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Moc05g21840 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g21840
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:15647373..15651292
RNA-Seq ExpressionMoc05g21840
SyntenyMoc05g21840
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]5.8e-1779.69Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        ++FVLQE+CPQA APNATVAV  AYDR IKA+ KAKVYILASISDVLAKKHED +T KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]1.2e-1781.25Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA APNAT+AV NAYDR IKA+ KAKVYIL+SISDVLAKKHED VT KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]1.5e-1267.19Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RF+L E CPQA  PNA  A  +AYDR IKA+ KA VYIL SISDVL+KKHE MVT +EIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]2.4e-1578.12Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA APNATVAV N YDR IKA+ KAKV ILASISDVLAKKHE+ V  KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]1.3e-1679.69Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA   NATVAV NAYDR IK++ KAKVYILASISDVLAKKHED VT KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200952.8e-1779.69Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        ++FVLQE+CPQA APNATVAV  AYDR IKA+ KAKVYILASISDVLAKKHED +T KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
A0A6J1DMS3 uncharacterized protein LOC1110220005.6e-1881.25Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA APNAT+AV NAYDR IKA+ KAKVYIL+SISDVLAKKHED VT KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
A0A6J1DW68 uncharacterized protein LOC1110246371.2e-1578.12Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA APNATVAV N YDR IKA+ KAKV ILASISDVLAKKHE+ V  KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
A0A6J1DWI4 uncharacterized protein LOC1110241457.1e-1367.19Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RF+L E CPQA  PNA  A  +AYDR IKA+ KA VYIL SISDVL+KKHE MVT +EIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
A0A6J1DWL0 uncharacterized protein LOC1110247346.2e-1779.69Show/hide
Query:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
        +RFVLQE+CPQA   NATVAV NAYDR IK++ KAKVYILASISDVLAKKHED VT KEIM+SL
Subjt:  IRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGTGGAGCCCCTTGTTCAAGTCCCAGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTA
TGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCGGGCCACTCTCACCCATACAGATCAAAGAACGAGCCCTCACGGG
CAGGAGTCCATAACTCACTCAGGATTGAGACTGAGTTGCCTGGATACCCCCACTCGCATGTCTCCACACGAACGACTTGATCGAGTCGTTTGTAACCTTTACAGA
ACGGGCCGTATCCATAGTGTTGCTAGGATAAGGTTTGTCTTGCAAGAGAATTGTCCTCAAGCTCATGCACCTAACGCCACTGTGGCAGTGCACAACGCCTATGAC
AGGTTGATCAAGGCCGACTACAAGGCCAAGGTCTACATCTTGGCAAGCATATCAGATGTGCTTGCTAAGAAGCACGAGGACATGGTCACCATAAAGGAGATTATG
AACTCGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGTGGAGCCCCTTGTTCAAGTCCCAGAGTCAGCATTTAAGGGAACACTCATCTACTCCCCTAAAGTCGGGGAGGAGTGAATTCCATCTTGTGAAGTTA
TGTTCCCAGCTCCCCACTCGGTCTCGTCCCCAAAATGGTAGGAATGTTGAGTCGGCGACTCGGGCCACTCTCACCCATACAGATCAAAGAACGAGCCCTCACGGG
CAGGAGTCCATAACTCACTCAGGATTGAGACTGAGTTGCCTGGATACCCCCACTCGCATGTCTCCACACGAACGACTTGATCGAGTCGTTTGTAACCTTTACAGA
ACGGGCCGTATCCATAGTGTTGCTAGGATAAGGTTTGTCTTGCAAGAGAATTGTCCTCAAGCTCATGCACCTAACGCCACTGTGGCAGTGCACAACGCCTATGAC
AGGTTGATCAAGGCCGACTACAAGGCCAAGGTCTACATCTTGGCAAGCATATCAGATGTGCTTGCTAAGAAGCACGAGGACATGGTCACCATAAAGGAGATTATG
AACTCGCTATAG
Protein sequenceShow/hide protein sequence
MRGWSPLFKSQSQHLREHSSTPLKSGRSEFHLVKLCSQLPTRSRPQNGRNVESATRATLTHTDQRTSPHGQESITHSGLRLSCLDTPTRMSPHERLDRVVCNLYR
TGRIHSVARIRFVLQENCPQAHAPNATVAVHNAYDRLIKADYKAKVYILASISDVLAKKHEDMVTIKEIMNSL