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Moc05g22040 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22040
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:15773589..15773898
RNA-Seq ExpressionMoc05g22040
SyntenyMoc05g22040
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154103.1 uncharacterized protein LOC111021439 [Momordica charantia]1.8e-1876.06Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL   YETDLGRTV VEIL  PS+EA EAMD D+Q QPEENW S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

XP_022155342.1 uncharacterized protein LOC111022476 [Momordica charantia]1.9e-2083.58Show/hide
Query:  ARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        ARL AAYETDL RTV VEILPEPS+EA+EAMD DEQ QPE+NW SHLIKYLRD ILP EKIEAQQLQ
Subjt:  ARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]2.3e-1877.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL A YETDLGRTV VEILPEPS+EA EAMD D Q Q EEN  S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

XP_022158579.1 uncharacterized protein LOC111025033 [Momordica charantia]1.6e-1977.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +D LARL  AYETDLGRTV VEILP PS+EA EAMD D Q QPEENW S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

XP_022159204.1 uncharacterized protein LOC111025623 [Momordica charantia]7.1e-2077.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL AAY TDLGRT+SVEIL EPS++A E MD DEQRQ EENWMSHLIKYL+D ILP E IE QQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

TrEMBL top hitse value%identityAlignment
A0A6J1DJC7 Ribonuclease H8.5e-1976.06Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL   YETDLGRTV VEIL  PS+EA EAMD D+Q QPEENW S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

A0A6J1DP30 uncharacterized protein LOC1110224769.1e-2183.58Show/hide
Query:  ARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        ARL AAYETDL RTV VEILPEPS+EA+EAMD DEQ QPE+NW SHLIKYLRD ILP EKIEAQQLQ
Subjt:  ARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

A0A6J1DVC6 Ribonuclease H1.1e-1877.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL A YETDLGRTV VEILPEPS+EA EAMD D Q Q EEN  S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

A0A6J1DZU0 Ribonuclease H7.7e-2077.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +D LARL  AYETDLGRTV VEILP PS+EA EAMD D Q QPEENW S LIKYL+D ILP EKIEAQQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

A0A6J1E1Q5 uncharacterized protein LOC1110256233.4e-2077.46Show/hide
Query:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ
        +DALARL AAY TDLGRT+SVEIL EPS++A E MD DEQRQ EENWMSHLIKYL+D ILP E IE QQLQ
Subjt:  SDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGCAAAATACCTTTCTCAGACGCGTTGGCTCGACTAACTGCAGCTTATGAAACCGACCTGGGAAGAACTGTGTCGGTCGAGATTTTGCCCGAGCCGAGCGTAGA
AGCTCATGAAGCAATGGATAGCGACGAACAAAGGCAACCAGAAGAAAACTGGATGAGCCATTTGATCAAGTATTTAAGAGACGAGATCCTGCCTAAAGAAAAGATAGAGG
CCCAACAACTACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGCAAAATACCTTTCTCAGACGCGTTGGCTCGACTAACTGCAGCTTATGAAACCGACCTGGGAAGAACTGTGTCGGTCGAGATTTTGCCCGAGCCGAGCGTAGA
AGCTCATGAAGCAATGGATAGCGACGAACAAAGGCAACCAGAAGAAAACTGGATGAGCCATTTGATCAAGTATTTAAGAGACGAGATCCTGCCTAAAGAAAAGATAGAGG
CCCAACAACTACAATGA
Protein sequenceShow/hide protein sequence
MNGKIPFSDALARLTAAYETDLGRTVSVEILPEPSVEAHEAMDSDEQRQPEENWMSHLIKYLRDEILPKEKIEAQQLQ