ITREEFDQL+ K DAQVEALKA+CE+KE   +DG
Subjt:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDG

Query:  DLGESPFT
        DLGE  F+
Subjt:  DLGESPFT

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.5e-1945.71Show/hide
Query:  MEAMRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------MIT
        MEAMRTQMR++EEMYN+M+  AGA SRS ++V   D+ EQ   H  PV+EEH   +  +   R+R                                +IT
Subjt:  MEAMRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------MIT

Query:  REEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
        REEF+QL+ K DAQVEALK +CE+KE   +DGDLGESPFT
Subjt:  REEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]3.5e-5056.16Show/hide
Query:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM
        MVQ  +STNT DRR L A+D HQREVG  VVEGQ H+ L  EP CRSARIT P L PAHP +  KA RGRGG+S++   G  PAP+ +NFDALQ+EMEAM
Subjt:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM

Query:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRI---DIRE----QRSSHL----GPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAK
        RTQM ++EEMYNEM+ A GAGSRS++R  R    D+R+    +RSS L     P       + ++E          +ITREEFDQL+ K DAQVE LKA+
Subjt:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRI---DIRE----QRSSHL----GPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAK

Query:  CEQKEGPLNDGDLGESPFT
        CE K    +DGDLGESPFT
Subjt:  CEQKEGPLNDGDLGESPFT

TrEMBL top hitse value%identityAlignment
A0A6J1C7X5 uncharacterized protein LOC1110088139.8e-1495.35Show/hide
Query:  MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
        +ITREEFDQLRG+LDAQVEALKAKCEQKEGPLNDGDLGESPFT
Subjt:  MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

A0A6J1DDW5 uncharacterized protein LOC1110196344.5e-2751.35Show/hide
Query:  MRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------------
        MRTQM ++E+MY+EM+ AAGA SRS+NRV R D+ EQR  HLGPV++ HPE  E E +T QRGDLR                                  
Subjt:  MRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------------

Query:  -----MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
             +ITREEFDQL+ K DAQVEALKAKCE+KE   +DGDLGESPFT
Subjt:  -----MITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

A0A6J1DHB3 uncharacterized protein LOC1110204796.1e-2440.38Show/hide
Query:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM
        MVQ ANSTNTADRR LAA+  HQREVG  VVEGQGH++L  EPLCRSARIT PVLPPAHP + SKA                                  
Subjt:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM

Query:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDG
               E  YN +                                                   +ITREEFDQL+ K DAQVEALKA+CE+KE   +DG
Subjt:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDG

Query:  DLGESPFT
        DLGE  F+
Subjt:  DLGESPFT

A0A6J1DPN4 uncharacterized protein LOC1110230607.0e-2045.71Show/hide
Query:  MEAMRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------MIT
        MEAMRTQMR++EEMYN+M+  AGA SRS ++V   D+ EQ   H  PV+EEH   +  +   R+R                                +IT
Subjt:  MEAMRTQMRSIEEMYNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLR----------------------------MIT

Query:  REEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT
        REEF+QL+ K DAQVEALK +CE+KE   +DGDLGESPFT
Subjt:  REEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT

A0A6J1DZJ1 uncharacterized protein LOC1110257381.7e-5056.16Show/hide
Query:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM
        MVQ  +STNT DRR L A+D HQREVG  VVEGQ H+ L  EP CRSARIT P L PAHP +  KA RGRGG+S++   G  PAP+ +NFDALQ+EMEAM
Subjt:  MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAM

Query:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRI---DIRE----QRSSHL----GPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAK
        RTQM ++EEMYNEM+ A GAGSRS++R  R    D+R+    +RSS L     P       + ++E          +ITREEFDQL+ K DAQVE LKA+
Subjt:  RTQMRSIEEMYNEMILAAGAGSRSKNRVTRI---DIRE----QRSSHL----GPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAK

Query:  CEQKEGPLNDGDLGESPFT
        CE K    +DGDLGESPFT
Subjt:  CEQKEGPLNDGDLGESPFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACGCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTTGGAACAGCAGTGGTAGAGGGGCAAGGTCACGA
CAACCTAGCAATAGAACCCCTCTGCAGGTCGGCACGAATCACCGCACCTGTTCTACCACCTGCGCACCCCGCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAAGCT
CTAAGAAGGGCGCCTGGGGTCCAGTCCCGGCTCCAACAAGTAAGAACTTTGACGCACTCCAAAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATAGAGGAAATG
TATAACGAAATGATACTAGCTGCAGGCGCAGGGTCCCGATCTAAAAATCGAGTGACGCGCATTGACATACGCGAGCAAAGGAGTTCCCACCTCGGCCCAGTCGAGGAGGA
ACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGGGGAGACCTCCGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCAAGCTCGATGCTCAGGTTG
AGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACCTGGGAGAATCGCCATTCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACGCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTTGGAACAGCAGTGGTAGAGGGGCAAGGTCACGA
CAACCTAGCAATAGAACCCCTCTGCAGGTCGGCACGAATCACCGCACCTGTTCTACCACCTGCGCACCCCGCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAAGCT
CTAAGAAGGGCGCCTGGGGTCCAGTCCCGGCTCCAACAAGTAAGAACTTTGACGCACTCCAAAGAGAAATGGAGGCAATGCGCACACAAATGCGGTCCATAGAGGAAATG
TATAACGAAATGATACTAGCTGCAGGCGCAGGGTCCCGATCTAAAAATCGAGTGACGCGCATTGACATACGCGAGCAAAGGAGTTCCCACCTCGGCCCAGTCGAGGAGGA
ACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGGGGAGACCTCCGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCAAGCTCGATGCTCAGGTTG
AGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACCTGGGAGAATCGCCATTCACCTAG
Protein sequenceShow/hide protein sequence
MVQRANSTNTADRRTLAASDAHQREVGTAVVEGQGHDNLAIEPLCRSARITAPVLPPAHPARTSKATRGRGGSSKKGAWGPVPAPTSKNFDALQREMEAMRTQMRSIEEM
YNEMILAAGAGSRSKNRVTRIDIREQRSSHLGPVEEEHPEDNESEGHTRQRGDLRMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFT