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Moc05g22460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:16058321..16059891
RNA-Seq ExpressionMoc05g22460
SyntenyMoc05g22460
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131660.1 uncharacterized protein LOC111004785 [Momordica charantia]1.2e-1090.91Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRARNYEDPN RGEEAADPNVP  VP GVAPPVPQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

XP_022149380.1 uncharacterized protein LOC111017810 [Momordica charantia]1.6e-1088.64Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPN RGE AADPNVPP VPGGVAPP PQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]5.5e-1188.64Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPNLRGE AADPNV P VPGGV PPVPQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

XP_022157398.1 uncharacterized protein LOC111024105 [Momordica charantia]1.4e-1189.13Show/hide
Query:  QTMAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        +TMAFRRNTRA NYEDPN RGEEAADPNV  TVPGGVAPPVPQAAP
Subjt:  QTMAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

XP_022158212.1 uncharacterized protein LOC111024748 [Momordica charantia]2.1e-1086.36Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPN RGE AADPN+PP VPGGVAPP PQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

TrEMBL top hitse value%identityAlignment
A0A6J1BQB2 uncharacterized protein LOC1110047855.9e-1190.91Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRARNYEDPN RGEEAADPNVP  VP GVAPPVPQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

A0A6J1D5J7 uncharacterized protein LOC1110178107.7e-1188.64Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPN RGE AADPNVPP VPGGVAPP PQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

A0A6J1DQB9 Reverse transcriptase2.6e-1188.64Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPNLRGE AADPNV P VPGGV PPVPQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

A0A6J1DT93 uncharacterized protein LOC1110241056.9e-1289.13Show/hide
Query:  QTMAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        +TMAFRRNTRA NYEDPN RGEEAADPNV  TVPGGVAPPVPQAAP
Subjt:  QTMAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

A0A6J1DWM4 uncharacterized protein LOC1110247481.0e-1086.36Show/hide
Query:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP
        MAFRRNTRA NYEDPN RGE AADPN+PP VPGGVAPP PQAAP
Subjt:  MAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATGTGGAATTAGGAAAGTTATGAAGCGAATGGGTGAGTGTCAGGGTCTCGGGTATAAATGGTCGAAGGCTGATACATCACTAATTGGGTATCGAGGCCTC
GGGTATAAATGGTCGGGGGTCGATACGCTAATATTGGATAAAGATGAGCGTCGGGGCCTCGGGTATAAATGGTCGGGGGTCGATACGCTAAGATTGGATAAAGAT
GAGCGTCGGGGCCTCGGGTATAAATGGTCGGGGGTCGATGCGAGGAGTCTTTTGAAAGGAGAACTATTGGGGCCTTGGACTGTCCTAGAATCTAGGTCGTTAGTG
TACGGTCCTCGTCATCACCAGACAATGGCTTTTCGACGGAACACGAGGGCTCGCAACTACGAGGATCCGAACCTTAGGGGTGAGGAGGCAGCGGATCCAAATGTT
CCTCCGACAGTTCCTGGAGGGGTAGCACCCCCGGTTCCGCAGGCAGCACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATGTGGAATTAGGAAAGTTATGAAGCGAATGGGTGAGTGTCAGGGTCTCGGGTATAAATGGTCGAAGGCTGATACATCACTAATTGGGTATCGAGGCCTC
GGGTATAAATGGTCGGGGGTCGATACGCTAATATTGGATAAAGATGAGCGTCGGGGCCTCGGGTATAAATGGTCGGGGGTCGATACGCTAAGATTGGATAAAGAT
GAGCGTCGGGGCCTCGGGTATAAATGGTCGGGGGTCGATGCGAGGAGTCTTTTGAAAGGAGAACTATTGGGGCCTTGGACTGTCCTAGAATCTAGGTCGTTAGTG
TACGGTCCTCGTCATCACCAGACAATGGCTTTTCGACGGAACACGAGGGCTCGCAACTACGAGGATCCGAACCTTAGGGGTGAGGAGGCAGCGGATCCAAATGTT
CCTCCGACAGTTCCTGGAGGGGTAGCACCCCCGGTTCCGCAGGCAGCACCTTAG
Protein sequenceShow/hide protein sequence
MSCGIRKVMKRMGECQGLGYKWSKADTSLIGYRGLGYKWSGVDTLILDKDERRGLGYKWSGVDTLRLDKDERRGLGYKWSGVDARSLLKGELLGPWTVLESRSLV
YGPRHHQTMAFRRNTRARNYEDPNLRGEEAADPNVPPTVPGGVAPPVPQAAP