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Moc05g22190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr5:15926607..15927965
RNA-Seq ExpressionMoc05g22190
SyntenyMoc05g22190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]4.4e-0763.83Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS
        MSK+CVNK+VMVIRNG++DS D C+++DA  EEES AH DE+I+  S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]6.4e-0661.7Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS
        MSK+CVNK+VMVIRNG++DS D  +++DA  EEES AH DE+I+  S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS

XP_022153198.1 uncharacterized protein LOC111020753 [Momordica charantia]2.4e-0563.41Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE
        MSK+CVNK VMVIRNGVVDS+D CE++D +FEE  + +++E
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE

XP_022158838.1 uncharacterized protein LOC111025303 [Momordica charantia]4.2e-0563.41Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE
        MSK+CVNK VMVIRNGVVDS+D CE++D  FEE  + +++E
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE

XP_023520950.1 uncharacterized protein LOC111784506, partial [Cucurbita pepo subsp. pepo]7.1e-0548.44Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQ----DSKHYDVDERSSNSS
        MSKECVNK+VMVIRNG++DS+D CE +D++  EE  A+ DE++++      K  D +E+  N S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQ----DSKHYDVDERSSNSS

TrEMBL top hitse value%identityAlignment
A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein2.2e-0763.83Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS
        MSK+CVNK+VMVIRNG++DS D C+++DA  EEES AH DE+I+  S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein3.1e-0661.7Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS
        MSK+CVNK+VMVIRNG++DS D  +++DA  EEES AH DE+I+  S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDS

A0A5D3C8C6 CCHC-type domain-containing protein4.5e-0558.33Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHV-DEFIKQDS
        MSK+C+NK VMV+RNGV+DS D CE+ DA+ EEE +  V DE+I++ S
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHV-DEFIKQDS

A0A6J1DGU9 uncharacterized protein LOC1110207531.2e-0563.41Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE
        MSK+CVNK VMVIRNGVVDS+D CE++D +FEE  + +++E
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE

A0A6J1DX75 uncharacterized protein LOC1110253032.0e-0563.41Show/hide
Query:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE
        MSK+CVNK VMVIRNGVVDS+D CE++D  FEE  + +++E
Subjt:  MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAAGAATGTGTCAATAAAGAAGTCATGGTAATAAGAAATGGTGTCGTTGATTCAAATGATGGTTGTGAGAAATATGATGCAAAATTTGAGGAAGAATCTAAAGC
ACATGTTGATGAATTTATTAAACAAGATAGCAAACATTATGATGTTGATGAAAGAAGTTCCAACTCTTCAAATCAAGTGTGGTCGAACACAAGTAACGATGGAAGCTATG
ATGGAGCCAACGAGAGTAACCATGAACAAAAGAAACCTAAAGTGAACGGCATTGTGGAAAAGTATTTGTCTAAGAAGTCGCATAAAGAATTTCATGGCCAAGAACGCAGA
ATTGTATGTGCCTTGGCAGATTGCACCCCTTGGGAGTTTGTGAAGTCAAAGCTTGTCAAATGTCATCCAAATGTGAAGCGCCTCCTACAGCACGTAGATAAGACCATTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAAGAATGTGTCAATAAAGAAGTCATGGTAATAAGAAATGGTGTCGTTGATTCAAATGATGGTTGTGAGAAATATGATGCAAAATTTGAGGAAGAATCTAAAGC
ACATGTTGATGAATTTATTAAACAAGATAGCAAACATTATGATGTTGATGAAAGAAGTTCCAACTCTTCAAATCAAGTGTGGTCGAACACAAGTAACGATGGAAGCTATG
ATGGAGCCAACGAGAGTAACCATGAACAAAAGAAACCTAAAGTGAACGGCATTGTGGAAAAGTATTTGTCTAAGAAGTCGCATAAAGAATTTCATGGCCAAGAACGCAGA
ATTGTATGTGCCTTGGCAGATTGCACCCCTTGGGAGTTTGTGAAGTCAAAGCTTGTCAAATGTCATCCAAATGTGAAGCGCCTCCTACAGCACGTAGATAAGACCATTTG
A
Protein sequenceShow/hide protein sequence
MSKECVNKEVMVIRNGVVDSNDGCEKYDAKFEEESKAHVDEFIKQDSKHYDVDERSSNSSNQVWSNTSNDGSYDGANESNHEQKKPKVNGIVEKYLSKKSHKEFHGQERR
IVCALADCTPWEFVKSKLVKCHPNVKRLLQHVDKTI