; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g17560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g17560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:13002490..13005282
RNA-Seq ExpressionMoc05g17560
SyntenyMoc05g17560
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143608.1 uncharacterized protein LOC111013464 [Momordica charantia]4.2e-4091.4Show/hide
Query:  FPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTD
        +  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQN QPYVPPTQQYIPP QQQYNQRT+TP VQ+NNSNLENMMKEYMARTD
Subjt:  FPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTD

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]1.3e-7841.82Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSIADIPPRDPVDPPVVNG------------------------------
        MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLE QKEREGEISPESEVESTSTS+ADIPPRDPVDPP VNG                              
Subjt:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSIADIPPRDPVDPPVVNG------------------------------

Query:  --------------------------------------------QHQRSKIQL-------------------------------------EFWLW-----
                                                     H +S IQ+                                         W     
Subjt:  --------------------------------------------QHQRSKIQL-------------------------------------EFWLW-----

Query:  -----------HCDLDAK----RDGYNEP--EA-ERDGVGNKKSISHADTTCAV------GLLHSCPCFPRHGNNRNF----------------------
                   H D+  +    R    EP  EA ER     +K  +H    C        GL H       +  N  F                      
Subjt:  -----------HCDLDAK----RDGYNEP--EA-ERDGVGNKKSISHADTTCAV------GLLHSCPCFPRHGNNRNF----------------------

Query:  ---------------------------------------------NPYSNTYNP------------------GWRHHPNFSWGGQGGSSGFNQGQSQQNN
                                                     NP +    P                   WRHHPNFSWGGQGGSSGFNQGQSQQN 
Subjt:  ---------------------------------------------NPYSNTYNP------------------GWRHHPNFSWGGQGGSSGFNQGQSQQNN

Query:  QPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGN
        QPYVPPTQQ+IPPPQQQYNQRTQTPP+Q+NNSNLENMMKEYMARTDA                        NRPQGSFPGHTELP+REGKEQCKAVTL +
Subjt:  QPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGN

Query:  GLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQ
        GL YD PTMPTTDVQI ST+PTVK+PEN TTPEKENIRKGN+DT SVPPQ
Subjt:  GLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQ

XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]5.3e-7575.63Show/hide
Query:  KKSISHADTTCAVGLLHSCPCFPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNS
        KKSISHADTTCAVGLLHSCPC PR GNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQN Q YVP TQQY PPPQQ YNQR QTPPVQ+NNS
Subjt:  KKSISHADTTCAVGLLHSCPCFPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNS

Query:  NLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENL
        NLEN MKEYMARTDA                        NRPQGSF GHTELPK EGKE CKAVTL +GL Y+ PTMPTTDVQI STEPT+  P  L
Subjt:  NLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENL

XP_022159235.1 uncharacterized protein LOC111025653 [Momordica charantia]1.0e-3835.62Show/hide
Query:  ADTTC-AVGLLH---SCPCFPR------HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVP---PTQQYIPPPQQQYN-QRTQT
        A++TC   G LH   +CP  P         N + FNPYSNTYNPGW+ HPNFSW GQG S+    G +QQ  + Y P   P     PP   QYN Q+   
Subjt:  ADTTC-AVGLLH---SCPCFPR------HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVP---PTQQYIPPPQQQYN-QRTQT

Query:  PPVQHNNSNLENMMKE----------------------------YMARTDA-----------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLA
         P Q N SN+E +MKE                            YM R D                   RPQGS P  TE P+R GKE C ++   +GL 
Subjt:  PPVQHNNSNLENMMKE----------------------------YMARTDA-----------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLA

Query:  YDEPTMPTTD---------------------------VQISSTEPTVKVPENLTTPEKEN--------IRKGNEDTPSVP--PQMPNYAKFLKDIVSMKK
        Y+ P MP                               Q+S++ P    P+ L    ++N        +++ + + P V    QMP YAKF+KDI++ KK
Subjt:  YDEPTMPTTD---------------------------VQISSTEPTVKVPENLTTPEKEN--------IRKGNEDTPSVP--PQMPNYAKFLKDIVSMKK

Query:  KIGEHELVAMTKCSSEAVGSPLPMKCNDPGSFTIPCSIGGKNLG-DFEECSAITNLNPI-MFDEF
        K+GE+E VA+T+CSS    S +P K  DPGSFTIPC IGGK++G    +  A  NL P+ +F +F
Subjt:  KIGEHELVAMTKCSSEAVGSPLPMKCNDPGSFTIPCSIGGKNLG-DFEECSAITNLNPI-MFDEF

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]6.0e-7980Show/hide
Query:  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA---------
        HGNNRNFNPYSNTYNPGWRHHPNFSW GQGGS GFNQGQSQQN QPYVPPTQQYIPPPQQ+YNQRTQTPPVQ+NNSNLENMMKEYMARTDA         
Subjt:  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA---------

Query:  ---------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQM
                       NRPQGSFP HTELPKREGKEQCKAVTL +GLAYDEPTMPT DVQI ST PTVK+PEN TTPEK NIRKGNEDTPSVPPQ+
Subjt:  ---------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQM

TrEMBL top hitse value%identityAlignment
A0A6J1CR45 uncharacterized protein LOC1110134642.0e-4091.4Show/hide
Query:  FPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTD
        +  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQN QPYVPPTQQYIPP QQQYNQRT+TP VQ+NNSNLENMMKEYMARTD
Subjt:  FPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTD

A0A6J1DW02 uncharacterized protein LOC1110248976.5e-7941.82Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSIADIPPRDPVDPPVVNG------------------------------
        MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLE QKEREGEISPESEVESTSTS+ADIPPRDPVDPP VNG                              
Subjt:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSIADIPPRDPVDPPVVNG------------------------------

Query:  --------------------------------------------QHQRSKIQL-------------------------------------EFWLW-----
                                                     H +S IQ+                                         W     
Subjt:  --------------------------------------------QHQRSKIQL-------------------------------------EFWLW-----

Query:  -----------HCDLDAK----RDGYNEP--EA-ERDGVGNKKSISHADTTCAV------GLLHSCPCFPRHGNNRNF----------------------
                   H D+  +    R    EP  EA ER     +K  +H    C        GL H       +  N  F                      
Subjt:  -----------HCDLDAK----RDGYNEP--EA-ERDGVGNKKSISHADTTCAV------GLLHSCPCFPRHGNNRNF----------------------

Query:  ---------------------------------------------NPYSNTYNP------------------GWRHHPNFSWGGQGGSSGFNQGQSQQNN
                                                     NP +    P                   WRHHPNFSWGGQGGSSGFNQGQSQQN 
Subjt:  ---------------------------------------------NPYSNTYNP------------------GWRHHPNFSWGGQGGSSGFNQGQSQQNN

Query:  QPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGN
        QPYVPPTQQ+IPPPQQQYNQRTQTPP+Q+NNSNLENMMKEYMARTDA                        NRPQGSFPGHTELP+REGKEQCKAVTL +
Subjt:  QPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGN

Query:  GLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQ
        GL YD PTMPTTDVQI ST+PTVK+PEN TTPEKENIRKGN+DT SVPPQ
Subjt:  GLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQ

A0A6J1DY39 uncharacterized protein LOC1110256535.0e-3935.62Show/hide
Query:  ADTTC-AVGLLH---SCPCFPR------HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVP---PTQQYIPPPQQQYN-QRTQT
        A++TC   G LH   +CP  P         N + FNPYSNTYNPGW+ HPNFSW GQG S+    G +QQ  + Y P   P     PP   QYN Q+   
Subjt:  ADTTC-AVGLLH---SCPCFPR------HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVP---PTQQYIPPPQQQYN-QRTQT

Query:  PPVQHNNSNLENMMKE----------------------------YMARTDA-----------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLA
         P Q N SN+E +MKE                            YM R D                   RPQGS P  TE P+R GKE C ++   +GL 
Subjt:  PPVQHNNSNLENMMKE----------------------------YMARTDA-----------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLA

Query:  YDEPTMPTTD---------------------------VQISSTEPTVKVPENLTTPEKEN--------IRKGNEDTPSVP--PQMPNYAKFLKDIVSMKK
        Y+ P MP                               Q+S++ P    P+ L    ++N        +++ + + P V    QMP YAKF+KDI++ KK
Subjt:  YDEPTMPTTD---------------------------VQISSTEPTVKVPENLTTPEKEN--------IRKGNEDTPSVP--PQMPNYAKFLKDIVSMKK

Query:  KIGEHELVAMTKCSSEAVGSPLPMKCNDPGSFTIPCSIGGKNLG-DFEECSAITNLNPI-MFDEF
        K+GE+E VA+T+CSS    S +P K  DPGSFTIPC IGGK++G    +  A  NL P+ +F +F
Subjt:  KIGEHELVAMTKCSSEAVGSPLPMKCNDPGSFTIPCSIGGKNLG-DFEECSAITNLNPI-MFDEF

A0A6J1DYG0 uncharacterized protein LOC1110257642.9e-7980Show/hide
Query:  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA---------
        HGNNRNFNPYSNTYNPGWRHHPNFSW GQGGS GFNQGQSQQN QPYVPPTQQYIPPPQQ+YNQRTQTPPVQ+NNSNLENMMKEYMARTDA         
Subjt:  HGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLENMMKEYMARTDA---------

Query:  ---------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQM
                       NRPQGSFP HTELPKREGKEQCKAVTL +GLAYDEPTMPT DVQI ST PTVK+PEN TTPEK NIRKGNEDTPSVPPQ+
Subjt:  ---------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQM

A0A6J1E110 uncharacterized protein LOC1110254241.5e-7576.14Show/hide
Query:  KKSISHADTTCAVGLLHSCPCFPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNS
        KKSISHADTTCAVGLLHSCPC PR GNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQN Q YVP TQQY PPPQQ YNQR QTPPVQ+NNS
Subjt:  KKSISHADTTCAVGLLHSCPCFPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNS

Query:  NLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENL
        NLEN MKEYMARTDA                        NRPQGSF GHTELPK EGKE CKAVTL +GL YD PTMPTTDVQI STEPT+  P  L
Subjt:  NLENMMKEYMARTDA------------------------NRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGAAAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAA
GAGAGAGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATCGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGTTGTTAACGGG
CAGCACCAAAGAAGCAAGATCCAGCTGGAGTTTTGGCTCTGGCATTGCGACCTCGATGCAAAAAGAGATGGTTACAATGAACCAGAGGCTGAAAGAGATGGCGTT
GGGAATAAAAAATCCATTAGCCACGCCGATACAACCTGTGCAGTCGGATTATTGCACTCCTGCCCGTGTTTTCCAAGACATGGGAACAATAGGAACTTTAACCCA
TATTCCAACACCTACAACCCAGGTTGGAGGCACCACCCTAATTTCTCATGGGGAGGTCAAGGAGGTTCGAGCGGTTTTAATCAAGGGCAGAGCCAGCAGAACAAT
CAGCCCTATGTTCCACCTACACAGCAATACATCCCGCCACCGCAACAGCAGTACAATCAGAGAACACAGACTCCACCAGTTCAACATAATAACTCAAATCTTGAG
AATATGATGAAGGAGTACATGGCTCGAACCGACGCAAATAGACCACAAGGTTCTTTTCCAGGCCATACTGAATTACCAAAACGAGAAGGGAAAGAACAATGCAAA
GCTGTCACCCTCGGGAATGGACTGGCATATGATGAACCAACAATGCCAACAACAGATGTACAGATTTCGTCCACTGAACCAACTGTAAAGGTACCAGAGAATCTA
ACAACACCAGAAAAAGAAAATATTAGAAAAGGTAATGAGGACACCCCGAGTGTTCCTCCACAGATGCCAAATTATGCTAAGTTTTTGAAAGATATAGTTTCTATG
AAGAAAAAGATAGGAGAGCATGAACTGGTAGCCATGACAAAATGTAGTAGTGAAGCTGTAGGCAGCCCGCTACCTATGAAATGTAACGATCCTGGCAGTTTTACC
ATTCCATGTTCCATAGGAGGGAAAAACTTAGGAGACTTTGAAGAGTGCTCTGCTATAACTAACTTGAATCCTATTATGTTTGATGAGTTTTATGACTTGTTAGTT
ACAGAGATTGAAGAAGAGCTTGATAAGATAGCAGAAGGACCGGAAGATGTGACTAATCCTATTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCC
ATAGTGGAACCACCCACTTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGCATTTTGGAGAAGCACAAAAAGGCCATTGGATGGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGAAAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAA
GAGAGAGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATCGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGTTGTTAACGGG
CAGCACCAAAGAAGCAAGATCCAGCTGGAGTTTTGGCTCTGGCATTGCGACCTCGATGCAAAAAGAGATGGTTACAATGAACCAGAGGCTGAAAGAGATGGCGTT
GGGAATAAAAAATCCATTAGCCACGCCGATACAACCTGTGCAGTCGGATTATTGCACTCCTGCCCGTGTTTTCCAAGACATGGGAACAATAGGAACTTTAACCCA
TATTCCAACACCTACAACCCAGGTTGGAGGCACCACCCTAATTTCTCATGGGGAGGTCAAGGAGGTTCGAGCGGTTTTAATCAAGGGCAGAGCCAGCAGAACAAT
CAGCCCTATGTTCCACCTACACAGCAATACATCCCGCCACCGCAACAGCAGTACAATCAGAGAACACAGACTCCACCAGTTCAACATAATAACTCAAATCTTGAG
AATATGATGAAGGAGTACATGGCTCGAACCGACGCAAATAGACCACAAGGTTCTTTTCCAGGCCATACTGAATTACCAAAACGAGAAGGGAAAGAACAATGCAAA
GCTGTCACCCTCGGGAATGGACTGGCATATGATGAACCAACAATGCCAACAACAGATGTACAGATTTCGTCCACTGAACCAACTGTAAAGGTACCAGAGAATCTA
ACAACACCAGAAAAAGAAAATATTAGAAAAGGTAATGAGGACACCCCGAGTGTTCCTCCACAGATGCCAAATTATGCTAAGTTTTTGAAAGATATAGTTTCTATG
AAGAAAAAGATAGGAGAGCATGAACTGGTAGCCATGACAAAATGTAGTAGTGAAGCTGTAGGCAGCCCGCTACCTATGAAATGTAACGATCCTGGCAGTTTTACC
ATTCCATGTTCCATAGGAGGGAAAAACTTAGGAGACTTTGAAGAGTGCTCTGCTATAACTAACTTGAATCCTATTATGTTTGATGAGTTTTATGACTTGTTAGTT
ACAGAGATTGAAGAAGAGCTTGATAAGATAGCAGAAGGACCGGAAGATGTGACTAATCCTATTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCC
ATAGTGGAACCACCCACTTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGCATTTTGGAGAAGCACAAAAAGGCCATTGGATGGACGATAG
Protein sequenceShow/hide protein sequence
MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSIADIPPRDPVDPPVVNGQHQRSKIQLEFWLWHCDLDAKRDGYNEPEAERDGV
GNKKSISHADTTCAVGLLHSCPCFPRHGNNRNFNPYSNTYNPGWRHHPNFSWGGQGGSSGFNQGQSQQNNQPYVPPTQQYIPPPQQQYNQRTQTPPVQHNNSNLE
NMMKEYMARTDANRPQGSFPGHTELPKREGKEQCKAVTLGNGLAYDEPTMPTTDVQISSTEPTVKVPENLTTPEKENIRKGNEDTPSVPPQMPNYAKFLKDIVSM
KKKIGEHELVAMTKCSSEAVGSPLPMKCNDPGSFTIPCSIGGKNLGDFEECSAITNLNPIMFDEFYDLLVTEIEEELDKIAEGPEDVTNPIEKIQKEECKSLLPS
IVEPPTLEQKPLPSHLKYAFWRSTKRPLDGR