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Moc05g22680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111020110
Genome locationchr5:16235427..16236264
RNA-Seq ExpressionMoc05g22680
SyntenyMoc05g22680
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152366.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111020110 [Momordica charantia]1.7e-9872.43Show/hide
Query:  HTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSMIN----
        HTSLPTSSTQAPNATSIPFPP+ENFQHHMVSDSRLA                                  QLPT NIPQ+SEFRA+NPQQLP MIN    
Subjt:  HTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSMIN----

Query:  --------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRM
                            PASVHPYGM N STLFPSL PYYGMGHWVPP NYGMISPRVPPPPQLSFLERGPQAPQLNPNIL TFNMG LKPLEPPRM
Subjt:  --------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRM

Query:  QTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
         TPTNMPMD G EHGGEQEKSHS RLEPGV IGQKR GKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
Subjt:  QTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY

XP_022156936.1 uncharacterized protein LOC111023763 [Momordica charantia]2.4e-8178.22Show/hide
Query:  QLPTLNIPQNSEFRAKNPQQLPSMINP------------------------ASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFL
        QLPTLNIPQNSEFRA+NPQQLP MINP                        ASVHPYGM N STLFPS PPYYGMGHWVPP NYGMISPRVPPPPQL FL
Subjt:  QLPTLNIPQNSEFRAKNPQQLPSMINP------------------------ASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFL

Query:  ERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQ
        ERGPQ PQLNPN L TFNMGHLKPLEPPRM  PTNMPMDAGVEHGGEQEKSH QRLEP +SIGQKR GKEVM DPEI EDGSSRRL PKDSSME RDEEQ
Subjt:  ERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQ

Query:  FY
        FY
Subjt:  FY

XP_022157800.1 protein PAF1 homolog [Momordica charantia]3.3e-7870.98Show/hide
Query:  FPPME-NFQHHMVSDSRLAT--QLPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHW
        FPP +   QH M+S        QLP LNIPQNSEFRA++PQQ P MIN                        PASVHPYGM N STLFPSLPPYY MG+W
Subjt:  FPPME-NFQHHMVSDSRLAT--QLPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHW

Query:  VPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIE
        VPPQNYGMISPRVPPPPQL FLERGPQAPQLNPNIL TFNMG LKPLEPP M  P N+PMD GVEHGGEQEKSH+QRLEP VSIGQKR GKEV+ DPE E
Subjt:  VPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIE

Query:  EDGSSRRLTPKDSSMENRDEEQFY
        +DGSSRRLTPKDS+MENRDEEQFY
Subjt:  EDGSSRRLTPKDSSMENRDEEQFY

XP_022158357.1 uncharacterized protein LOC111024860 [Momordica charantia]3.0e-10071.58Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSM
        MASSSQHTSLPTSST APNATSIPFPP+ENFQHHM SDSRLA                                  QLPTLNIPQNSEFRA+NPQQLP M
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSM

Query:  IN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKP
        IN                        PASVHPYGM N STLFPSLPPYYGMGHW+PPQNYGMISP+VPPPPQL FLERGPQAPQL+PNIL T+NMG LKP
Subjt:  IN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKP

Query:  LEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
        LEPPRM TPTNMPMDAG EHGGEQEK HS RLEPGVSIGQKR GKEVM DPEIEEDGSSRRLTPKDS+MENRDEEQFY
Subjt:  LEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]4.4e-8380.6Show/hide
Query:  LPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLE
        LPTLNIPQNSEFRA++PQQLP MIN                        PASVHPYGM N STLFPSLPPYYGMGHWVPP NYGMISPRVPPPPQL FLE
Subjt:  LPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLE

Query:  RGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQF
        RGPQAPQLNPNIL TFNMGHLKPLEP RM  PTNMPMD G EHGGEQEKSHSQRLEPGVSIGQKR GKEVM DPEIEEDGSSRRLTPKDSSMENRDEEQF
Subjt:  RGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQF

Query:  Y
        Y
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A6J1DHH9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110201108.1e-9972.43Show/hide
Query:  HTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSMIN----
        HTSLPTSSTQAPNATSIPFPP+ENFQHHMVSDSRLA                                  QLPT NIPQ+SEFRA+NPQQLP MIN    
Subjt:  HTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSMIN----

Query:  --------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRM
                            PASVHPYGM N STLFPSL PYYGMGHWVPP NYGMISPRVPPPPQLSFLERGPQAPQLNPNIL TFNMG LKPLEPPRM
Subjt:  --------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRM

Query:  QTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
         TPTNMPMD G EHGGEQEKSHS RLEPGV IGQKR GKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
Subjt:  QTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY

A0A6J1DU32 protein PAF1 homolog1.6e-7870.98Show/hide
Query:  FPPME-NFQHHMVSDSRLAT--QLPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHW
        FPP +   QH M+S        QLP LNIPQNSEFRA++PQQ P MIN                        PASVHPYGM N STLFPSLPPYY MG+W
Subjt:  FPPME-NFQHHMVSDSRLAT--QLPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHW

Query:  VPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIE
        VPPQNYGMISPRVPPPPQL FLERGPQAPQLNPNIL TFNMG LKPLEPP M  P N+PMD GVEHGGEQEKSH+QRLEP VSIGQKR GKEV+ DPE E
Subjt:  VPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIE

Query:  EDGSSRRLTPKDSSMENRDEEQFY
        +DGSSRRLTPKDS+MENRDEEQFY
Subjt:  EDGSSRRLTPKDSSMENRDEEQFY

A0A6J1DWG3 uncharacterized protein LOC1110237631.2e-8178.22Show/hide
Query:  QLPTLNIPQNSEFRAKNPQQLPSMINP------------------------ASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFL
        QLPTLNIPQNSEFRA+NPQQLP MINP                        ASVHPYGM N STLFPS PPYYGMGHWVPP NYGMISPRVPPPPQL FL
Subjt:  QLPTLNIPQNSEFRAKNPQQLPSMINP------------------------ASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFL

Query:  ERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQ
        ERGPQ PQLNPN L TFNMGHLKPLEPPRM  PTNMPMDAGVEHGGEQEKSH QRLEP +SIGQKR GKEVM DPEI EDGSSRRL PKDSSME RDEEQ
Subjt:  ERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQ

Query:  FY
        FY
Subjt:  FY

A0A6J1DX11 uncharacterized protein LOC1110248601.5e-10071.58Show/hide
Query:  MASSSQHTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSM
        MASSSQHTSLPTSST APNATSIPFPP+ENFQHHM SDSRLA                                  QLPTLNIPQNSEFRA+NPQQLP M
Subjt:  MASSSQHTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLAT---------------------------------QLPTLNIPQNSEFRAKNPQQLPSM

Query:  IN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKP
        IN                        PASVHPYGM N STLFPSLPPYYGMGHW+PPQNYGMISP+VPPPPQL FLERGPQAPQL+PNIL T+NMG LKP
Subjt:  IN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKP

Query:  LEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY
        LEPPRM TPTNMPMDAG EHGGEQEK HS RLEPGVSIGQKR GKEVM DPEIEEDGSSRRLTPKDS+MENRDEEQFY
Subjt:  LEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQFY

A0A6J1DY94 uncharacterized protein LOC1110253162.1e-8380.6Show/hide
Query:  LPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLE
        LPTLNIPQNSEFRA++PQQLP MIN                        PASVHPYGM N STLFPSLPPYYGMGHWVPP NYGMISPRVPPPPQL FLE
Subjt:  LPTLNIPQNSEFRAKNPQQLPSMIN------------------------PASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGMISPRVPPPPQLSFLE

Query:  RGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQF
        RGPQAPQLNPNIL TFNMGHLKPLEP RM  PTNMPMD G EHGGEQEKSHSQRLEPGVSIGQKR GKEVM DPEIEEDGSSRRLTPKDSSMENRDEEQF
Subjt:  RGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDSSMENRDEEQF

Query:  Y
        Y
Subjt:  Y

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTCAACATACTTCACTTCCTACCTCTTCTACTCAAGCTCCAAATGCCACAAGCATTCCCTTTCCACCAATGGAGAACTTCCAACACCACATG
GTTTCAGATTCTAGGCTAGCTACTCAACTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTAAAAATCCTCAACAACTTCCTTCAATGATCAATCCG
GCTAGTGTTCATCCTTATGGAATGCAAAACTCATCTACTCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACAAAATTATGGGATG
ATTTCACCTAGGGTTCCCCCACCACCTCAACTTTCATTCCTAGAAAGAGGACCTCAAGCACCACAGTTGAACCCTAACATATTGGGTACCTTCAACATGGGACAT
CTAAAACCCTTAGAGCCCCCTAGGATGCAAACCCCAACCAATATGCCAATGGATGCAGGAGTTGAGCATGGAGGAGAGCAAGAGAAGAGCCATAGCCAGAGGCTA
GAGCCCGGGGTGTCGATAGGGCAAAAGAGGAATGGCAAGGAGGTGATGATAGACCCAGAAATTGAGGAAGATGGGAGTAGTAGGCGTCTGACGCCTAAGGATTCA
TCAATGGAGAACAGGGACGAGGAGCAGTTTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTCAACATACTTCACTTCCTACCTCTTCTACTCAAGCTCCAAATGCCACAAGCATTCCCTTTCCACCAATGGAGAACTTCCAACACCACATG
GTTTCAGATTCTAGGCTAGCTACTCAACTACCCACCCTTAATATACCTCAAAACAGTGAGTTTAGGGCTAAAAATCCTCAACAACTTCCTTCAATGATCAATCCG
GCTAGTGTTCATCCTTATGGAATGCAAAACTCATCTACTCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACAAAATTATGGGATG
ATTTCACCTAGGGTTCCCCCACCACCTCAACTTTCATTCCTAGAAAGAGGACCTCAAGCACCACAGTTGAACCCTAACATATTGGGTACCTTCAACATGGGACAT
CTAAAACCCTTAGAGCCCCCTAGGATGCAAACCCCAACCAATATGCCAATGGATGCAGGAGTTGAGCATGGAGGAGAGCAAGAGAAGAGCCATAGCCAGAGGCTA
GAGCCCGGGGTGTCGATAGGGCAAAAGAGGAATGGCAAGGAGGTGATGATAGACCCAGAAATTGAGGAAGATGGGAGTAGTAGGCGTCTGACGCCTAAGGATTCA
TCAATGGAGAACAGGGACGAGGAGCAGTTTTATTAA
Protein sequenceShow/hide protein sequence
MASSSQHTSLPTSSTQAPNATSIPFPPMENFQHHMVSDSRLATQLPTLNIPQNSEFRAKNPQQLPSMINPASVHPYGMQNSSTLFPSLPPYYGMGHWVPPQNYGM
ISPRVPPPPQLSFLERGPQAPQLNPNILGTFNMGHLKPLEPPRMQTPTNMPMDAGVEHGGEQEKSHSQRLEPGVSIGQKRNGKEVMIDPEIEEDGSSRRLTPKDS
SMENRDEEQFY