; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g22100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:15803554..15804382
RNA-Seq ExpressionMoc05g22100
SyntenyMoc05g22100
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146110.1 uncharacterized protein LOC111015405 [Momordica charantia]1.7e-3874.58Show/hide
Query:  DATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPKEGKRL
        D TQVTQMAEF+VID R  YNAIF RP+IHSF  VP TLHQ LKYST NGVG V+GEQK SRECYASALKGS+ CALE+QA   + Q  E DLP+EGKR 
Subjt:  DATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPKEGKRL

Query:  FSPPTEELELVPLLTSEK
        FS PTEELELVPLL+SEK
Subjt:  FSPPTEELELVPLLTSEK

XP_022154405.1 uncharacterized protein LOC111021682 [Momordica charantia]1.2e-3978.05Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  D TQVTQMAEF+VID RS YNAIFGRPIIHSFRVVPST+HQVLKYST NGVG V+GEQKT RECYASALKGS+VCAL  QAN  +L  SE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
         GKR FS PTEELELV LL+ E+
Subjt:  EGKRLFSPPTEELELVPLLTSEK

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]2.2e-4682.11Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  DATQVTQMAEF+VIDD+S YNAIFGRPIIHSF  V STLHQVLKYST+NGVG V+GEQKTSR+CYAS LKG AVC LEEQ NRGKLQGSE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
        + KR FSPPTEELELVPLL+ EK
Subjt:  EGKRLFSPPTEELELVPLLTSEK

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]8.9e-6497.04Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPTVNGNMRDHARNDEFNHIQMADNRDVAMREYAAT
        MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLE QKEREGEISPESEVESTSTSMADIPPRDPVDPP VNGNMRDHARNDEFN+IQMADNRDVAMREYAAT
Subjt:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPTVNGNMRDHARNDEFNHIQMADNRDVAMREYAAT

Query:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQTIGHF
        AFQNFDSGIVNPIPAH NFELKPMMFQMLQTIGHF
Subjt:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQTIGHF

XP_022158414.1 uncharacterized protein LOC111024904 [Momordica charantia]1.1e-4886.18Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  DATQVTQMAEF+VID RS YNAIFGRPIIHSFR VPSTLHQVLKYST N VGMV+GEQKTSRECYASALKGSAVCALEEQ NRGKLQ SE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
        EGKR F PPTEELELVPLL+ E+
Subjt:  EGKRLFSPPTEELELVPLLTSEK

TrEMBL top hitse value%identityAlignment
A0A6J1CWD0 uncharacterized protein LOC1110154058.2e-3974.58Show/hide
Query:  DATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPKEGKRL
        D TQVTQMAEF+VID R  YNAIF RP+IHSF  VP TLHQ LKYST NGVG V+GEQK SRECYASALKGS+ CALE+QA   + Q  E DLP+EGKR 
Subjt:  DATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPKEGKRL

Query:  FSPPTEELELVPLLTSEK
        FS PTEELELVPLL+SEK
Subjt:  FSPPTEELELVPLLTSEK

A0A6J1DJI4 uncharacterized protein LOC1110216825.7e-4078.05Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  D TQVTQMAEF+VID RS YNAIFGRPIIHSFRVVPST+HQVLKYST NGVG V+GEQKT RECYASALKGS+VCAL  QAN  +L  SE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
         GKR FS PTEELELV LL+ E+
Subjt:  EGKRLFSPPTEELELVPLLTSEK

A0A6J1DPX9 uncharacterized protein LOC1110220061.1e-4682.11Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  DATQVTQMAEF+VIDD+S YNAIFGRPIIHSF  V STLHQVLKYST+NGVG V+GEQKTSR+CYAS LKG AVC LEEQ NRGKLQGSE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
        + KR FSPPTEELELVPLL+ EK
Subjt:  EGKRLFSPPTEELELVPLLTSEK

A0A6J1DW02 uncharacterized protein LOC1110248974.3e-6497.04Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPTVNGNMRDHARNDEFNHIQMADNRDVAMREYAAT
        MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLE QKEREGEISPESEVESTSTSMADIPPRDPVDPP VNGNMRDHARNDEFN+IQMADNRDVAMREYAAT
Subjt:  MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPTVNGNMRDHARNDEFNHIQMADNRDVAMREYAAT

Query:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQTIGHF
        AFQNFDSGIVNPIPAH NFELKPMMFQMLQTIGHF
Subjt:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQTIGHF

A0A6J1DZB9 uncharacterized protein LOC1110249045.1e-4986.18Show/hide
Query:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK
        TIG  DATQVTQMAEF+VID RS YNAIFGRPIIHSFR VPSTLHQVLKYST N VGMV+GEQKTSRECYASALKGSAVCALEEQ NRGKLQ SE DLPK
Subjt:  TIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGKLQGSETDLPK

Query:  EGKRLFSPPTEELELVPLLTSEK
        EGKR F PPTEELELVPLL+ E+
Subjt:  EGKRLFSPPTEELELVPLLTSEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGAAAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAAGAAAG
AGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATGGCGGATATTCCACCTCGTGATCCGGTTGATCCACCTACTGTAAATGGTAATATGAGGG
ATCATGCAAGAAATGATGAATTCAACCATATCCAGATGGCGGACAACAGAGACGTAGCAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGATAGTC
AACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATGTTCCAAATGTTGCAGACAATTGGACATTTTGATGCTACCCAAGTAACGCAGATGGCCGAGTTCAT
GGTAATCGACGACAGATCGACCTACAACGCCATTTTTGGGAGACCCATTATCCACTCATTTCGGGTTGTCCCCTCAACATTGCATCAAGTCTTGAAGTACTCAACCACGA
ATGGAGTGGGCATGGTCCAAGGTGAGCAAAAAACCTCGCGGGAGTGTTATGCATCCGCGCTTAAAGGGTCGGCGGTATGCGCCCTGGAAGAGCAAGCCAATCGTGGCAAG
CTGCAAGGGTCCGAGACAGACCTGCCCAAGGAAGGTAAAAGGTTGTTCTCCCCGCCAACAGAAGAGCTCGAGCTCGTTCCTTTACTTACTTCTGAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGAAAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAAGAAAG
AGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATGGCGGATATTCCACCTCGTGATCCGGTTGATCCACCTACTGTAAATGGTAATATGAGGG
ATCATGCAAGAAATGATGAATTCAACCATATCCAGATGGCGGACAACAGAGACGTAGCAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGATAGTC
AACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATGTTCCAAATGTTGCAGACAATTGGACATTTTGATGCTACCCAAGTAACGCAGATGGCCGAGTTCAT
GGTAATCGACGACAGATCGACCTACAACGCCATTTTTGGGAGACCCATTATCCACTCATTTCGGGTTGTCCCCTCAACATTGCATCAAGTCTTGAAGTACTCAACCACGA
ATGGAGTGGGCATGGTCCAAGGTGAGCAAAAAACCTCGCGGGAGTGTTATGCATCCGCGCTTAAAGGGTCGGCGGTATGCGCCCTGGAAGAGCAAGCCAATCGTGGCAAG
CTGCAAGGGTCCGAGACAGACCTGCCCAAGGAAGGTAAAAGGTTGTTCTCCCCGCCAACAGAAGAGCTCGAGCTCGTTCCTTTACTTACTTCTGAAAAATAA
Protein sequenceShow/hide protein sequence
MSTRSFLLPLDPEIERTLRKTRKEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPTVNGNMRDHARNDEFNHIQMADNRDVAMREYAATAFQNFDSGIV
NPIPAHANFELKPMMFQMLQTIGHFDATQVTQMAEFMVIDDRSTYNAIFGRPIIHSFRVVPSTLHQVLKYSTTNGVGMVQGEQKTSRECYASALKGSAVCALEEQANRGK
LQGSETDLPKEGKRLFSPPTEELELVPLLTSEK