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Moc05g17460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g17460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
Genome locationchr5:12963817..12964925
RNA-Seq ExpressionMoc05g17460
SyntenyMoc05g17460
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144472.1 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia]4.2e-1490.2Show/hide
Query:  EQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELP
        EQERTT KI +ILVALNEARGEDPLEDDGN+ AAQGQLNVDGEDEDLGELP
Subjt:  EQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELP

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.3e-1281.48Show/hide
Query:  QLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRTPVHESQENGEEPP
        QLNVD EDED GELP+EVHGDE+EDEE+NDDISQ EV+VRTPVHESQ+  EEPP
Subjt:  QLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRTPVHESQENGEEPP

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]6.5e-1549.21Show/hide
Query:  VSGDSEHVTEPLEHSDSTTVEIQCQIAPGTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEY
        VSGDSEH  EPLEHSDS TV+I+CQIAP TIM ETPP+TLQE          +LVALNEARGEDPL+DDGNS   Q       ++++    P +VH +  
Subjt:  VSGDSEHVTEPLEHSDSTTVEIQCQIAPGTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEY

Query:  EDEEENDDISQNEVRVRTPVHESQEN
          EE +   SQ++    + ++ S  N
Subjt:  EDEEENDDISQNEVRVRTPVHESQEN

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]2.3e-2847.2Show/hide
Query:  MEGSSSSNPHNKENEKKRVLWPPP----------TKSG---------------------------QERVSGDSEHV---TEPLEHSDSTTVEIQCQIAP-
        MEGSS S P +KENEKK+V+ PPP           + G                            ER++  +E V    +  E  D     I  +IA  
Subjt:  MEGSSSSNPHNKENEKKRVLWPPP----------TKSG---------------------------QERVSGDSEHV---TEPLEHSDSTTVEIQCQIAP-

Query:  ----------GTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRT
                     M E     L EQERTT KITKILVALNEA GEDPLEDDGNS+ AQG+LNVDGEDEDLG+LP+EVHGDE E+EEENDDISQ EVR+  
Subjt:  ----------GTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRT

Query:  PVHESQENGEEPPV
         VHESQ +  E P+
Subjt:  PVHESQENGEEPPV

TrEMBL top hitse value%identityAlignment
A0A6J1CTS8 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like2.0e-1490.2Show/hide
Query:  EQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELP
        EQERTT KI +ILVALNEARGEDPLEDDGN+ AAQGQLNVDGEDEDLGELP
Subjt:  EQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELP

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220076.5e-1381.48Show/hide
Query:  QLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRTPVHESQENGEEPP
        QLNVD EDED GELP+EVHGDE+EDEE+NDDISQ EV+VRTPVHESQ+  EEPP
Subjt:  QLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRTPVHESQENGEEPP

A0A6J1DRR9 uncharacterized protein LOC1110237613.1e-1549.21Show/hide
Query:  VSGDSEHVTEPLEHSDSTTVEIQCQIAPGTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEY
        VSGDSEH  EPLEHSDS TV+I+CQIAP TIM ETPP+TLQE          +LVALNEARGEDPL+DDGNS   Q       ++++    P +VH +  
Subjt:  VSGDSEHVTEPLEHSDSTTVEIQCQIAPGTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEY

Query:  EDEEENDDISQNEVRVRTPVHESQEN
          EE +   SQ++    + ++ S  N
Subjt:  EDEEENDDISQNEVRVRTPVHESQEN

A0A6J1DW79 uncharacterized protein LOC1110249641.1e-2847.2Show/hide
Query:  MEGSSSSNPHNKENEKKRVLWPPP----------TKSG---------------------------QERVSGDSEHV---TEPLEHSDSTTVEIQCQIAP-
        MEGSS S P +KENEKK+V+ PPP           + G                            ER++  +E V    +  E  D     I  +IA  
Subjt:  MEGSSSSNPHNKENEKKRVLWPPP----------TKSG---------------------------QERVSGDSEHV---TEPLEHSDSTTVEIQCQIAP-

Query:  ----------GTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRT
                     M E     L EQERTT KITKILVALNEA GEDPLEDDGNS+ AQG+LNVDGEDEDLG+LP+EVHGDE E+EEENDDISQ EVR+  
Subjt:  ----------GTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKAAQGQLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRT

Query:  PVHESQENGEEPPV
         VHESQ +  E P+
Subjt:  PVHESQENGEEPPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTCATCTTCCTCTAATCCACATAACAAAGAGAATGAGAAGAAGCGAGTGTTATGGCCTCCACCAACCAAATCAGGTCAAGAACGGGTTAGTGGAGAC
TCAGAACACGTCACGGAGCCCTTGGAGCACTCAGATTCGACCACGGTCGAAATTCAATGCCAAATTGCGCCTGGTACAATTATGGATGAGACTCCACCGTCCACT
CTACAAGAACAGGAAAGGACAACGCTGAAAATTACCAAAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTGGAGGATGATGGAAACAGTAAGGCT
GCACAAGGACAATTGAATGTTGATGGAGAGGATGAAGATCTCGGAGAACTACCCGAAGAAGTGCATGGAGATGAGTATGAAGACGAAGAAGAAAATGACGATATC
TCTCAAAATGAAGTGAGAGTACGAACTCCGGTGCACGAATCTCAGGAAAATGGCGAGGAGCCCCCTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTCATCTTCCTCTAATCCACATAACAAAGAGAATGAGAAGAAGCGAGTGTTATGGCCTCCACCAACCAAATCAGGTCAAGAACGGGTTAGTGGAGAC
TCAGAACACGTCACGGAGCCCTTGGAGCACTCAGATTCGACCACGGTCGAAATTCAATGCCAAATTGCGCCTGGTACAATTATGGATGAGACTCCACCGTCCACT
CTACAAGAACAGGAAAGGACAACGCTGAAAATTACCAAAATTTTGGTGGCGTTGAATGAAGCAAGGGGAGAAGATCCATTGGAGGATGATGGAAACAGTAAGGCT
GCACAAGGACAATTGAATGTTGATGGAGAGGATGAAGATCTCGGAGAACTACCCGAAGAAGTGCATGGAGATGAGTATGAAGACGAAGAAGAAAATGACGATATC
TCTCAAAATGAAGTGAGAGTACGAACTCCGGTGCACGAATCTCAGGAAAATGGCGAGGAGCCCCCTGTATAA
Protein sequenceShow/hide protein sequence
MEGSSSSNPHNKENEKKRVLWPPPTKSGQERVSGDSEHVTEPLEHSDSTTVEIQCQIAPGTIMDETPPSTLQEQERTTLKITKILVALNEARGEDPLEDDGNSKA
AQGQLNVDGEDEDLGELPEEVHGDEYEDEEENDDISQNEVRVRTPVHESQENGEEPPV