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Moc05g22090 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22090
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr5:15796066..15800575
RNA-Seq ExpressionMoc05g22090
SyntenyMoc05g22090
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]9.8e-2496.77Show/hide
Query:  EIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
        EIEEELDKIAEG EDVT+PVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
Subjt:  EIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP

XP_022155996.1 uncharacterized protein LOC111022971 [Momordica charantia]4.7e-1852.58Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLN
        MRN E Q+GQL+N+LK RPQGSFP H E+PKR+GKEQCKA+TLRSGL+Y+ P MP     +   +P+  I  +P+  EKE  T G+ E   A +  N
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLN

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]1.9e-3583.87Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI
        MRNF TQLG LANELKNRPQGSFPGH ELP+REGKEQCKA+TLRSGL YDGPTMPTTDVQI ST+PTVKIPENPTTPEKENI KG+ +D S++
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI

XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]1.6e-2948.26Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLNPVM
        MRNFETQLG LAN LKNRPQGSF GH ELPK EGKE CKA+TLRSGL Y+ PTMPTTDVQI STEPT                                 
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLNPVM

Query:  FDEFYDLLVTEIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
                                                    IVEPPTLEQKPLPSHLKYAYLGDN+TLP
Subjt:  FDEFYDLLVTEIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]3.6e-3483.87Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI
        MRNFETQLGQLANELKNRPQGSFP H ELPKREGKEQCKA+TLRSGLAYD PTMPT DVQI ST PTVKIPENPTTPEK NI KG+ ED  ++
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI

TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195154.7e-2496.77Show/hide
Query:  EIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
        EIEEELDKIAEG EDVT+PVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
Subjt:  EIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP

A0A6J1DTH7 uncharacterized protein LOC1110229712.3e-1852.58Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLN
        MRN E Q+GQL+N+LK RPQGSFP H E+PKR+GKEQCKA+TLRSGL+Y+ P MP     +   +P+  I  +P+  EKE  T G+ E   A +  N
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLN

A0A6J1DW02 uncharacterized protein LOC1110248979.2e-3683.87Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI
        MRNF TQLG LANELKNRPQGSFPGH ELP+REGKEQCKA+TLRSGL YDGPTMPTTDVQI ST+PTVKIPENPTTPEKENI KG+ +D S++
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI

A0A6J1DYG0 uncharacterized protein LOC1110257641.7e-3483.87Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI
        MRNFETQLGQLANELKNRPQGSFP H ELPKREGKEQCKA+TLRSGLAYD PTMPT DVQI ST PTVKIPENPTTPEK NI KG+ ED  ++
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAI

A0A6J1E110 uncharacterized protein LOC1110254242.6e-3049.42Show/hide
Query:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLNPVM
        MRNFETQLG LAN LKNRPQGSF GH ELPK EGKE CKA+TLRSGL YD PTMPTTDVQI STEPT                                 
Subjt:  MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLNPVM

Query:  FDEFYDLLVTEIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP
                                                    IVEPPTLEQKPLPSHLKYAYLGDNDTLP
Subjt:  FDEFYDLLVTEIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAATTTCGAGACCCAATTGGGACAGCTCGCCAATGAATTGAAGAATAGACCACAAGGTTCTTTTCCAGGCCATATTGAATTACCAAAACGAGAAGGGAAAGAACA
GTGCAAAGCTATCACCCTTAGGAGTGGACTGGCATATGATGGACCAACAATGCCAACAACAGATGTACAGATTTCGTCCACTGAACCAACTGTAAAGATACCAGAGAATC
CGACAACACCAGAAAAAGAAAATATTACAAAAGGAGACTTTGAAGACTGCTCTGCTATAACTAGCTTGAATCCTGTTATGTTTGATGAGTTTTATGACTTGTTAGTTACA
GAGATTGAAGAAGAGCTTGATAAGATAGCAGAAGGATCGGAAGATGTGACTAATCCTGTTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCCATTGTGGA
ACCACCCACTTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGCGTATCTAGGGGATAACGACACTTTACCAGAGCCTGGCGCCTGCCCTGTTCTTTCCAGCATTT
TGAAAAATATTAGGGAATGTTCTAGTTGTGGAAGAGAAGAATATTCGGAGAATTATCGCACATGCGCTACAAAGAAGGGAAGCTACTGGGACGTCTCCTACATCGAAGTT
CCGTCGTCTCCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGC
CTCCAATGCTAGCTGTTATCCTTGGTCATCCATCTTCCAGTACCGACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAATTTCGAGACCCAATTGGGACAGCTCGCCAATGAATTGAAGAATAGACCACAAGGTTCTTTTCCAGGCCATATTGAATTACCAAAACGAGAAGGGAAAGAACA
GTGCAAAGCTATCACCCTTAGGAGTGGACTGGCATATGATGGACCAACAATGCCAACAACAGATGTACAGATTTCGTCCACTGAACCAACTGTAAAGATACCAGAGAATC
CGACAACACCAGAAAAAGAAAATATTACAAAAGGAGACTTTGAAGACTGCTCTGCTATAACTAGCTTGAATCCTGTTATGTTTGATGAGTTTTATGACTTGTTAGTTACA
GAGATTGAAGAAGAGCTTGATAAGATAGCAGAAGGATCGGAAGATGTGACTAATCCTGTTGAAAAAATACAAAAAGAAGAATGCAAGTCGTTACTTCCGTCCATTGTGGA
ACCACCCACTTTGGAGCAGAAGCCATTGCCGTCGCATTTGAAATATGCGTATCTAGGGGATAACGACACTTTACCAGAGCCTGGCGCCTGCCCTGTTCTTTCCAGCATTT
TGAAAAATATTAGGGAATGTTCTAGTTGTGGAAGAGAAGAATATTCGGAGAATTATCGCACATGCGCTACAAAGAAGGGAAGCTACTGGGACGTCTCCTACATCGAAGTT
CCGTCGTCTCCGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAGAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGC
CTCCAATGCTAGCTGTTATCCTTGGTCATCCATCTTCCAGTACCGACACTGA
Protein sequenceShow/hide protein sequence
MRNFETQLGQLANELKNRPQGSFPGHIELPKREGKEQCKAITLRSGLAYDGPTMPTTDVQISSTEPTVKIPENPTTPEKENITKGDFEDCSAITSLNPVMFDEFYDLLVT
EIEEELDKIAEGSEDVTNPVEKIQKEECKSLLPSIVEPPTLEQKPLPSHLKYAYLGDNDTLPEPGACPVLSSILKNIRECSSCGREEYSENYRTCATKKGSYWDVSYIEV
PSSPRGEPTAARSGSRSRATYLQLEGFIGFCGFTFMASNASCYPWSSIFQYRH