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Moc05g22870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g22870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr5:16349883..16350619
RNA-Seq ExpressionMoc05g22870
SyntenyMoc05g22870
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015896950.1 uncharacterized protein LOC107430602 [Ziziphus jujuba]3.2e-2744.97Show/hide
Query:  WWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITC
        WW  TR+T N+ ENP+G ++FK LF   +FP T R +K  +FI+LEQG L+L+EYE++FE+LS +APHLVDTD +K  +F++GLRPEL  H+AAF L T 
Subjt:  WWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITC

Query:  AEVLQKAQILS---------QDLDNMKSLSK----DGGSKRKFHRGQSS
        +EV+++AQI +         +  D   +       +G  KR F R +++
Subjt:  AEVLQKAQILS---------QDLDNMKSLSK----DGGSKRKFHRGQSS

XP_015900803.1 uncharacterized protein LOC107433919 [Ziziphus jujuba]4.1e-2246.92Show/hide
Query:  GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFI
        G + WW MT + W++  NP+                T R NK A+FI+L+QGK++L +YE+KF+ELS YAPHLVDTD RKA+KFE+GLR  LR+ +    
Subjt:  GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFI

Query:  LITCAEVLQKAQILSQDLD-NMKSLSKDGG
        L T  +VLQ+AQIL  D + +MK+  K+ G
Subjt:  LITCAEVLQKAQILSQDLD-NMKSLSKDGG

XP_022155935.1 uncharacterized protein LOC111022935 [Momordica charantia]5.2e-11095.28Show/hide
Query:  MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD----------GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF
        MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD          GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF
Subjt:  MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD----------GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF

Query:  PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF
        PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF
Subjt:  PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF

Query:  HRGQSSVTLIRE
        HRGQSSVTLIRE
Subjt:  HRGQSSVTLIRE

XP_022158216.1 uncharacterized protein LOC111024753 [Momordica charantia]3.9e-5768.36Show/hide
Query:  PQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDG-------VNKWWNMTRKTWNIAE-NPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYE
        PQN +TNRNA AND VN + +QFR LHPPSFDG         +W       ++  E N    DRFKELF+ KFFP TARQNKEA+FIKLEQG+L  IEYE
Subjt:  PQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDG-------VNKWWNMTRKTWNIAE-NPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYE

Query:  KKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKFHRG
        KKFEELSH APHLV+T+WRKAR+FERGLRPEL+KHV AF L+T AEVLQ  QILSQDLDN KSL KDGGSKRKFH G
Subjt:  KKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKFHRG

XP_022863082.1 uncharacterized protein LOC111383233 [Olea europaea var. sylvestris]2.8e-2336.87Show/hide
Query:  AVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDGV---------------NKWWNMTRKTWNIA-ENPMGSDRFKELFYGKFFPLTAR
        AV D  +      PQN +TN N  ++     VVEQF    PP+F+G+                 WW    +T   A ++ +   RFKE    K+FP   R
Subjt:  AVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDGV---------------NKWWNMTRKTWNIA-ENPMGSDRFKELFYGKFFPLTAR

Query:  QNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQ--DLDNMKSLSKDGGSKRKFH
          KE DF++L+QGK++LI+YE+KFE+LS Y  HLVDT  +KAR+FE GLRPE+   +A+    + ++VLQ+A  +S   ++D     + +   KRK++
Subjt:  QNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQ--DLDNMKSLSKDGGSKRKFH

TrEMBL top hitse value%identityAlignment
A0A2N9GDM1 Uncharacterized protein7.0e-2044.37Show/hide
Query:  KWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILIT
        +WW  T +T       +   +F +LF  ++FP + R  KEA+FI++EQG  S+ EYE+KF ELS +APH+VD + RKAR FERGLR E++  V+ F L T
Subjt:  KWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILIT

Query:  CAEVLQKAQILSQDLDNMKSLSKDGGSKRK-----FHRGQSS
         AEV+ +A I  +   N K LSK    +RK     F +G+SS
Subjt:  CAEVLQKAQILSQDLDNMKSLSKDGGSKRK-----FHRGQSS

A0A6J1DNX0 uncharacterized protein LOC1110229352.5e-11095.28Show/hide
Query:  MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD----------GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF
        MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD          GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF
Subjt:  MPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFD----------GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFF

Query:  PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF
        PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF
Subjt:  PLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKF

Query:  HRGQSSVTLIRE
        HRGQSSVTLIRE
Subjt:  HRGQSSVTLIRE

A0A6J1E0B5 uncharacterized protein LOC1110247531.9e-5768.36Show/hide
Query:  PQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDG-------VNKWWNMTRKTWNIAE-NPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYE
        PQN +TNRNA AND VN + +QFR LHPPSFDG         +W       ++  E N    DRFKELF+ KFFP TARQNKEA+FIKLEQG+L  IEYE
Subjt:  PQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDG-------VNKWWNMTRKTWNIAE-NPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYE

Query:  KKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKFHRG
        KKFEELSH APHLV+T+WRKAR+FERGLRPEL+KHV AF L+T AEVLQ  QILSQDLDN KSL KDGGSKRKFH G
Subjt:  KKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKFHRG

A0A6P4AUI0 uncharacterized protein LOC1074339192.0e-2246.92Show/hide
Query:  GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFI
        G + WW MT + W++  NP+                T R NK A+FI+L+QGK++L +YE+KF+ELS YAPHLVDTD RKA+KFE+GLR  LR+ +    
Subjt:  GVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFI

Query:  LITCAEVLQKAQILSQDLD-NMKSLSKDGG
        L T  +VLQ+AQIL  D + +MK+  K+ G
Subjt:  LITCAEVLQKAQILSQDLD-NMKSLSKDGG

A0A6P4B4I6 uncharacterized protein LOC1074306021.6e-2744.97Show/hide
Query:  WWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITC
        WW  TR+T N+ ENP+G ++FK LF   +FP T R +K  +FI+LEQG L+L+EYE++FE+LS +APHLVDTD +K  +F++GLRPEL  H+AAF L T 
Subjt:  WWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKLEQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITC

Query:  AEVLQKAQILS---------QDLDNMKSLSK----DGGSKRKFHRGQSS
        +EV+++AQI +         +  D   +       +G  KR F R +++
Subjt:  AEVLQKAQILS---------QDLDNMKSLSK----DGGSKRKFHRGQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTGTAAAACAATGCCGCCACAAAGGAATAATAATTGTAGGACTGCAGTTGTTGATGAACCGCAAGATAATATCCCAGTTGTTCCACAAAACCAAAAAACTAACAG
GAATGCTCCAGCCAATGATCGAGTCAATCGTGTGGTGGAACAGTTTAGAATGCTCCATCCACCCTCTTTTGATGGAGTAAACAAATGGTGGAATATGACTCGCAAGACAT
GGAATATCGCTGAAAATCCTATGGGCTCGGATAGGTTCAAGGAGCTTTTCTATGGGAAGTTCTTTCCCCTGACTGCCAGACAGAACAAGGAGGCAGATTTTATCAAGTTA
GAGCAAGGAAAACTGTCCCTGATAGAGTATGAAAAGAAGTTTGAGGAGCTTTCTCACTACGCCCCTCATTTGGTGGACACTGATTGGAGGAAAGCAAGAAAATTTGAAAG
AGGTTTGAGACCAGAATTAAGGAAGCATGTTGCTGCCTTCATATTGATTACGTGTGCCGAGGTGTTGCAAAAAGCTCAGATCTTGTCACAGGATTTGGACAACATGAAGT
CACTTTCCAAGGATGGTGGTTCAAAAAGAAAGTTCCATAGAGGACAAAGTTCGGTCACCCTCATAAGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTGTAAAACAATGCCGCCACAAAGGAATAATAATTGTAGGACTGCAGTTGTTGATGAACCGCAAGATAATATCCCAGTTGTTCCACAAAACCAAAAAACTAACAG
GAATGCTCCAGCCAATGATCGAGTCAATCGTGTGGTGGAACAGTTTAGAATGCTCCATCCACCCTCTTTTGATGGAGTAAACAAATGGTGGAATATGACTCGCAAGACAT
GGAATATCGCTGAAAATCCTATGGGCTCGGATAGGTTCAAGGAGCTTTTCTATGGGAAGTTCTTTCCCCTGACTGCCAGACAGAACAAGGAGGCAGATTTTATCAAGTTA
GAGCAAGGAAAACTGTCCCTGATAGAGTATGAAAAGAAGTTTGAGGAGCTTTCTCACTACGCCCCTCATTTGGTGGACACTGATTGGAGGAAAGCAAGAAAATTTGAAAG
AGGTTTGAGACCAGAATTAAGGAAGCATGTTGCTGCCTTCATATTGATTACGTGTGCCGAGGTGTTGCAAAAAGCTCAGATCTTGTCACAGGATTTGGACAACATGAAGT
CACTTTCCAAGGATGGTGGTTCAAAAAGAAAGTTCCATAGAGGACAAAGTTCGGTCACCCTCATAAGAGAGTAG
Protein sequenceShow/hide protein sequence
MLCKTMPPQRNNNCRTAVVDEPQDNIPVVPQNQKTNRNAPANDRVNRVVEQFRMLHPPSFDGVNKWWNMTRKTWNIAENPMGSDRFKELFYGKFFPLTARQNKEADFIKL
EQGKLSLIEYEKKFEELSHYAPHLVDTDWRKARKFERGLRPELRKHVAAFILITCAEVLQKAQILSQDLDNMKSLSKDGGSKRKFHRGQSSVTLIRE