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Moc05g17580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g17580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr5:13016497..13017313
RNA-Seq ExpressionMoc05g17580
SyntenyMoc05g17580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012830525.1 PREDICTED: uncharacterized protein LOC105951621, partial [Erythranthe guttata]2.3e-1731.08Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIG------------------------GKNL-----------------
        MP++ KFLKD+V +K+  GEHE++A+T+  S  +  P+P K  DPG FTI  +IG                        G+ +                 
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIG------------------------GKNL-----------------

Query:  -----DAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEEL--------NKIAEGL--EDVINPVEKIQKEECKSLL-------PSIVEPPTLEQKPL
               MK P++ +EC + + L+ + FD    L+   +E  L         ++ E L   D   P+ + + E  ++ +       PS++EPP LE K L
Subjt:  -----DAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEEL--------NKIAEGL--EDVINPVEKIQKEECKSLL-------PSIVEPPTLEQKPL

Query:  PSHLKYVYLGDNDTLPVIIASN
        PSHLKY+YLG ++TLPVII+S+
Subjt:  PSHLKYVYLGDNDTLPVIIASN

XP_022147177.1 uncharacterized protein LOC111016189 [Momordica charantia]3.0e-1779.66Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL
        M NYAKFLKDIV  KK +GEHE+VAMTKCSSEAVGSPLP++  DPGSFTI C IGGKNL
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL

XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]3.4e-3767.91Show/hide
Query:  MTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEELNKIAEGLEDVINPVEKIQKEECKSLLPS
        MTKCSS AVGSPLPMK NDPGSFTI  SIGGKNL                                EIEEEL+KIAEG EDV +PVEKIQKEECKSLLPS
Subjt:  MTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEELNKIAEGLEDVINPVEKIQKEECKSLLPS

Query:  IVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN
        IVEPPTLEQKPLPSHLKY YLGDNDTLPVI+ SN
Subjt:  IVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN

XP_022155996.1 uncharacterized protein LOC111022971 [Momordica charantia]2.5e-1984.75Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL
        MPNYAKFLKDIV RKK +GEHE+VAMTKCSSEAVGSPLP+K  DP SFTI CSIGGKNL
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL

XP_030483376.1 uncharacterized protein LOC115699972 [Cannabis sativa]2.4e-2235.22Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLD----------------------------------------
        MPNY KFLKDI+ +K+ +GE E VA+T+  S  + S +P K  DPGSFTI CSIGG+++                                         
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLD----------------------------------------

Query:  -----------AMKLPRDFEECSSINSLNPVMFDEF-------------YDLLVTEIEEELNKIA--EGLEDVIN---PVEKIQKEEC--KSLLPSIVEP
                    ++L   F + + I+ ++ ++ ++F             +D L    E+E N++A  E L+ + N   P E ++ +E   K   PSI EP
Subjt:  -----------AMKLPRDFEECSSINSLNPVMFDEF-------------YDLLVTEIEEELNKIA--EGLEDVIN---PVEKIQKEEC--KSLLPSIVEP

Query:  PTLEQKPLPSHLKYVYLGDNDTLPVIIASN
        P LE KPLPSHLKY YLG+NDTLPVIIASN
Subjt:  PTLEQKPLPSHLKYVYLGDNDTLPVIIASN

TrEMBL top hitse value%identityAlignment
A0A5D3BM69 Uncharacterized protein2.1e-1636.67Show/hide
Query:  KFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIG----GKNLDAMK-----LPRDFEECSSINSLNP---------VMFDEFYD
        KFLKDI+ +K+ I + + VA+T+ ++    + +P K  DPGSFTI  SIG    G+ L  ++     LP    +   I  + P         ++ + +Y+
Subjt:  KFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIG----GKNLDAMK-----LPRDFEECSSINSLNP---------VMFDEFYD

Query:  LLVTEIEEELNKIAEGLEDV--------INPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN
        L  TE   E ++    LE+V          P++   K+E K + PSI EP  LE KPLP+HLKY YLG+NDTLP+II+++
Subjt:  LLVTEIEEELNKIAEGLEDV--------INPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN

A0A6J1D1N1 uncharacterized protein LOC1110161891.5e-1779.66Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL
        M NYAKFLKDIV  KK +GEHE+VAMTKCSSEAVGSPLP++  DPGSFTI C IGGKNL
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195152.2e-3767.91Show/hide
Query:  MTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEELNKIAEGLEDVINPVEKIQKEECKSLLPS
        MTKCSS AVGSPLPMK NDPGSFTI  SIGGKNL                                EIEEEL+KIAEG EDV +PVEKIQKEECKSLLPS
Subjt:  MTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEELNKIAEGLEDVINPVEKIQKEECKSLLPS

Query:  IVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN
        IVEPPTLEQKPLPSHLKY YLGDNDTLPVI+ SN
Subjt:  IVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN

A0A6J1DQL0 uncharacterized protein LOC1110234232.5e-1757.61Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTE
        M NYA FLKDIV +KK +GEHE+VAM KC SEAVGSPLP+K  DPGSFTI CSIGGKNL           C    S+N V    F +L + E
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTE

A0A6J1DTH7 uncharacterized protein LOC1110229711.2e-1984.75Show/hide
Query:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL
        MPNYAKFLKDIV RKK +GEHE+VAMTKCSSEAVGSPLP+K  DP SFTI CSIGGKNL
Subjt:  MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATTATGCTAAGTTTTTGAAAGATATAGTTTATAGGAAGAAAATGATAGGAGAGCATGAACTGGTAGCCATGACAAAATGTAGTAGTGAAGCTGTAGGCAGCCC
GCTACCCATGAAACGTAACGATCCTGGCAGTTTTACCATTGCATGTTCCATAGGAGGAAAAAACTTAGACGCCATGAAATTACCAAGAGACTTTGAAGAATGCTCTTCTA
TAAATAGCTTGAATCCTGTTATGTTTGATGAGTTTTATGACTTGTTAGTTACAGAGATTGAAGAAGAGCTTAATAAGATAGCAGAAGGACTGGAAGATGTGATTAATCCT
GTTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCCATAGTGGAACCACCCACGTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGTGTATCTAGG
GGATAACGACACTTTACCAGTTATTATAGCCTCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATTATGCTAAGTTTTTGAAAGATATAGTTTATAGGAAGAAAATGATAGGAGAGCATGAACTGGTAGCCATGACAAAATGTAGTAGTGAAGCTGTAGGCAGCCC
GCTACCCATGAAACGTAACGATCCTGGCAGTTTTACCATTGCATGTTCCATAGGAGGAAAAAACTTAGACGCCATGAAATTACCAAGAGACTTTGAAGAATGCTCTTCTA
TAAATAGCTTGAATCCTGTTATGTTTGATGAGTTTTATGACTTGTTAGTTACAGAGATTGAAGAAGAGCTTAATAAGATAGCAGAAGGACTGGAAGATGTGATTAATCCT
GTTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCCATAGTGGAACCACCCACGTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGTGTATCTAGG
GGATAACGACACTTTACCAGTTATTATAGCCTCCAATTAA
Protein sequenceShow/hide protein sequence
MPNYAKFLKDIVYRKKMIGEHELVAMTKCSSEAVGSPLPMKRNDPGSFTIACSIGGKNLDAMKLPRDFEECSSINSLNPVMFDEFYDLLVTEIEEELNKIAEGLEDVINP
VEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYVYLGDNDTLPVIIASN