CuGenDBv2

Gene ID	Moc05g22840
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr5:16325260..16325694
RNA-Seq Expression	Moc05g22840
Synteny	Moc05g22840
Gene Ontology terms	GO:0006807 - nitrogen compound metabolic process (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0044237 - cellular metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0004672 - protein kinase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8655985.1 hypothetical protein F3Y22_tig00117012pilonHSYRG00199 [Hibiscus syriacus]

1.4e-29

53.1

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+ +LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

KAE8717380.1 hypothetical protein F3Y22_tig00110050pilonHSYRG00143 [Hibiscus syriacus]

6.3e-30

53.1

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

KAE8736181.1 hypothetical protein F3Y22_tig00000132pilonHSYRG00093 [Hibiscus syriacus]

1.8e-29

52.41

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        ++K  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]

7.1e-50

85.25

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLSNLNSIIFELE IEVKIDDEDK LRLILSLP SY+HMK ILM G DTLN  E  SKLLS+ER+LKSEGRTSHEDSALV SNWKKKKD V
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPNK
        QKKACCW CGQSGHMKKDCPN+
Subjt:  QKKACCWECGQSGHMKKDCPNK

XP_039060075.1 G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Hibiscus syriacus]

1.1e-29

52.41

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ E+E I V+IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

TrEMBL top hits

e value

%identity

Alignment

A0A6A2WJ15 CCHC-type domain-containing protein

6.8e-30

53.1

Show/hide

Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+ +LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

A0A6A3BK59 CCHC-type domain-containing protein

3.0e-30

53.1

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

A0A6A3CWI3 CCHC-type domain-containing protein

2.6e-29

52.41

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        +KK  CW CGQ GH+KKDC N     + G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

A0A6A3DA47 CCHC-type domain-containing protein

8.9e-30

52.41

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLS LN I+ ELE I V+IDDEDK LRLI SLP SY+HM+++LM G + +N  E  SKL+S+ER+LK+    S E  AL     +KK    
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD
        ++K  CW CGQ GH+KKDC N    S+ G +SDA +V + + +DD
Subjt:  QKKACCWECGQSGHMKKDCPN-KVGSSKGYESDADSVSLIKGDDD

A0A6J1CG82 uncharacterized protein LOC111010521

3.5e-50

85.25

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV
        MEEG KISDHLSNLNSIIFELE IEVKIDDEDK LRLILSLP SY+HMK ILM G DTLN  E  SKLLS+ER+LKSEGRTSHEDSALV SNWKKKKD V
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFV

Query:  QKKACCWECGQSGHMKKDCPNK
        QKKACCW CGQSGHMKKDCPN+
Subjt:  QKKACCWECGQSGHMKKDCPNK

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

3.6e-12

29.01

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Query:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLK----------SEGR-----TSHED
        M EG     HL+  N +I +L  + VKI++EDK + L+ SLP SY ++ + ++ G  T+   +  S LL  E+  K          +EGR      S  +
Subjt:  MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLK----------SEGR-----TSHED

Query:  SALVASNWKKKKDFVQKKACCWECGQSGHMKKDCPNK---VGSSKGYESDADSVSLIKGDDD
             +  K K     +   C+ C Q GH K+DCPN     G + G ++D ++ ++++ +D+
Subjt:  SALVASNWKKKKDFVQKKACCWECGQSGHMKKDCPNK---VGSSKGYESDADSVSLIKGDDD

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAGGAAGGTGCGAAAATTTCGGATCATCTGAGTAATCTCAATAGCATCATCTTTGAGCTAGAGGAGATCGAAGTGAAGATAGATGATGAAGATAAGACACTCAGGCT
CATCTTATCACTTCCACCTTCTTATAAACACATGAAGTCGATCTTGATGTGTGGGAATGATACTTTGAATTCTTTTGAGGCTGCTAGTAAACTGTTGTCAAAGGAAAGAA
AGTTGAAGAGTGAAGGTCGTACTTCACATGAAGATTCGGCATTGGTAGCTAGTAATTGGAAGAAGAAGAAAGACTTCGTACAAAAGAAAGCTTGTTGCTGGGAATGCGGA
CAGTCTGGACACATGAAGAAAGATTGTCCCAATAAAGTCGGTTCGTCAAAAGGCTATGAGTCGGATGCTGATAGTGTTTCTCTCATCAAGGGAGACGATGATTAG

mRNA sequence

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Protein sequence

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MEEGAKISDHLSNLNSIIFELEEIEVKIDDEDKTLRLILSLPPSYKHMKSILMCGNDTLNSFEAASKLLSKERKLKSEGRTSHEDSALVASNWKKKKDFVQKKACCWECG
QSGHMKKDCPNKVGSSKGYESDADSVSLIKGDDD

Moc05g22840 (gene) of Bitter gourd (OHB3-1) v2 genome