| GenBank top hits | e value | %identity | Alignment |
|---|
| KYP41105.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 2.0e-113 | 54.5 | Show/hide |
Query: LNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEENPNKVEIEKGEYP------------------------------------------------LTK
LN NFK WKE ++I++GCMDLD+A RV++P+ T EN ++ ++EK E K
Subjt: LNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEENPNKVEIEKGEYP------------------------------------------------LTK
Query: LTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREKTRKCSHGFYLKE---F
L S+RY GKGNIR+YIM+MSN+A KLKALKLE+S+D L+HL L SLP ++ F+VSYNTQKDKW+LNELISH VQEEER QREKT +L+E
Subjt: LTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREKTRKCSHGFYLKE---F
Query: TQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRT
QY M GKPSMNG +ERRNRTLKDMVRSMI++SSLPESL GEALK AVYILNRVPSKA NKTPY+LWT KRPSL++LHIWGCPAE RPYRP+E KL++RT
Subjt: TQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRT
Query: ISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTSLYP
+SCYFVGY ERSRG+KFYN T+R+F E GNARFLE++EF ++VVFEEE + V+ TI + D +P D++ +QDN P
Subjt: ISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTSLYP
Query: IDQPQHTQEVSLRRSTKERRNS
I+Q Q QEV LRRST+ER+++
Subjt: IDQPQHTQEVSLRRSTKERRNS
|
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| RVW21227.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 4.2e-87 | 40.12 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRP---SSTEENPNKVEIEK---------------------GEYP-------------
+ ++S VNNIP LN NFK WKE + IVLGCM LD ALR DRP +S + +EK G P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRP---SSTEENPNKVEIEK---------------------GEYP-------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+K S+RY GK NIREYIM+MSN+ +LKALKL++SE L+HLVL SLP ++S F+++YNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: K---------------------------------------------------------------------------------------------------
K
Subjt: K---------------------------------------------------------------------------------------------------
Query: -TRKCSHGF--YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWG
+ +C F YL E QY MLG PS NG +ER N TLKDMVRSMI++S+LPESL EA+K AVY+LNRV SKA KTPY+LWT K+PS+R+LH+WG
Subjt: -TRKCSHGF--YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWG
Query: CPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEV
CPA+ RPY+PNEKKLD+RT+SC+FVGY ERSRGFKFY+ ++R+F E+GNA+F+E++E G+ + VVFEEE+ +I + T+ S ++ D+ Q+
Subjt: CPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEV
Query: PTLDVI
P ++I
Subjt: PTLDVI
|
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| RVW61151.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.2e-88 | 38.34 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN NFK WKE + IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY GK NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNR
YL E QY M G PS NG +ERRNR
Subjt: ------------------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNR
Query: TLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNS
TLKDMVRSMI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCPAE RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+
Subjt: TLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNS
Query: TSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVS--KVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-E
++R+F E GNA+F+E++E GR + VVFEEE V +P I + ++ NDT V ++ I + PI QPQ Q +
Subjt: TSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVS--KVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-E
Query: VSLRRSTKERRNS
V LRRST+ERR++
Subjt: VSLRRSTKERRNS
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| RVW97553.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.5e-89 | 38.74 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN NFK WKE + IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY GK NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVR
YL E QY M G PS NG +ERRNRTLKDMVR
Subjt: -----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVR
Query: SMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSE
SMI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCP E RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+ ++R+F E
Subjt: SMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSE
Query: MGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-EVSLRRSTKE
GNA+F+E++E GR + VVFEEE I + TI ++ NDT V ++ I + PI QPQ Q +V LRRST+E
Subjt: MGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-EVSLRRSTKE
Query: RRNS
RR++
Subjt: RRNS
|
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| RVX07895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.2e-86 | 37.79 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN+ NFK WKE I IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY K NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRS
YL E QY M G PS NG +ERRNRT KDMVRS
Subjt: ----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRS
Query: MIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEM
MI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCPAE RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+ ++R+ E
Subjt: MIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEM
Query: GNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQD-----------EVPTLDVITSQDNNVDTSLYPIDQPQHTQ-EVSLRRST
GNA+F+E++E GR ++VVF+E+ I ++T T ++ D+ Q+ E+P V+ + + + QPQ Q +V LRRST
Subjt: GNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQD-----------EVPTLDVITSQDNNVDTSLYPIDQPQHTQ-EVSLRRST
Query: KERRNS
+ERR++
Subjt: KERRNS
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151RFD4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.8e-114 | 54.5 | Show/hide |
Query: LNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEENPNKVEIEKGEYP------------------------------------------------LTK
LN NFK WKE ++I++GCMDLD+A RV++P+ T EN ++ ++EK E K
Subjt: LNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEENPNKVEIEKGEYP------------------------------------------------LTK
Query: LTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREKTRKCSHGFYLKE---F
L S+RY GKGNIR+YIM+MSN+A KLKALKLE+S+D L+HL L SLP ++ F+VSYNTQKDKW+LNELISH VQEEER QREKT +L+E
Subjt: LTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREKTRKCSHGFYLKE---F
Query: TQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRT
QY M GKPSMNG +ERRNRTLKDMVRSMI++SSLPESL GEALK AVYILNRVPSKA NKTPY+LWT KRPSL++LHIWGCPAE RPYRP+E KL++RT
Subjt: TQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRT
Query: ISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTSLYP
+SCYFVGY ERSRG+KFYN T+R+F E GNARFLE++EF ++VVFEEE + V+ TI + D +P D++ +QDN P
Subjt: ISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTSLYP
Query: IDQPQHTQEVSLRRSTKERRNS
I+Q Q QEV LRRST+ER+++
Subjt: IDQPQHTQEVSLRRSTKERRNS
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| A0A438CDD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-87 | 40.12 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRP---SSTEENPNKVEIEK---------------------GEYP-------------
+ ++S VNNIP LN NFK WKE + IVLGCM LD ALR DRP +S + +EK G P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRP---SSTEENPNKVEIEK---------------------GEYP-------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+K S+RY GK NIREYIM+MSN+ +LKALKL++SE L+HLVL SLP ++S F+++YNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: K---------------------------------------------------------------------------------------------------
K
Subjt: K---------------------------------------------------------------------------------------------------
Query: -TRKCSHGF--YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWG
+ +C F YL E QY MLG PS NG +ER N TLKDMVRSMI++S+LPESL EA+K AVY+LNRV SKA KTPY+LWT K+PS+R+LH+WG
Subjt: -TRKCSHGF--YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWG
Query: CPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEV
CPA+ RPY+PNEKKLD+RT+SC+FVGY ERSRGFKFY+ ++R+F E+GNA+F+E++E G+ + VVFEEE+ +I + T+ S ++ D+ Q+
Subjt: CPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEV
Query: PTLDVI
P ++I
Subjt: PTLDVI
|
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| A0A438FME3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-88 | 38.34 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN NFK WKE + IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY GK NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNR
YL E QY M G PS NG +ERRNR
Subjt: ------------------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNR
Query: TLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNS
TLKDMVRSMI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCPAE RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+
Subjt: TLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNS
Query: TSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVS--KVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-E
++R+F E GNA+F+E++E GR + VVFEEE V +P I + ++ NDT V ++ I + PI QPQ Q +
Subjt: TSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVS--KVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-E
Query: VSLRRSTKERRNS
V LRRST+ERR++
Subjt: VSLRRSTKERRNS
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| A0A438ILJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-89 | 38.74 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN NFK WKE + IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY GK NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVR
YL E QY M G PS NG +ERRNRTLKDMVR
Subjt: -----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVR
Query: SMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSE
SMI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCP E RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+ ++R+F E
Subjt: SMIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSE
Query: MGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-EVSLRRSTKE
GNA+F+E++E GR + VVFEEE I + TI ++ NDT V ++ I + PI QPQ Q +V LRRST+E
Subjt: MGNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQDEVPTLDVITSQDNNVDTS-LYPI-------DQPQHTQ-EVSLRRSTKE
Query: RRNS
RR++
Subjt: RRNS
|
|
| A0A438JG16 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.0e-87 | 37.79 | Show/hide |
Query: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
++ ++S VNNIP LN+ NFK WKE I IVLGCMDLD ALR DRPS ST E + +E I K P
Subjt: NSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPS-----STEENPNKVE-----------IEKGEYP---------------------
Query: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
L+KL S+RY K NIREYIM+MSN+ +LKALKLE+SED L+HLVL SLP ++S F++SYNTQK+KW+LNELI+ CVQEEER+++E
Subjt: --------------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLEVSEDFLLHLVLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQRE
Query: KTRKC-----SHGF--------------------------------------------------------------------------------------
K S GF
Subjt: KTRKC-----SHGF--------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRS
YL E QY M G PS NG +ERRNRT KDMVRS
Subjt: ----------------------------------------------------------------YLKE---FTQYMMLGKPSMNGGSERRNRTLKDMVRS
Query: MIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEM
MI++S+LPESL GEA+K AVYILNRVPSKA KTPY+LWT K+PS+R+LH+WGCPAE RPY+PNEKKLD+RT+SCYFVGY+ERSRGFKFY+ ++R+ E
Subjt: MIAYSSLPESLCGEALKIAVYILNRVPSKAENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEM
Query: GNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQD-----------EVPTLDVITSQDNNVDTSLYPIDQPQHTQ-EVSLRRST
GNA+F+E++E GR ++VVF+E+ I ++T T ++ D+ Q+ E+P V+ + + + QPQ Q +V LRRST
Subjt: GNARFLENIEFEGRNKSKDVVFEEENATIRNDVVTLPTIVSKVVLDNDTQD-----------EVPTLDVITSQDNNVDTSLYPIDQPQHTQ-EVSLRRST
Query: KERRNS
+ERR++
Subjt: KERRNS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.0e-16 | 32.5 | Show/hide |
Query: PSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKA---ENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYF
P +NG SER RT+ + R+M++ + L +S GEA+ A Y++NR+PS+A +KTPY++W K+P L++L ++G V + + K D ++ F
Subjt: PSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKA---ENKTPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYF
Query: VGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVF-----EEENATIRND
VGY GFK +++ + F + E R + VF E EN ND
Subjt: VGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVF-----EEENATIRND
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-19 | 27.4 | Show/hide |
Query: HCVQEEERMQREKTRKCSHG--FYLKEFTQY----------MMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPS-KAENK
H + E E ++ K + +G + +EF +Y + G P NG +ER NRT+ + VRSM+ + LP+S GEA++ A Y++NR PS +
Subjt: HCVQEEERMQREKTRKCSHG--FYLKEFTQY----------MMLGKPSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPS-KAENK
Query: TPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDV
P ++WT K S +L ++GC A + KLD ++I C F+GY + G++ ++ + + F E+ + S+ V +N I N
Subjt: TPYKLWTKKRPSLRYLHIWGCPAEVRPYRPNEKKLDTRTISCYFVGYAERSRGFKFYNSTSRTFSEMGNARFLENIEFEGRNKSKDVVFEEENATIRNDV
Query: VTLPTIVSKVVLDNDTQDEVPTL----DVITSQDNNVDTSLYPIDQPQHTQE--VSLRRSTKERRNSKGSTSGYIYMMADE
VT+P+ + T DEV + Q +D + ++ P +E LRRS + R S+ S +++D+
Subjt: VTLPTIVSKVVLDNDTQDEVPTL----DVITSQDNNVDTSLYPIDQPQHTQE--VSLRRSTKERRNSKGSTSGYIYMMADE
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| P92512 Uncharacterized mitochondrial protein AtMg00710 | 1.9e-05 | 35.37 | Show/hide |
Query: NRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAEN-KTPYKLWTKKRPSLRYLHIWGCPAEVR----PYRPNEKK
NRT+ + VRSM+ LP++ +A AV+I+N+ PS A N P ++W + P+ YL +GC A + +P KK
Subjt: NRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAEN-KTPYKLWTKKRPSLRYLHIWGCPAEVR----PYRPNEKK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-08 | 29.09 | Show/hide |
Query: PSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSK-AENKTPYKLWTKKRPSLRYLHIWGCPAE--VRPYRPNEKKLDTRTISCYF
P NG SER++R + + ++++++S+P++ A +AVY++NR+P+ + ++P++ P+ L ++GC +RPY N+ KLD ++ C F
Subjt: PSMNGGSERRNRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSK-AENKTPYKLWTKKRPSLRYLHIWGCPAE--VRPYRPNEKKLDTRTISCYF
Query: VGYA-ERSRGFKFYNSTSRTFSEMGNARFLEN-IEFEGRNKSKDVVFEE--ENATIRNDVVTLPT
+GY+ +S + TSR + + RF EN F + V E+ E++ + + TLPT
Subjt: VGYA-ERSRGFKFYNSTSRTFSEMGNARFLEN-IEFEGRNKSKDVVFEE--ENATIRNDVVTLPT
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT5G53670.1 unknown protein | 3.6e-12 | 28.17 | Show/hide |
Query: LVKVANSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEE-----NPNKVEIE----------KGEYP-----------------
L V + + V++IP L+ +NF +WKE + +VL MDLD++L +RPSS +E N+V I +G P
Subjt: LVKVANSDNMSTQVNNIPRLNEANFKDWKEDIQIVLGCMDLDIALRVDRPSSTEE-----NPNKVEIE----------KGEYP-----------------
Query: -----------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLE--VSEDFLL-HLVLNSLPAEYSHFRVSYNTQKDK-------------WSLNELI
+ +S+ YI N+RE IM+M + K K L + S D +L H + LP +Y + Y+ + K WS ELI
Subjt: -----------LTKLTSLRYIGKGNIREYIMQMSNVAVKLKALKLE--VSEDFLL-HLVLNSLPAEYSHFRVSYNTQKDK-------------WSLNELI
Query: SHCVQEEERMQRE
S C EEE ++ E
Subjt: SHCVQEEERMQRE
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| AT5G53690.1 unknown protein | 6.0e-07 | 55.81 | Show/hide |
Query: VLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREK
VL+SLP++Y R +Y+ K +WS ++LISHCVQEEER+ EK
Subjt: VLNSLPAEYSHFRVSYNTQKDKWSLNELISHCVQEEERMQREK
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.3e-06 | 35.37 | Show/hide |
Query: NRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAEN-KTPYKLWTKKRPSLRYLHIWGCPAEVR----PYRPNEKK
NRT+ + VRSM+ LP++ +A AV+I+N+ PS A N P ++W + P+ YL +GC A + +P KK
Subjt: NRTLKDMVRSMIAYSSLPESLCGEALKIAVYILNRVPSKAEN-KTPYKLWTKKRPSLRYLHIWGCPAEVR----PYRPNEKK
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